RNA–Protein interactions for RNA: ENST00000526919.5

UBXN1-207, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-207ENST00000526919 SF3B3Q15393 1217 aaKnown RBP21.08■□□□□ 0.97
UBXN1-207ENST00000526919 RASAL3Q86YV0 1011 aa21.08■□□□□ 0.97
UBXN1-207ENST00000526919 HPS5Q9UPZ3 1129 aa21.08■□□□□ 0.97
UBXN1-207ENST00000526919 REM2Q8IYK8 340 aaPredicted RBP21.07■□□□□ 0.96
UBXN1-207ENST00000526919 EYA3Q99504 573 aa21.07■□□□□ 0.96
UBXN1-207ENST00000526919 MAPK8IP3Q9UPT6 1336 aa21.06■□□□□ 0.96
UBXN1-207ENST00000526919 TBC1D16Q8TBP0 767 aa21.06■□□□□ 0.96
UBXN1-207ENST00000526919 FAM89AQ96GI7 184 aa21.06■□□□□ 0.96
UBXN1-207ENST00000526919 PNNQ9H307 717 aaKnown RBP21.06■□□□□ 0.96
UBXN1-207ENST00000526919 BABAM1Q9NWV8 329 aa21.06■□□□□ 0.96
UBXN1-207ENST00000526919 PSME4Q14997 1843 aa21.05■□□□□ 0.96
UBXN1-207ENST00000526919 RIPK4P57078 832 aa21.04■□□□□ 0.96
UBXN1-207ENST00000526919 ANGEL2Q5VTE6 544 aaKnown RBP21.04■□□□□ 0.96
UBXN1-207ENST00000526919 ISCA1Q9BUE6 129 aa21.04■□□□□ 0.96
UBXN1-207ENST00000526919 PAPPA2Q9BXP8 1791 aa21.04■□□□□ 0.96
UBXN1-207ENST00000526919 SCARF1Q14162 830 aa21.03■□□□□ 0.96
UBXN1-207ENST00000526919 PKN2Q16513 984 aaKnown RBP21.03■□□□□ 0.96
UBXN1-207ENST00000526919 ZC3H12CQ9C0D7 883 aaKnown RBP21.03■□□□□ 0.96
UBXN1-207ENST00000526919 ZNF280AP59817 542 aaPredicted RBP21.02■□□□□ 0.96
UBXN1-207ENST00000526919 RPS8P62241 208 aaKnown RBP21.02■□□□□ 0.96
UBXN1-207ENST00000526919 KRT24Q2M2I5 525 aa21.02■□□□□ 0.96
UBXN1-207ENST00000526919 PLBD2Q8NHP8 589 aa21.02■□□□□ 0.96
UBXN1-207ENST00000526919 ZNF296Q8WUU4 475 aaPredicted RBP21.02■□□□□ 0.96
UBXN1-207ENST00000526919 HDAC9Q9UKV0 1011 aa21.02■□□□□ 0.96
UBXN1-207ENST00000526919 ATP5J2-PTCD1G3V325 749 aa21.01■□□□□ 0.95
UBXN1-207ENST00000526919 TBC1D8O95759 1140 aa21.01■□□□□ 0.95
UBXN1-207ENST00000526919 FKBP1BP68106 108 aa21.01■□□□□ 0.95
UBXN1-207ENST00000526919 RTL5Q5HYW3 569 aaPredicted RBP21.01■□□□□ 0.95
UBXN1-207ENST00000526919 ANKRD13DQ6ZTN6 518 aa21.01■□□□□ 0.95
UBXN1-207ENST00000526919 MOB2Q70IA6 237 aa21.01■□□□□ 0.95
UBXN1-207ENST00000526919 PODXL2Q9NZ53 605 aa21.01■□□□□ 0.95
UBXN1-207ENST00000526919 RSBN1LQ6PCB5 846 aaPredicted RBP21■□□□□ 0.95
UBXN1-207ENST00000526919 AGBL3Q8NEM8 1001 aa21■□□□□ 0.95
UBXN1-207ENST00000526919 CHPF2Q9P2E5 772 aa21■□□□□ 0.95
UBXN1-207ENST00000526919 ZNF609O15014 1411 aa20.99■□□□□ 0.95
UBXN1-207ENST00000526919 G3V3G9 751 aa20.99■□□□□ 0.95
UBXN1-207ENST00000526919 DCAF8Q5TAQ9 597 aa20.99■□□□□ 0.95
UBXN1-207ENST00000526919 UBE2Q2LH0YL09 131 aa20.98■□□□□ 0.95
UBXN1-207ENST00000526919 IRS4O14654 1257 aaPredicted RBP20.98■□□□□ 0.95
UBXN1-207ENST00000526919 GMLQ99445 158 aa20.98■□□□□ 0.95
UBXN1-207ENST00000526919 SCAF8Q9UPN6 1271 aaKnown RBP20.98■□□□□ 0.95
UBXN1-207ENST00000526919 UFL1O94874 794 aa20.97■□□□□ 0.95
UBXN1-207ENST00000526919 TMPOP42166 694 aaKnown RBP20.97■□□□□ 0.95
UBXN1-207ENST00000526919 MYOZ2Q9NPC6 264 aa20.97■□□□□ 0.95
UBXN1-207ENST00000526919 SEC31BQ9NQW1 1179 aa20.97■□□□□ 0.95
UBXN1-207ENST00000526919 ANKIB1Q9P2G1 1089 aa20.97■□□□□ 0.95
UBXN1-207ENST00000526919 GGA1Q9UJY5 639 aa20.97■□□□□ 0.95
UBXN1-207ENST00000526919 PITPNM2Q9BZ72 1349 aa20.97■□□□□ 0.95
UBXN1-207ENST00000526919 GPR25O00155 361 aa20.96■□□□□ 0.95
UBXN1-207ENST00000526919 TM4SF4P48230 202 aa20.96■□□□□ 0.95
UBXN1-207ENST00000526919 TRIM28Q13263 835 aaKnown RBP20.96■□□□□ 0.95
UBXN1-207ENST00000526919 PRAMEF18Q5VWM3 479 aa20.96■□□□□ 0.95
UBXN1-207ENST00000526919 CHL1O00533 1208 aa20.95■□□□□ 0.94
UBXN1-207ENST00000526919 USP17L8P0C7I0 530 aa20.95■□□□□ 0.94
UBXN1-207ENST00000526919 FBXO46Q6PJ61 603 aaPredicted RBP20.95■□□□□ 0.94
UBXN1-207ENST00000526919 LMOD3Q0VAK6 560 aa20.94■□□□□ 0.94
UBXN1-207ENST00000526919 NOM1Q5C9Z4 860 aaKnown RBP20.94■□□□□ 0.94
UBXN1-207ENST00000526919 HDGFL1Q5TGJ6 251 aa20.94■□□□□ 0.94
UBXN1-207ENST00000526919 DBF4Q9UBU7 674 aaPredicted RBP20.93■□□□□ 0.94
UBXN1-207ENST00000526919 USP17L3A6NCW0 530 aa20.92■□□□□ 0.94
UBXN1-207ENST00000526919 USP17L4A6NCW7 530 aa20.92■□□□□ 0.94
UBXN1-207ENST00000526919 NBPF9Q3BBW0 867 aa20.92■□□□□ 0.94
UBXN1-207ENST00000526919 USP17L1Q7RTZ2 530 aa20.92■□□□□ 0.94
UBXN1-207ENST00000526919 LAS1LQ9Y4W2 734 aaKnown RBP20.92■□□□□ 0.94
UBXN1-207ENST00000526919 ZNF646O15015 1829 aaPredicted RBP20.92■□□□□ 0.94
UBXN1-207ENST00000526919 MKRN3Q13064 507 aaKnown RBP20.91■□□□□ 0.94
UBXN1-207ENST00000526919 TTLL12Q14166 644 aaPredicted RBP20.91■□□□□ 0.94
UBXN1-207ENST00000526919 ZBTB38Q8NAP3 1195 aaPredicted RBP20.91■□□□□ 0.94
UBXN1-207ENST00000526919 GCC1Q96CN9 775 aa20.91■□□□□ 0.94
UBXN1-207ENST00000526919 R3HDMLQ9H3Y0 253 aa20.91■□□□□ 0.94
UBXN1-207ENST00000526919 FKTNO75072 461 aa20.9■□□□□ 0.94
UBXN1-207ENST00000526919 NEUROD2Q15784 382 aa20.9■□□□□ 0.94
UBXN1-207ENST00000526919 PODNQ7Z5L7 613 aa20.9■□□□□ 0.94
UBXN1-207ENST00000526919 HYPKQ9NX55 129 aa20.9■□□□□ 0.94
UBXN1-207ENST00000526919 HOXB7P09629 217 aa20.89■□□□□ 0.93
UBXN1-207ENST00000526919 CFHR5Q9BXR6 569 aa20.89■□□□□ 0.93
UBXN1-207ENST00000526919 XDHP47989 1333 aa20.88■□□□□ 0.93
UBXN1-207ENST00000526919 WTIPA6NIX2 430 aaPredicted RBP20.88■□□□□ 0.93
UBXN1-207ENST00000526919 CCDC152Q4G0S7 254 aa20.88■□□□□ 0.93
UBXN1-207ENST00000526919 ATP2B4P23634 1241 aa20.87■□□□□ 0.93
UBXN1-207ENST00000526919 PTPN12Q05209 780 aaKnown RBP20.87■□□□□ 0.93
UBXN1-207ENST00000526919 SREBF2Q12772 1141 aa20.87■□□□□ 0.93
UBXN1-207ENST00000526919 RIC3Q7Z5B4 369 aa20.87■□□□□ 0.93
UBXN1-207ENST00000526919 CCDC85AQ96PX6 553 aaPredicted RBP20.87■□□□□ 0.93
UBXN1-207ENST00000526919 MXD3Q9BW11 206 aa20.87■□□□□ 0.93
UBXN1-207ENST00000526919 TRIM35Q9UPQ4 493 aa20.87■□□□□ 0.93
UBXN1-207ENST00000526919 SPEF2Q9C093 1822 aa20.86■□□□□ 0.93
UBXN1-207ENST00000526919 WNT10BO00744 389 aa20.86■□□□□ 0.93
UBXN1-207ENST00000526919 PDE8AO60658 829 aa20.86■□□□□ 0.93
UBXN1-207ENST00000526919 HSP90B1P14625 803 aaKnown RBP20.86■□□□□ 0.93
UBXN1-207ENST00000526919 NF2P35240 595 aa20.86■□□□□ 0.93
UBXN1-207ENST00000526919 HABP4Q5JVS0 413 aaKnown RBP20.86■□□□□ 0.93
UBXN1-207ENST00000526919 JARID2Q92833 1246 aaPredicted RBP20.86■□□□□ 0.93
UBXN1-207ENST00000526919 MKI67P46013 3256 aaKnown RBP20.86■□□□□ 0.93
UBXN1-207ENST00000526919 PCCAP05165 728 aaPredicted RBP20.85■□□□□ 0.93
UBXN1-207ENST00000526919 DACT2Q5SW24 774 aa20.85■□□□□ 0.93
UBXN1-207ENST00000526919 DUSP27Q5VZP5 1158 aa20.85■□□□□ 0.93
UBXN1-207ENST00000526919 ANKRD18AQ8IVF6 992 aa20.85■□□□□ 0.93
UBXN1-207ENST00000526919 HTTP42858 3142 aa20.84■□□□□ 0.93
UBXN1-207ENST00000526919 PRKG1Q13976 671 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms