RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 KIF4AO95239 1232 aa8.81□□□□□ -1
HMGCS1-207ENST00000514610 ACPPP15309 386 aa8.81□□□□□ -1
HMGCS1-207ENST00000514610 NRLP54845 237 aa8.81□□□□□ -1
HMGCS1-207ENST00000514610 ATP2B2Q01814 1243 aa8.81□□□□□ -1
HMGCS1-207ENST00000514610 PLAURQ03405 335 aa8.81□□□□□ -1
HMGCS1-207ENST00000514610 TBC1D8BQ0IIM8 1120 aa8.81□□□□□ -1
HMGCS1-207ENST00000514610 ALG1LQ6GMV1 187 aa8.81□□□□□ -1
HMGCS1-207ENST00000514610 TRPM4Q8TD43 1214 aa8.81□□□□□ -1
HMGCS1-207ENST00000514610 IGFLR1Q9H665 355 aa8.81□□□□□ -1
HMGCS1-207ENST00000514610 NPHS2Q9NP85 383 aa8.81□□□□□ -1
HMGCS1-207ENST00000514610 ADH6P28332 368 aa8.8□□□□□ -1
HMGCS1-207ENST00000514610 GMPRP36959 345 aa8.8□□□□□ -1
HMGCS1-207ENST00000514610 GPLD1P80108 840 aa8.8□□□□□ -1
HMGCS1-207ENST00000514610 SRSF11Q05519 484 aaKnown RBP8.8□□□□□ -1
HMGCS1-207ENST00000514610 ZNF326Q5BKZ1 582 aaKnown RBP8.8□□□□□ -1
HMGCS1-207ENST00000514610 PEAR1Q5VY43 1037 aaPredicted RBP8.8□□□□□ -1
HMGCS1-207ENST00000514610 FBF1Q8TES7 1133 aa8.8□□□□□ -1
HMGCS1-207ENST00000514610 TNFRSF25Q93038 417 aa8.8□□□□□ -1
HMGCS1-207ENST00000514610 PMEPA1Q969W9 287 aa8.8□□□□□ -1
HMGCS1-207ENST00000514610 FAM161BQ96MY7 647 aa8.8□□□□□ -1
HMGCS1-207ENST00000514610 UBE2OQ9C0C9 1292 aaKnown RBP8.8□□□□□ -1
HMGCS1-207ENST00000514610 PARP2Q9UGN5 583 aa8.8□□□□□ -1
HMGCS1-207ENST00000514610 GGA1Q9UJY5 639 aa8.8□□□□□ -1
HMGCS1-207ENST00000514610 NSFL1CQ9UNZ2 370 aaKnown RBP8.8□□□□□ -1
HMGCS1-207ENST00000514610 J3QW42 95 aa8.79□□□□□ -1
HMGCS1-207ENST00000514610 ADAMTS2O95450 1211 aa8.79□□□□□ -1
HMGCS1-207ENST00000514610 HYAL2Q12891 473 aa8.79□□□□□ -1
HMGCS1-207ENST00000514610 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.79□□□□□ -1
HMGCS1-207ENST00000514610 HFE2Q6ZVN8 426 aa8.79□□□□□ -1
HMGCS1-207ENST00000514610 ACDQ96AP0 544 aa8.79□□□□□ -1
HMGCS1-207ENST00000514610 KIAA1522Q9P206 1035 aaPredicted RBP8.79□□□□□ -1
HMGCS1-207ENST00000514610 NAGPAQ9UK23 515 aa8.79□□□□□ -1
HMGCS1-207ENST00000514610 ADARB2-AS1A8MUL3 147 aa8.78□□□□□ -1
HMGCS1-207ENST00000514610 C1orf229Q6ZS94 237 aaPredicted RBP8.78□□□□□ -1
HMGCS1-207ENST00000514610 CEP120Q8N960 986 aa8.78□□□□□ -1
HMGCS1-207ENST00000514610 OXCT2Q9BYC2 517 aaPredicted RBP8.78□□□□□ -1
HMGCS1-207ENST00000514610 SLC6A14Q9UN76 642 aa8.78□□□□□ -1
HMGCS1-207ENST00000514610 LOC102724428A0A0B4J2F2 783 aa8.77□□□□□ -1.01
HMGCS1-207ENST00000514610 A0A1W2PP55 124 aa8.77□□□□□ -1.01
HMGCS1-207ENST00000514610 TRPA1O75762 1119 aa8.77□□□□□ -1.01
HMGCS1-207ENST00000514610 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
HMGCS1-207ENST00000514610 ADH7P40394 386 aa8.77□□□□□ -1.01
HMGCS1-207ENST00000514610 SIK1P57059 783 aa8.77□□□□□ -1.01
HMGCS1-207ENST00000514610 SLCO4C1Q6ZQN7 724 aa8.77□□□□□ -1.01
HMGCS1-207ENST00000514610 NPM2Q86SE8 214 aaKnown RBP8.77□□□□□ -1.01
HMGCS1-207ENST00000514610 NCAPG2Q86XI2 1143 aa8.77□□□□□ -1.01
HMGCS1-207ENST00000514610 EDN3P14138 238 aa8.76□□□□□ -1.01
HMGCS1-207ENST00000514610 GNA15P30679 374 aa8.76□□□□□ -1.01
HMGCS1-207ENST00000514610 DAB2P98082 770 aa8.76□□□□□ -1.01
HMGCS1-207ENST00000514610 MRRFQ96E11 262 aaKnown RBP8.76□□□□□ -1.01
HMGCS1-207ENST00000514610 HHIPQ96QV1 700 aa8.76□□□□□ -1.01
HMGCS1-207ENST00000514610 OSBPL7Q9BZF2 842 aa8.76□□□□□ -1.01
HMGCS1-207ENST00000514610 SLURP2P0DP57 97 aa8.75□□□□□ -1.01
HMGCS1-207ENST00000514610 FGD1P98174 961 aa8.75□□□□□ -1.01
HMGCS1-207ENST00000514610 ATP11AP98196 1134 aa8.75□□□□□ -1.01
HMGCS1-207ENST00000514610 MRPL58Q14197 206 aaKnown RBP8.75□□□□□ -1.01
HMGCS1-207ENST00000514610 KIAA0319Q5VV43 1072 aa8.75□□□□□ -1.01
HMGCS1-207ENST00000514610 TMC4Q7Z404 712 aa8.75□□□□□ -1.01
HMGCS1-207ENST00000514610 GOLGA6L1Q8N7Z2 621 aa8.75□□□□□ -1.01
HMGCS1-207ENST00000514610 ZKSCAN3Q9BRR0 538 aa8.75□□□□□ -1.01
HMGCS1-207ENST00000514610 DZANK1Q9NVP4 752 aa8.75□□□□□ -1.01
HMGCS1-207ENST00000514610 GDF2Q9UK05 429 aaPredicted RBP8.75□□□□□ -1.01
HMGCS1-207ENST00000514610 ELOA3CA0A087WX78 387 aaPredicted RBP8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 ELOA3DA6NLF2 546 aaPredicted RBP8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 NFKBIEO00221 500 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 EPXP11678 715 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 CPB1P15086 417 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 XPCQ01831 940 aaPredicted RBP8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 PSMD2Q13200 908 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 GRM2Q14416 872 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 ELOA3BQ3SY89 546 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 PERM1Q5SV97 790 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 FAM35AQ86V20 835 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 ELOA3Q8NG57 546 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 OSMRQ99650 979 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 RASSF4Q9H2L5 321 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 SUV39H2Q9H5I1 410 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 NLRP2Q9NX02 1062 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 STARD13Q9Y3M8 1113 aa8.74□□□□□ -1.01
HMGCS1-207ENST00000514610 GADD45BO75293 160 aaPredicted RBP8.73□□□□□ -1.01
HMGCS1-207ENST00000514610 EIF2AK2P19525 551 aaKnown RBP8.73□□□□□ -1.01
HMGCS1-207ENST00000514610 ADAMTSL4Q6UY14 1074 aa8.73□□□□□ -1.01
HMGCS1-207ENST00000514610 GLIS3Q8NEA6 775 aa8.73□□□□□ -1.01
HMGCS1-207ENST00000514610 WHAMMQ8TF30 809 aa8.73□□□□□ -1.01
HMGCS1-207ENST00000514610 TCF12Q99081 682 aa8.73□□□□□ -1.01
HMGCS1-207ENST00000514610 LPIN3Q9BQK8 851 aa8.73□□□□□ -1.01
HMGCS1-207ENST00000514610 BCO2Q9BYV7 579 aa8.73□□□□□ -1.01
HMGCS1-207ENST00000514610 PCSK7Q16549 785 aa8.72□□□□□ -1.01
HMGCS1-207ENST00000514610 NXPE4Q6UWF7 544 aa8.72□□□□□ -1.01
HMGCS1-207ENST00000514610 SPG7Q9UQ90 795 aa8.72□□□□□ -1.01
HMGCS1-207ENST00000514610 AK5Q9Y6K8 562 aa8.72□□□□□ -1.01
HMGCS1-207ENST00000514610 SHISA8B8ZZ34 492 aa8.71□□□□□ -1.02
HMGCS1-207ENST00000514610 GHRHP01286 108 aa8.71□□□□□ -1.02
HMGCS1-207ENST00000514610 LDLRAD1Q5T700 205 aa8.71□□□□□ -1.02
HMGCS1-207ENST00000514610 LYPD4Q6UWN0 246 aa8.71□□□□□ -1.02
HMGCS1-207ENST00000514610 ZSCAN1Q8NBB4 408 aa8.71□□□□□ -1.02
HMGCS1-207ENST00000514610 PLD4Q96BZ4 506 aa8.71□□□□□ -1.02
HMGCS1-207ENST00000514610 SPACA7Q96KW9 195 aa8.71□□□□□ -1.02
HMGCS1-207ENST00000514610 PBX4Q9BYU1 374 aa8.71□□□□□ -1.02
HMGCS1-207ENST00000514610 EHD4Q9H223 541 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms