RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 R3HCC1Q9Y3T6 440 aaKnown RBP9.26□□□□□ -0.93
NPHP3-211ENST00000515289 RAPGEF2Q9Y4G8 1499 aa9.26□□□□□ -0.93
NPHP3-211ENST00000515289 PPEF1O14829 653 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-211ENST00000515289 NR3C2P08235 984 aa9.25□□□□□ -0.93
NPHP3-211ENST00000515289 GBP2P32456 591 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-211ENST00000515289 CCDC85BQ15834 202 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-211ENST00000515289 C3orf58Q8NDZ4 430 aa9.25□□□□□ -0.93
NPHP3-211ENST00000515289 C7orf43Q8WVR3 580 aa9.25□□□□□ -0.93
NPHP3-211ENST00000515289 NLRP3Q96P20 1036 aa9.25□□□□□ -0.93
NPHP3-211ENST00000515289 ZSCAN10Q96SZ4 725 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-211ENST00000515289 PSMD1Q99460 953 aa9.25□□□□□ -0.93
NPHP3-211ENST00000515289 CCDC113Q9H0I3 377 aa9.25□□□□□ -0.93
NPHP3-211ENST00000515289 ELP3Q9H9T3 547 aa9.25□□□□□ -0.93
NPHP3-211ENST00000515289 TYW1Q9NV66 732 aaKnown RBP9.25□□□□□ -0.93
NPHP3-211ENST00000515289 FAN1Q9Y2M0 1017 aa9.25□□□□□ -0.93
NPHP3-211ENST00000515289 MSRB2Q9Y3D2 182 aa9.25□□□□□ -0.93
NPHP3-211ENST00000515289 GPC6Q9Y625 555 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-211ENST00000515289 URB2Q14146 1524 aaKnown RBP9.25□□□□□ -0.93
NPHP3-211ENST00000515289 MINDY4BA8MYZ0 360 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 SIAH2O43255 324 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 RPIAP49247 311 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 IDH3AP50213 366 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 ARSDP51689 593 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 AMPD3Q01432 767 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 MAP3K10Q02779 954 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 CBLBQ13191 982 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 TRIP4Q15650 581 aaPredicted RBP9.24□□□□□ -0.93
NPHP3-211ENST00000515289 KIAA0907Q7Z7F0 614 aaPredicted RBP9.24□□□□□ -0.93
NPHP3-211ENST00000515289 TRPM4Q8TD43 1214 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 CPLX3Q8WVH0 158 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 STAG1Q8WVM7 1258 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 OTUD5Q96G74 571 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 MYH16Q9H6N6 1097 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 PPP4R2Q9NY27 417 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 TMEM63CQ9P1W3 806 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 PPM1HQ9ULR3 514 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 ERICH3Q5RHP9 1530 aa9.24□□□□□ -0.93
NPHP3-211ENST00000515289 PDS5BQ9NTI5 1447 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 CUX2O14529 1486 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 POLA1P09884 1462 aaPredicted RBP9.23□□□□□ -0.93
NPHP3-211ENST00000515289 UBAP1LF5GYI3 381 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 TPD52L2O43399 206 aaKnown RBP9.23□□□□□ -0.93
NPHP3-211ENST00000515289 S100BP04271 92 aaPredicted RBP9.23□□□□□ -0.93
NPHP3-211ENST00000515289 POLR3DP05423 398 aaPredicted RBP9.23□□□□□ -0.93
NPHP3-211ENST00000515289 GTF2E1P29083 439 aaPredicted RBP9.23□□□□□ -0.93
NPHP3-211ENST00000515289 TNNI3KQ59H18 835 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 PLA2G2CQ5R387 149 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 PCNX4Q63HM2 1172 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 TMEM214Q6NUQ4 689 aaKnown RBP9.23□□□□□ -0.93
NPHP3-211ENST00000515289 HOMER1Q86YM7 354 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 SUSD3Q96L08 255 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 RHOVQ96L33 236 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 CHRDQ9H2X0 955 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 TRAK1Q9UPV9 953 aa9.23□□□□□ -0.93
NPHP3-211ENST00000515289 INPP5BP32019 993 aa9.22□□□□□ -0.93
NPHP3-211ENST00000515289 PTGIRP43119 386 aa9.22□□□□□ -0.93
NPHP3-211ENST00000515289 TAF7LQ5H9L4 462 aa9.22□□□□□ -0.93
NPHP3-211ENST00000515289 KIAA0319Q5VV43 1072 aa9.22□□□□□ -0.93
NPHP3-211ENST00000515289 GLIS3Q8NEA6 775 aa9.22□□□□□ -0.93
NPHP3-211ENST00000515289 ANAPC16Q96DE5 110 aa9.22□□□□□ -0.93
NPHP3-211ENST00000515289 TRIM56Q9BRZ2 755 aaKnown RBP9.22□□□□□ -0.93
NPHP3-211ENST00000515289 ZDHHC3Q9NYG2 299 aa9.22□□□□□ -0.93
NPHP3-211ENST00000515289 MAGEC2Q9UBF1 373 aaPredicted RBP9.22□□□□□ -0.93
NPHP3-211ENST00000515289 RTCBQ9Y3I0 505 aaKnown RBP9.22□□□□□ -0.93
NPHP3-211ENST00000515289 SUPT16HQ9Y5B9 1047 aaKnown RBP9.22□□□□□ -0.93
NPHP3-211ENST00000515289 KCNMB2Q9Y691 235 aa9.22□□□□□ -0.93
NPHP3-211ENST00000515289 ABCA10Q8WWZ4 1543 aa9.21□□□□□ -0.93
NPHP3-211ENST00000515289 CCDC194A0A1B0GVG4 234 aa9.21□□□□□ -0.94
NPHP3-211ENST00000515289 MEN1O00255 615 aa9.21□□□□□ -0.94
NPHP3-211ENST00000515289 GREM1O60565 184 aa9.21□□□□□ -0.94
NPHP3-211ENST00000515289 FBXL19Q6PCT2 694 aa9.21□□□□□ -0.94
NPHP3-211ENST00000515289 PMEPA1Q969W9 287 aa9.21□□□□□ -0.94
NPHP3-211ENST00000515289 KANSL2Q9H9L4 492 aa9.21□□□□□ -0.94
NPHP3-211ENST00000515289 RNF223E7ERA6 249 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 F6X3S4 739 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 EREGO14944 169 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 GARTP22102 1010 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 VEGFBP49765 207 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 GYS2P54840 703 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 NBPF1Q3BBV0 1214 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 SV2BQ7L1I2 683 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 LILRB2Q8N423 598 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 KCTD12Q96CX2 325 aaKnown RBP9.2□□□□□ -0.94
NPHP3-211ENST00000515289 SHDQ96IW2 340 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 DNAJC7Q99615 494 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 SRRTQ9BXP5 876 aaKnown RBP9.2□□□□□ -0.94
NPHP3-211ENST00000515289 TMEM260Q9NX78 707 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 ANKIB1Q9P2G1 1089 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 IGF1RP08069 1367 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 RAD54L2Q9Y4B4 1467 aa9.2□□□□□ -0.94
NPHP3-211ENST00000515289 ESYT3A0FGR9 886 aa9.19□□□□□ -0.94
NPHP3-211ENST00000515289 CCDC85CA6NKD9 419 aa9.19□□□□□ -0.94
NPHP3-211ENST00000515289 PDGFRBP09619 1106 aa9.19□□□□□ -0.94
NPHP3-211ENST00000515289 PLA2G4AP47712 749 aa9.19□□□□□ -0.94
NPHP3-211ENST00000515289 CTC1Q2NKJ3 1217 aa9.19□□□□□ -0.94
NPHP3-211ENST00000515289 GNASQ5JWF2 1037 aa9.19□□□□□ -0.94
NPHP3-211ENST00000515289 GORABQ5T7V8 394 aa9.19□□□□□ -0.94
NPHP3-211ENST00000515289 PRPF40BQ6NWY9 871 aaKnown RBP9.19□□□□□ -0.94
NPHP3-211ENST00000515289 Q6ZVU0 165 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms