RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 DPP8Q6V1X1 898 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-202ENST00000526280 PODXL2Q9NZ53 605 aa16.17■□□□□ 0.18
SMPD1-202ENST00000526280 NSFL1CQ9UNZ2 370 aaKnown RBP16.17■□□□□ 0.18
SMPD1-202ENST00000526280 MTX1Q13505 466 aa16.16■□□□□ 0.18
SMPD1-202ENST00000526280 C9orf131Q5VYM1 1079 aa16.16■□□□□ 0.18
SMPD1-202ENST00000526280 LDHAL6AQ6ZMR3 332 aa16.16■□□□□ 0.18
SMPD1-202ENST00000526280 CHMP4BQ9H444 224 aaKnown RBP16.16■□□□□ 0.18
SMPD1-202ENST00000526280 ZNF277Q9NRM2 450 aaPredicted RBP16.16■□□□□ 0.18
SMPD1-202ENST00000526280 SPEF2Q9C093 1822 aa16.15■□□□□ 0.18
SMPD1-202ENST00000526280 SUPT20HQ8NEM7 779 aa16.15■□□□□ 0.18
SMPD1-202ENST00000526280 ZBTB40Q9NUA8 1239 aa16.15■□□□□ 0.18
SMPD1-202ENST00000526280 RNF181Q9P0P0 153 aa16.15■□□□□ 0.18
SMPD1-202ENST00000526280 ANKIB1Q9P2G1 1089 aa16.15■□□□□ 0.18
SMPD1-202ENST00000526280 CCDC88AQ3V6T2 1871 aa16.14■□□□□ 0.17
SMPD1-202ENST00000526280 XDHP47989 1333 aa16.14■□□□□ 0.17
SMPD1-202ENST00000526280 IARSP41252 1262 aaKnown RBP16.14■□□□□ 0.17
SMPD1-202ENST00000526280 PTPN12Q05209 780 aaKnown RBP16.14■□□□□ 0.17
SMPD1-202ENST00000526280 KLHDC4Q8TBB5 520 aa16.14■□□□□ 0.17
SMPD1-202ENST00000526280 TBC1D16Q8TBP0 767 aa16.14■□□□□ 0.17
SMPD1-202ENST00000526280 PUS3Q9BZE2 481 aaKnown RBP16.14■□□□□ 0.17
SMPD1-202ENST00000526280 ANKRD2Q9GZV1 360 aa16.14■□□□□ 0.17
SMPD1-202ENST00000526280 VPS33BQ9H267 617 aa16.14■□□□□ 0.17
SMPD1-202ENST00000526280 C1orf115Q9H7X2 142 aa16.14■□□□□ 0.17
SMPD1-202ENST00000526280 CNNM1Q9NRU3 951 aa16.14■□□□□ 0.17
SMPD1-202ENST00000526280 POLLQ9UGP5 575 aa16.14■□□□□ 0.17
SMPD1-202ENST00000526280 RIPOR2Q9Y4F9 1068 aa16.14■□□□□ 0.17
SMPD1-202ENST00000526280 SUPT16HQ9Y5B9 1047 aaKnown RBP16.14■□□□□ 0.17
SMPD1-202ENST00000526280 SRGAP3O43295 1099 aa16.13■□□□□ 0.17
SMPD1-202ENST00000526280 ATP8B2P98198 1209 aa16.13■□□□□ 0.17
SMPD1-202ENST00000526280 CHRNDQ07001 517 aa16.13■□□□□ 0.17
SMPD1-202ENST00000526280 GGA1Q9UJY5 639 aa16.13■□□□□ 0.17
SMPD1-202ENST00000526280 DUOX1Q9NRD9 1551 aa16.12■□□□□ 0.17
SMPD1-202ENST00000526280 LTBP1Q14766 1721 aa16.12■□□□□ 0.17
SMPD1-202ENST00000526280 PNMA6EA0A0J9YXQ4 647 aa16.12■□□□□ 0.17
SMPD1-202ENST00000526280 C6orf229H3BNL8 230 aa16.12■□□□□ 0.17
SMPD1-202ENST00000526280 ATP2B4P23634 1241 aa16.12■□□□□ 0.17
SMPD1-202ENST00000526280 LRRC24Q50LG9 513 aa16.12■□□□□ 0.17
SMPD1-202ENST00000526280 COPRSQ9NQ92 184 aa16.12■□□□□ 0.17
SMPD1-202ENST00000526280 UFL1O94874 794 aa16.11■□□□□ 0.17
SMPD1-202ENST00000526280 FBXO3Q9UK99 471 aa16.11■□□□□ 0.17
SMPD1-202ENST00000526280 LEMD3Q9Y2U8 911 aa16.11■□□□□ 0.17
SMPD1-202ENST00000526280 DICER1Q9UPY3 1922 aaKnown RBP16.11■□□□□ 0.17
SMPD1-202ENST00000526280 WTIPA6NIX2 430 aaPredicted RBP16.1■□□□□ 0.17
SMPD1-202ENST00000526280 EYA2O00167 538 aa16.1■□□□□ 0.17
SMPD1-202ENST00000526280 PPIP5K2O43314 1243 aa16.1■□□□□ 0.17
SMPD1-202ENST00000526280 TAF5LO75529 589 aa16.1■□□□□ 0.17
SMPD1-202ENST00000526280 KIAA2012Q0VF49 1180 aa16.1■□□□□ 0.17
SMPD1-202ENST00000526280 POLA2Q14181 598 aa16.1■□□□□ 0.17
SMPD1-202ENST00000526280 AOC3Q16853 763 aa16.1■□□□□ 0.17
SMPD1-202ENST00000526280 WASHC4Q2M389 1173 aa16.1■□□□□ 0.17
SMPD1-202ENST00000526280 CEP85Q6P2H3 762 aa16.1■□□□□ 0.17
SMPD1-202ENST00000526280 LARGE2Q8N3Y3 721 aa16.1■□□□□ 0.17
SMPD1-202ENST00000526280 HELBQ8NG08 1087 aaPredicted RBP16.1■□□□□ 0.17
SMPD1-202ENST00000526280 SSH3Q8TE77 659 aa16.1■□□□□ 0.17
SMPD1-202ENST00000526280 EYA3Q99504 573 aa16.1■□□□□ 0.17
SMPD1-202ENST00000526280 PA2G4Q9UQ80 394 aaKnown RBP16.1■□□□□ 0.17
SMPD1-202ENST00000526280 MROH5Q6ZUA9 1318 aa16.09■□□□□ 0.17
SMPD1-202ENST00000526280 CIAO1O76071 339 aa16.09■□□□□ 0.17
SMPD1-202ENST00000526280 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
SMPD1-202ENST00000526280 GPR101Q96P66 508 aaPredicted RBP16.09■□□□□ 0.17
SMPD1-202ENST00000526280 ZNF804BA4D1E1 1349 aa16.08■□□□□ 0.17
SMPD1-202ENST00000526280 ZC3H4Q9UPT8 1303 aaKnown RBP16.08■□□□□ 0.17
SMPD1-202ENST00000526280 RPAP2Q8IXW5 612 aaPredicted RBP16.08■□□□□ 0.16
SMPD1-202ENST00000526280 JDP2Q8WYK2 163 aa16.08■□□□□ 0.16
SMPD1-202ENST00000526280 CRBNQ96SW2 442 aa16.08■□□□□ 0.16
SMPD1-202ENST00000526280 ZC3H12CQ9C0D7 883 aaKnown RBP16.08■□□□□ 0.16
SMPD1-202ENST00000526280 SIL1Q9H173 461 aa16.08■□□□□ 0.16
SMPD1-202ENST00000526280 COL4A5P29400 1685 aa16.08■□□□□ 0.16
SMPD1-202ENST00000526280 FZD9O00144 591 aa16.07■□□□□ 0.16
SMPD1-202ENST00000526280 SNAP23O00161 211 aa16.07■□□□□ 0.16
SMPD1-202ENST00000526280 RIMBP2O15034 1052 aa16.07■□□□□ 0.16
SMPD1-202ENST00000526280 IL15P40933 162 aaPredicted RBP16.07■□□□□ 0.16
SMPD1-202ENST00000526280 KCNJ4P48050 445 aa16.07■□□□□ 0.16
SMPD1-202ENST00000526280 METTL24Q5JXM2 366 aa16.07■□□□□ 0.16
SMPD1-202ENST00000526280 VGLL2Q8N8G2 317 aa16.07■□□□□ 0.16
SMPD1-202ENST00000526280 A0A1B0GUL6 1792 aa16.06■□□□□ 0.16
SMPD1-202ENST00000526280 PDE8BO95263 885 aa16.06■□□□□ 0.16
SMPD1-202ENST00000526280 UBE4AQ14139 1066 aa16.06■□□□□ 0.16
SMPD1-202ENST00000526280 SIRT2Q8IXJ6 389 aa16.06■□□□□ 0.16
SMPD1-202ENST00000526280 NIM1KQ8IY84 436 aa16.06■□□□□ 0.16
SMPD1-202ENST00000526280 MED23Q9ULK4 1368 aa16.05■□□□□ 0.16
SMPD1-202ENST00000526280 C15orf52Q6ZUT6 534 aaKnown RBP16.05■□□□□ 0.16
SMPD1-202ENST00000526280 TXNRD3Q86VQ6 643 aa16.05■□□□□ 0.16
SMPD1-202ENST00000526280 ZNRF3Q9ULT6 936 aa16.05■□□□□ 0.16
SMPD1-202ENST00000526280 IRS2Q9Y4H2 1338 aa16.05■□□□□ 0.16
SMPD1-202ENST00000526280 TIAM2Q8IVF5 1701 aa16.05■□□□□ 0.16
SMPD1-202ENST00000526280 KLRK1P26718 216 aa16.04■□□□□ 0.16
SMPD1-202ENST00000526280 G3BP1Q13283 466 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMPD1-202ENST00000526280 DOK7Q18PE1 504 aa16.04■□□□□ 0.16
SMPD1-202ENST00000526280 CEP126Q9P2H0 1117 aa16.04■□□□□ 0.16
SMPD1-202ENST00000526280 NOP58Q9Y2X3 529 aaKnown RBP16.04■□□□□ 0.16
SMPD1-202ENST00000526280 GLTPD2A6NH11 291 aa16.03■□□□□ 0.16
SMPD1-202ENST00000526280 SURF6O75683 361 aaKnown RBP16.03■□□□□ 0.16
SMPD1-202ENST00000526280 ZNF526Q8TF50 670 aaPredicted RBP16.03■□□□□ 0.16
SMPD1-202ENST00000526280 DBNDD1Q9H9R9 158 aa16.03■□□□□ 0.16
SMPD1-202ENST00000526280 ZNF541Q9H0D2 1346 aa16.03■□□□□ 0.16
SMPD1-202ENST00000526280 YDJCA8MPS7 323 aa16.02■□□□□ 0.16
SMPD1-202ENST00000526280 G3V3G9 751 aa16.02■□□□□ 0.16
SMPD1-202ENST00000526280 ECE2O60344 883 aa16.02■□□□□ 0.16
SMPD1-202ENST00000526280 HMMRO75330 724 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms