RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 BSDC1Q9NW68 430 aaPredicted RBP16.08■□□□□ 0.16
VEGFA-224ENST00000523873 WTIPA6NIX2 430 aaPredicted RBP16.07■□□□□ 0.16
VEGFA-224ENST00000523873 AOC3Q16853 763 aa16.07■□□□□ 0.16
VEGFA-224ENST00000523873 PUS3Q9BZE2 481 aaKnown RBP16.07■□□□□ 0.16
VEGFA-224ENST00000523873 ANKIB1Q9P2G1 1089 aa16.07■□□□□ 0.16
VEGFA-224ENST00000523873 POLLQ9UGP5 575 aa16.07■□□□□ 0.16
VEGFA-224ENST00000523873 MINPP1Q9UNW1 487 aa16.07■□□□□ 0.16
VEGFA-224ENST00000523873 SCN9AQ15858 1988 aa16.07■□□□□ 0.16
VEGFA-224ENST00000523873 ZBTB7BO15156 539 aaPredicted RBP16.06■□□□□ 0.16
VEGFA-224ENST00000523873 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
VEGFA-224ENST00000523873 MVPQ14764 893 aaKnown RBP16.06■□□□□ 0.16
VEGFA-224ENST00000523873 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.06■□□□□ 0.16
VEGFA-224ENST00000523873 HELBQ8NG08 1087 aaPredicted RBP16.06■□□□□ 0.16
VEGFA-224ENST00000523873 TBC1D16Q8TBP0 767 aa16.06■□□□□ 0.16
VEGFA-224ENST00000523873 ZNF526Q8TF50 670 aaPredicted RBP16.06■□□□□ 0.16
VEGFA-224ENST00000523873 RTFDC1Q9BY42 306 aaPredicted RBP16.06■□□□□ 0.16
VEGFA-224ENST00000523873 XDHP47989 1333 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 C6orf229H3BNL8 230 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 RIMBP2O15034 1052 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 PPIP5K2O43314 1243 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 UFL1O94874 794 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 GNAI2P04899 355 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 MS4A1P11836 297 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 RRP1P56182 461 aaKnown RBP16.05■□□□□ 0.16
VEGFA-224ENST00000523873 CHRNDQ07001 517 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 GRIPAP1Q4V328 841 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 LARGE2Q8N3Y3 721 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 CNNM1Q9NRU3 951 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 PSME4Q14997 1843 aa16.05■□□□□ 0.16
VEGFA-224ENST00000523873 SNAP23O00161 211 aa16.04■□□□□ 0.16
VEGFA-224ENST00000523873 TAF5LO75529 589 aa16.04■□□□□ 0.16
VEGFA-224ENST00000523873 LRRC24Q50LG9 513 aa16.04■□□□□ 0.16
VEGFA-224ENST00000523873 LDHAL6AQ6ZMR3 332 aa16.04■□□□□ 0.16
VEGFA-224ENST00000523873 SUPT20HQ8NEM7 779 aa16.04■□□□□ 0.16
VEGFA-224ENST00000523873 PODXL2Q9NZ53 605 aa16.04■□□□□ 0.16
VEGFA-224ENST00000523873 GGA1Q9UJY5 639 aa16.04■□□□□ 0.16
VEGFA-224ENST00000523873 ZNF541Q9H0D2 1346 aa16.03■□□□□ 0.16
VEGFA-224ENST00000523873 PA2G4Q9UQ80 394 aaKnown RBP16.03■□□□□ 0.16
VEGFA-224ENST00000523873 HDAC5Q9UQL6 1122 aa16.03■□□□□ 0.16
VEGFA-224ENST00000523873 ZNF646O15015 1829 aaPredicted RBP16.03■□□□□ 0.16
VEGFA-224ENST00000523873 PNMA6EA0A0J9YXQ4 647 aa16.02■□□□□ 0.16
VEGFA-224ENST00000523873 SRGAP3O43295 1099 aa16.02■□□□□ 0.16
VEGFA-224ENST00000523873 ATP2B4P23634 1241 aa16.02■□□□□ 0.16
VEGFA-224ENST00000523873 KLRK1P26718 216 aa16.02■□□□□ 0.16
VEGFA-224ENST00000523873 PTPN12Q05209 780 aaKnown RBP16.02■□□□□ 0.16
VEGFA-224ENST00000523873 PDE3AQ14432 1141 aa16.02■□□□□ 0.16
VEGFA-224ENST00000523873 WASHC4Q2M389 1173 aa16.02■□□□□ 0.16
VEGFA-224ENST00000523873 SIL1Q9H173 461 aa16.02■□□□□ 0.16
VEGFA-224ENST00000523873 MYH13Q9UKX3 1938 aa16.02■□□□□ 0.15
VEGFA-224ENST00000523873 KIAA2012Q0VF49 1180 aa16.01■□□□□ 0.15
VEGFA-224ENST00000523873 DOK7Q18PE1 504 aa16.01■□□□□ 0.15
VEGFA-224ENST00000523873 NIM1KQ8IY84 436 aa16.01■□□□□ 0.15
VEGFA-224ENST00000523873 ZNF784Q8NCA9 323 aaPredicted RBP16.01■□□□□ 0.15
VEGFA-224ENST00000523873 ANKRD2Q9GZV1 360 aa16.01■□□□□ 0.15
VEGFA-224ENST00000523873 DBNDD1Q9H9R9 158 aa16.01■□□□□ 0.15
VEGFA-224ENST00000523873 DDX19BQ9UMR2 479 aa16.01■□□□□ 0.15
VEGFA-224ENST00000523873 RIPOR2Q9Y4F9 1068 aa16.01■□□□□ 0.15
VEGFA-224ENST00000523873 ZNF804BA4D1E1 1349 aa16■□□□□ 0.15
VEGFA-224ENST00000523873 MTX1Q13505 466 aa16■□□□□ 0.15
VEGFA-224ENST00000523873 TXNRD3Q86VQ6 643 aa16■□□□□ 0.15
VEGFA-224ENST00000523873 JDP2Q8WYK2 163 aa16■□□□□ 0.15
VEGFA-224ENST00000523873 EYA3Q99504 573 aa16■□□□□ 0.15
VEGFA-224ENST00000523873 WDR90Q96KV7 1748 aa15.99■□□□□ 0.15
VEGFA-224ENST00000523873 YDJCA8MPS7 323 aa15.99■□□□□ 0.15
VEGFA-224ENST00000523873 FZD9O00144 591 aa15.99■□□□□ 0.15
VEGFA-224ENST00000523873 EYA2O00167 538 aa15.99■□□□□ 0.15
VEGFA-224ENST00000523873 KCNJ4P48050 445 aa15.99■□□□□ 0.15
VEGFA-224ENST00000523873 LEMD3Q9Y2U8 911 aa15.99■□□□□ 0.15
VEGFA-224ENST00000523873 DDNO94850 711 aaPredicted RBP15.98■□□□□ 0.15
VEGFA-224ENST00000523873 ATP8B2P98198 1209 aa15.98■□□□□ 0.15
VEGFA-224ENST00000523873 METTL24Q5JXM2 366 aa15.98■□□□□ 0.15
VEGFA-224ENST00000523873 ATG9AQ7Z3C6 839 aa15.98■□□□□ 0.15
VEGFA-224ENST00000523873 ARAP2Q8WZ64 1704 aa15.98■□□□□ 0.15
VEGFA-224ENST00000523873 ZC3H12CQ9C0D7 883 aaKnown RBP15.98■□□□□ 0.15
VEGFA-224ENST00000523873 VPS33BQ9H267 617 aa15.98■□□□□ 0.15
VEGFA-224ENST00000523873 KCNQ5Q9NR82 932 aa15.98■□□□□ 0.15
VEGFA-224ENST00000523873 SUPT16HQ9Y5B9 1047 aaKnown RBP15.98■□□□□ 0.15
VEGFA-224ENST00000523873 MROH5Q6ZUA9 1318 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 ZC3H4Q9UPT8 1303 aaKnown RBP15.97■□□□□ 0.15
VEGFA-224ENST00000523873 IRS2Q9Y4H2 1338 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 SCN4AP35499 1836 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 GLTPD2A6NH11 291 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 ECE2O60344 883 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 CEP85Q6P2H3 762 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 CRBNQ96SW2 442 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 NMRK2Q9NPI5 230 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 COPRSQ9NQ92 184 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 ZBTB40Q9NUA8 1239 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 ZNRF3Q9ULT6 936 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 MED23Q9ULK4 1368 aa15.97■□□□□ 0.15
VEGFA-224ENST00000523873 RAD17O75943 681 aa15.96■□□□□ 0.15
VEGFA-224ENST00000523873 EIF6P56537 245 aaKnown RBP15.96■□□□□ 0.15
VEGFA-224ENST00000523873 POLA2Q14181 598 aa15.96■□□□□ 0.15
VEGFA-224ENST00000523873 VGLL2Q8N8G2 317 aa15.96■□□□□ 0.15
VEGFA-224ENST00000523873 GPBP1L1Q9HC44 474 aaPredicted RBP15.96■□□□□ 0.15
VEGFA-224ENST00000523873 GJA3Q9Y6H8 435 aa15.96■□□□□ 0.15
VEGFA-224ENST00000523873 G3V3G9 751 aa15.95■□□□□ 0.14
VEGFA-224ENST00000523873 CIAO1O76071 339 aa15.95■□□□□ 0.14
VEGFA-224ENST00000523873 CXCL9Q07325 125 aa15.95■□□□□ 0.14
VEGFA-224ENST00000523873 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms