RNA–Protein interactions for RNA: ENST00000520229.1

PDGFRB-206, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-206ENST00000520229 ZNRF3Q9ULT6 936 aa19.54■□□□□ 0.72
PDGFRB-206ENST00000520229 UFL1O94874 794 aa19.53■□□□□ 0.72
PDGFRB-206ENST00000520229 IFFO2Q5TF58 517 aa19.53■□□□□ 0.72
PDGFRB-206ENST00000520229 TBC1D16Q8TBP0 767 aa19.53■□□□□ 0.72
PDGFRB-206ENST00000520229 PODXL2Q9NZ53 605 aa19.53■□□□□ 0.72
PDGFRB-206ENST00000520229 POLLQ9UGP5 575 aa19.53■□□□□ 0.72
PDGFRB-206ENST00000520229 GGA1Q9UJY5 639 aa19.53■□□□□ 0.72
PDGFRB-206ENST00000520229 CHMP3Q9Y3E7 222 aa19.53■□□□□ 0.72
PDGFRB-206ENST00000520229 RARSP54136 660 aaKnown RBP19.52■□□□□ 0.72
PDGFRB-206ENST00000520229 FOXO4P98177 505 aa19.52■□□□□ 0.72
PDGFRB-206ENST00000520229 BSDC1Q9NW68 430 aaPredicted RBP19.52■□□□□ 0.72
PDGFRB-206ENST00000520229 XDHP47989 1333 aa19.51■□□□□ 0.71
PDGFRB-206ENST00000520229 ANKRD18BA2A2Z9 1011 aa19.51■□□□□ 0.71
PDGFRB-206ENST00000520229 RIMBP2O15034 1052 aa19.51■□□□□ 0.71
PDGFRB-206ENST00000520229 CHADLQ6NUI6 762 aa19.51■□□□□ 0.71
PDGFRB-206ENST00000520229 HACL1Q9UJ83 578 aa19.51■□□□□ 0.71
PDGFRB-206ENST00000520229 NOB1Q9ULX3 412 aaKnown RBP19.51■□□□□ 0.71
PDGFRB-206ENST00000520229 SPEF2Q9C093 1822 aa19.51■□□□□ 0.71
PDGFRB-206ENST00000520229 ZBED9Q6R2W3 1325 aa19.51■□□□□ 0.71
PDGFRB-206ENST00000520229 BRPF1P55201 1214 aaPredicted RBP19.5■□□□□ 0.71
PDGFRB-206ENST00000520229 IFIT5Q13325 482 aaKnown RBP19.5■□□□□ 0.71
PDGFRB-206ENST00000520229 LMBR1LQ6UX01 489 aa19.5■□□□□ 0.71
PDGFRB-206ENST00000520229 GPR101Q96P66 508 aaPredicted RBP19.5■□□□□ 0.71
PDGFRB-206ENST00000520229 MPHOSPH8Q99549 860 aa19.5■□□□□ 0.71
PDGFRB-206ENST00000520229 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
PDGFRB-206ENST00000520229 ZC3H12CQ9C0D7 883 aaKnown RBP19.5■□□□□ 0.71
PDGFRB-206ENST00000520229 MINPP1Q9UNW1 487 aa19.5■□□□□ 0.71
PDGFRB-206ENST00000520229 KIF16BQ96L93 1317 aa19.5■□□□□ 0.71
PDGFRB-206ENST00000520229 ATP2B4P23634 1241 aa19.49■□□□□ 0.71
PDGFRB-206ENST00000520229 LMOD1P29536 600 aaPredicted RBP19.49■□□□□ 0.71
PDGFRB-206ENST00000520229 CXCL9Q07325 125 aa19.49■□□□□ 0.71
PDGFRB-206ENST00000520229 EPHA10Q5JZY3 1008 aa19.49■□□□□ 0.71
PDGFRB-206ENST00000520229 CIAPIN1Q6FI81 312 aa19.49■□□□□ 0.71
PDGFRB-206ENST00000520229 SUCLG2Q96I99 432 aa19.49■□□□□ 0.71
PDGFRB-206ENST00000520229 DBNDD1Q9H9R9 158 aa19.49■□□□□ 0.71
PDGFRB-206ENST00000520229 UTYO14607 1347 aa19.49■□□□□ 0.71
PDGFRB-206ENST00000520229 G3V3G9 751 aa19.48■□□□□ 0.71
PDGFRB-206ENST00000520229 RAD17O75943 681 aa19.48■□□□□ 0.71
PDGFRB-206ENST00000520229 ITGBL1O95965 494 aaPredicted RBP19.48■□□□□ 0.71
PDGFRB-206ENST00000520229 NBPF7P0C2Y1 421 aaPredicted RBP19.48■□□□□ 0.71
PDGFRB-206ENST00000520229 EPHX2P34913 555 aa19.48■□□□□ 0.71
PDGFRB-206ENST00000520229 TNIP1Q15025 636 aa19.48■□□□□ 0.71
PDGFRB-206ENST00000520229 CCDC57Q2TAC2 916 aa19.48■□□□□ 0.71
PDGFRB-206ENST00000520229 TAF7LQ5H9L4 462 aa19.48■□□□□ 0.71
PDGFRB-206ENST00000520229 DCAF8Q5TAQ9 597 aa19.48■□□□□ 0.71
PDGFRB-206ENST00000520229 LDHDQ86WU2 507 aa19.48■□□□□ 0.71
PDGFRB-206ENST00000520229 ECE2O60344 883 aa19.47■□□□□ 0.71
PDGFRB-206ENST00000520229 CCT4P50991 539 aaKnown RBP19.47■□□□□ 0.71
PDGFRB-206ENST00000520229 DOK7Q18PE1 504 aa19.47■□□□□ 0.71
PDGFRB-206ENST00000520229 EAPPQ56P03 285 aaPredicted RBP19.47■□□□□ 0.71
PDGFRB-206ENST00000520229 YDJCA8MPS7 323 aa19.46■□□□□ 0.71
PDGFRB-206ENST00000520229 SCNN1DP51172 638 aa19.46■□□□□ 0.71
PDGFRB-206ENST00000520229 ANKRD2Q9GZV1 360 aa19.46■□□□□ 0.71
PDGFRB-206ENST00000520229 PNMA8AQ86V59 439 aaPredicted RBP19.45■□□□□ 0.7
PDGFRB-206ENST00000520229 BICC1Q9H694 974 aaKnown RBP19.45■□□□□ 0.7
PDGFRB-206ENST00000520229 CREBZFQ9NS37 354 aa19.45■□□□□ 0.7
PDGFRB-206ENST00000520229 THSD7BQ9C0I4 1608 aa19.44■□□□□ 0.7
PDGFRB-206ENST00000520229 GMPSP49915 693 aaPredicted RBP19.44■□□□□ 0.7
PDGFRB-206ENST00000520229 ARHGAP45Q92619 1136 aa19.44■□□□□ 0.7
PDGFRB-206ENST00000520229 KAZALD1Q96I82 304 aa19.44■□□□□ 0.7
PDGFRB-206ENST00000520229 USP44Q9H0E7 712 aa19.44■□□□□ 0.7
PDGFRB-206ENST00000520229 CLEC11AQ9Y240 323 aa19.44■□□□□ 0.7
PDGFRB-206ENST00000520229 LEMD3Q9Y2U8 911 aa19.44■□□□□ 0.7
PDGFRB-206ENST00000520229 IPO8O15397 1037 aaKnown RBP19.43■□□□□ 0.7
PDGFRB-206ENST00000520229 EPS15P42566 896 aa19.43■□□□□ 0.7
PDGFRB-206ENST00000520229 KCNJ4P48050 445 aa19.43■□□□□ 0.7
PDGFRB-206ENST00000520229 CHRNDQ07001 517 aa19.43■□□□□ 0.7
PDGFRB-206ENST00000520229 CNTNAP1P78357 1384 aa19.43■□□□□ 0.7
PDGFRB-206ENST00000520229 MED23Q9ULK4 1368 aa19.43■□□□□ 0.7
PDGFRB-206ENST00000520229 PSMD14O00487 310 aa19.42■□□□□ 0.7
PDGFRB-206ENST00000520229 BCAR3O75815 825 aa19.42■□□□□ 0.7
PDGFRB-206ENST00000520229 LDHAL6AQ6ZMR3 332 aa19.42■□□□□ 0.7
PDGFRB-206ENST00000520229 FRAT1Q92837 279 aaPredicted RBP19.42■□□□□ 0.7
PDGFRB-206ENST00000520229 ZNF594Q96JF6 807 aaPredicted RBP19.42■□□□□ 0.7
PDGFRB-206ENST00000520229 GPRC5DQ9NZD1 345 aa19.42■□□□□ 0.7
PDGFRB-206ENST00000520229 WTIPA6NIX2 430 aaPredicted RBP19.41■□□□□ 0.7
PDGFRB-206ENST00000520229 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
PDGFRB-206ENST00000520229 ANKRD44Q8N8A2 993 aa19.41■□□□□ 0.7
PDGFRB-206ENST00000520229 CNNM1Q9NRU3 951 aa19.41■□□□□ 0.7
PDGFRB-206ENST00000520229 ZNF804BA4D1E1 1349 aa19.41■□□□□ 0.7
PDGFRB-206ENST00000520229 TRPM7Q96QT4 1865 aa19.4■□□□□ 0.7
PDGFRB-206ENST00000520229 UBTFL1P0CB47 393 aaPredicted RBP19.4■□□□□ 0.7
PDGFRB-206ENST00000520229 HELBQ8NG08 1087 aaPredicted RBP19.4■□□□□ 0.7
PDGFRB-206ENST00000520229 KCNQ5Q9NR82 932 aa19.4■□□□□ 0.7
PDGFRB-206ENST00000520229 ADARB2Q9NS39 739 aaKnown RBP19.4■□□□□ 0.7
PDGFRB-206ENST00000520229 ZBTB12Q9Y330 459 aaPredicted RBP19.4■□□□□ 0.7
PDGFRB-206ENST00000520229 SCN9AQ15858 1988 aa19.4■□□□□ 0.7
PDGFRB-206ENST00000520229 COL13A1Q5TAT6 717 aaPredicted RBP19.39■□□□□ 0.69
PDGFRB-206ENST00000520229 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.69
PDGFRB-206ENST00000520229 USP50Q70EL3 339 aaPredicted RBP19.39■□□□□ 0.69
PDGFRB-206ENST00000520229 ZNF646O15015 1829 aaPredicted RBP19.38■□□□□ 0.69
PDGFRB-206ENST00000520229 PLIN1O60240 522 aa19.38■□□□□ 0.69
PDGFRB-206ENST00000520229 TAF5LO75529 589 aa19.38■□□□□ 0.69
PDGFRB-206ENST00000520229 TRIM27P14373 513 aa19.38■□□□□ 0.69
PDGFRB-206ENST00000520229 RPS12P25398 132 aaKnown RBP19.38■□□□□ 0.69
PDGFRB-206ENST00000520229 PODNQ7Z5L7 613 aa19.38■□□□□ 0.69
PDGFRB-206ENST00000520229 COA1Q9GZY4 146 aa19.38■□□□□ 0.69
PDGFRB-206ENST00000520229 HDAC5Q9UQL6 1122 aa19.38■□□□□ 0.69
PDGFRB-206ENST00000520229 H7C1D1 291 aa19.37■□□□□ 0.69
PDGFRB-206ENST00000520229 VIL1P09327 827 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms