RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 RPAP2Q8IXW5 612 aaPredicted RBP23.27■■□□□ 1.32
LMO1-203ENST00000524379 SP8Q8IXZ3 490 aa23.27■■□□□ 1.32
LMO1-203ENST00000524379 BSDC1Q9NW68 430 aaPredicted RBP23.27■■□□□ 1.32
LMO1-203ENST00000524379 A0A1B0GUL6 1792 aa23.27■■□□□ 1.32
LMO1-203ENST00000524379 DUOX1Q9NRD9 1551 aa23.27■■□□□ 1.32
LMO1-203ENST00000524379 IGHMBP2P38935 993 aaKnown RBP23.26■■□□□ 1.31
LMO1-203ENST00000524379 ATG9AQ7Z3C6 839 aa23.26■■□□□ 1.31
LMO1-203ENST00000524379 MINPP1Q9UNW1 487 aa23.26■■□□□ 1.31
LMO1-203ENST00000524379 RIPOR2Q9Y4F9 1068 aa23.26■■□□□ 1.31
LMO1-203ENST00000524379 WTIPA6NIX2 430 aaPredicted RBP23.24■■□□□ 1.31
LMO1-203ENST00000524379 GPSM2P81274 684 aa23.24■■□□□ 1.31
LMO1-203ENST00000524379 TAF7LQ5H9L4 462 aa23.24■■□□□ 1.31
LMO1-203ENST00000524379 LDHAL6AQ6ZMR3 332 aa23.24■■□□□ 1.31
LMO1-203ENST00000524379 TMC4Q7Z404 712 aa23.24■■□□□ 1.31
LMO1-203ENST00000524379 SIL1Q9H173 461 aa23.24■■□□□ 1.31
LMO1-203ENST00000524379 EYA2O00167 538 aa23.23■■□□□ 1.31
LMO1-203ENST00000524379 MPHOSPH8Q99549 860 aa23.23■■□□□ 1.31
LMO1-203ENST00000524379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.23■■□□□ 1.31
LMO1-203ENST00000524379 NFKBIEO00221 500 aa23.22■■□□□ 1.31
LMO1-203ENST00000524379 PRELPP51888 382 aa23.22■■□□□ 1.31
LMO1-203ENST00000524379 CHRNDQ07001 517 aa23.22■■□□□ 1.31
LMO1-203ENST00000524379 FER1L6Q2WGJ9 1857 aa23.22■■□□□ 1.31
LMO1-203ENST00000524379 AAMPQ13685 434 aa23.21■■□□□ 1.31
LMO1-203ENST00000524379 CCDC93Q567U6 631 aa23.21■■□□□ 1.31
LMO1-203ENST00000524379 VGLL2Q8N8G2 317 aa23.21■■□□□ 1.31
LMO1-203ENST00000524379 HELBQ8NG08 1087 aaPredicted RBP23.21■■□□□ 1.31
LMO1-203ENST00000524379 CNNM1Q9NRU3 951 aa23.21■■□□□ 1.31
LMO1-203ENST00000524379 NOP58Q9Y2X3 529 aaKnown RBP23.21■■□□□ 1.31
LMO1-203ENST00000524379 CEP350Q5VT06 3117 aa23.21■■□□□ 1.31
LMO1-203ENST00000524379 SNAP23O00161 211 aa23.2■■□□□ 1.3
LMO1-203ENST00000524379 CIAO1O76071 339 aa23.2■■□□□ 1.3
LMO1-203ENST00000524379 TAF5LO75529 589 aa23.19■■□□□ 1.3
LMO1-203ENST00000524379 CC2D2BQ6DHV5 1058 aa23.19■■□□□ 1.3
LMO1-203ENST00000524379 POLLQ9UGP5 575 aa23.19■■□□□ 1.3
LMO1-203ENST00000524379 SURF6O75683 361 aaKnown RBP23.18■■□□□ 1.3
LMO1-203ENST00000524379 SASH1O94885 1247 aa23.18■■□□□ 1.3
LMO1-203ENST00000524379 RASSF7Q02833 373 aa23.18■■□□□ 1.3
LMO1-203ENST00000524379 GPR101Q96P66 508 aaPredicted RBP23.18■■□□□ 1.3
LMO1-203ENST00000524379 PODXL2Q9NZ53 605 aa23.18■■□□□ 1.3
LMO1-203ENST00000524379 FBXO3Q9UK99 471 aa23.18■■□□□ 1.3
LMO1-203ENST00000524379 NSFL1CQ9UNZ2 370 aaKnown RBP23.18■■□□□ 1.3
LMO1-203ENST00000524379 EXOC6BQ9Y2D4 811 aa23.18■■□□□ 1.3
LMO1-203ENST00000524379 KIF3CO14782 793 aa23.17■■□□□ 1.3
LMO1-203ENST00000524379 SOGA3Q5TF21 947 aa23.17■■□□□ 1.3
LMO1-203ENST00000524379 MPNDQ8N594 471 aa23.17■■□□□ 1.3
LMO1-203ENST00000524379 RTFDC1Q9BY42 306 aaPredicted RBP23.17■■□□□ 1.3
LMO1-203ENST00000524379 COL4A5P29400 1685 aa23.16■■□□□ 1.3
LMO1-203ENST00000524379 XDHP47989 1333 aa23.16■■□□□ 1.3
LMO1-203ENST00000524379 IRS2Q9Y4H2 1338 aa23.16■■□□□ 1.3
LMO1-203ENST00000524379 HMMRO75330 724 aa23.16■■□□□ 1.3
LMO1-203ENST00000524379 IGHDP01880 384 aa23.16■■□□□ 1.3
LMO1-203ENST00000524379 KLRK1P26718 216 aa23.16■■□□□ 1.3
LMO1-203ENST00000524379 IL15P40933 162 aaPredicted RBP23.16■■□□□ 1.3
LMO1-203ENST00000524379 HDAC1Q13547 482 aaPredicted RBP23.16■■□□□ 1.3
LMO1-203ENST00000524379 RTKN2Q8IZC4 609 aa23.16■■□□□ 1.3
LMO1-203ENST00000524379 TBC1D16Q8TBP0 767 aa23.16■■□□□ 1.3
LMO1-203ENST00000524379 MROH5Q6ZUA9 1318 aa23.15■■□□□ 1.3
LMO1-203ENST00000524379 FKBP4Q02790 459 aaKnown RBP eCLIP23.15■■□□□ 1.3
LMO1-203ENST00000524379 METTL24Q5JXM2 366 aa23.15■■□□□ 1.3
LMO1-203ENST00000524379 C9orf131Q5VYM1 1079 aa23.15■■□□□ 1.3
LMO1-203ENST00000524379 DPP8Q6V1X1 898 aaPredicted RBP23.15■■□□□ 1.3
LMO1-203ENST00000524379 LTBP3Q9NS15 1303 aa23.14■■□□□ 1.3
LMO1-203ENST00000524379 HSPA6P17066 643 aa23.14■■□□□ 1.29
LMO1-203ENST00000524379 TFCP2Q12800 502 aa23.14■■□□□ 1.29
LMO1-203ENST00000524379 PSMD1Q99460 953 aa23.14■■□□□ 1.29
LMO1-203ENST00000524379 ANKRD2Q9GZV1 360 aa23.14■■□□□ 1.29
LMO1-203ENST00000524379 DCTPP1Q9H773 170 aa23.14■■□□□ 1.29
LMO1-203ENST00000524379 ANKIB1Q9P2G1 1089 aa23.14■■□□□ 1.29
LMO1-203ENST00000524379 UFL1O94874 794 aa23.13■■□□□ 1.29
LMO1-203ENST00000524379 G3BP1Q13283 466 aaKnown RBP eCLIP23.13■■□□□ 1.29
LMO1-203ENST00000524379 TAOK3Q9H2K8 898 aa23.13■■□□□ 1.29
LMO1-203ENST00000524379 ZNF277Q9NRM2 450 aaPredicted RBP23.13■■□□□ 1.29
LMO1-203ENST00000524379 GGA1Q9UJY5 639 aa23.13■■□□□ 1.29
LMO1-203ENST00000524379 PDE8BO95263 885 aa23.12■■□□□ 1.29
LMO1-203ENST00000524379 NEFLP07196 543 aa23.12■■□□□ 1.29
LMO1-203ENST00000524379 FGFR2P21802 821 aa23.12■■□□□ 1.29
LMO1-203ENST00000524379 TXNRD3Q86VQ6 643 aa23.12■■□□□ 1.29
LMO1-203ENST00000524379 ZNF804BA4D1E1 1349 aa23.11■■□□□ 1.29
LMO1-203ENST00000524379 ATP2B4P23634 1241 aa23.11■■□□□ 1.29
LMO1-203ENST00000524379 GRIPAP1Q4V328 841 aa23.11■■□□□ 1.29
LMO1-203ENST00000524379 C6orf229H3BNL8 230 aa23.1■■□□□ 1.29
LMO1-203ENST00000524379 TMX4Q9H1E5 349 aaPredicted RBP23.1■■□□□ 1.29
LMO1-203ENST00000524379 CEP126Q9P2H0 1117 aa23.1■■□□□ 1.29
LMO1-203ENST00000524379 LEMD3Q9Y2U8 911 aa23.1■■□□□ 1.29
LMO1-203ENST00000524379 ZNF609O15014 1411 aa23.09■■□□□ 1.29
LMO1-203ENST00000524379 SBF1O95248 1867 aa23.09■■□□□ 1.29
LMO1-203ENST00000524379 APBB1O00213 710 aa23.09■■□□□ 1.29
LMO1-203ENST00000524379 OS9Q13438 667 aaPredicted RBP23.08■■□□□ 1.29
LMO1-203ENST00000524379 UBE4AQ14139 1066 aa23.08■■□□□ 1.29
LMO1-203ENST00000524379 RHPN1Q8TCX5 695 aa23.08■■□□□ 1.29
LMO1-203ENST00000524379 NMRK2Q9NPI5 230 aa23.08■■□□□ 1.29
LMO1-203ENST00000524379 RNF181Q9P0P0 153 aa23.08■■□□□ 1.29
LMO1-203ENST00000524379 MED23Q9ULK4 1368 aa23.07■■□□□ 1.28
LMO1-203ENST00000524379 RIMBP2O15034 1052 aa23.07■■□□□ 1.28
LMO1-203ENST00000524379 TOMM70O94826 608 aa23.07■■□□□ 1.28
LMO1-203ENST00000524379 IARSP41252 1262 aaKnown RBP23.07■■□□□ 1.28
LMO1-203ENST00000524379 KIAA2012Q0VF49 1180 aa23.07■■□□□ 1.28
LMO1-203ENST00000524379 PUM3Q15397 648 aaKnown RBP23.07■■□□□ 1.28
LMO1-203ENST00000524379 AOC3Q16853 763 aa23.07■■□□□ 1.28
LMO1-203ENST00000524379 C15orf52Q6ZUT6 534 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms