RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 ANGEL2Q5VTE6 544 aaKnown RBP13.85□□□□□ -0.19
CLDND1-227ENST00000513452 FBXO46Q6PJ61 603 aaPredicted RBP13.85□□□□□ -0.19
CLDND1-227ENST00000513452 CELF1Q92879 486 aaKnown RBP13.85□□□□□ -0.19
CLDND1-227ENST00000513452 POLLQ9UGP5 575 aa13.85□□□□□ -0.19
CLDND1-227ENST00000513452 FKBP1BP68106 108 aa13.84□□□□□ -0.19
CLDND1-227ENST00000513452 MOB2Q70IA6 237 aa13.84□□□□□ -0.19
CLDND1-227ENST00000513452 EYA3Q99504 573 aa13.84□□□□□ -0.19
CLDND1-227ENST00000513452 GPR25O00155 361 aa13.83□□□□□ -0.2
CLDND1-227ENST00000513452 SCARF1Q14162 830 aa13.83□□□□□ -0.2
CLDND1-227ENST00000513452 COPS6Q7L5N1 327 aa13.83□□□□□ -0.2
CLDND1-227ENST00000513452 XAGE3Q8WTP9 111 aa13.83□□□□□ -0.2
CLDND1-227ENST00000513452 NECTIN2Q92692 538 aa13.83□□□□□ -0.2
CLDND1-227ENST00000513452 TSPYL4Q9UJ04 414 aa13.83□□□□□ -0.2
CLDND1-227ENST00000513452 SCN9AQ15858 1988 aa13.82□□□□□ -0.2
CLDND1-227ENST00000513452 UBE2Q2LH0YL09 131 aa13.82□□□□□ -0.2
CLDND1-227ENST00000513452 VIL1P09327 827 aaKnown RBP13.82□□□□□ -0.2
CLDND1-227ENST00000513452 MKRN3Q13064 507 aaKnown RBP13.82□□□□□ -0.2
CLDND1-227ENST00000513452 TCIRG1Q13488 830 aa13.82□□□□□ -0.2
CLDND1-227ENST00000513452 TBC1D16Q8TBP0 767 aa13.82□□□□□ -0.2
CLDND1-227ENST00000513452 SCAF8Q9UPN6 1271 aaKnown RBP13.82□□□□□ -0.2
CLDND1-227ENST00000513452 G3V3G9 751 aa13.81□□□□□ -0.2
CLDND1-227ENST00000513452 ZNF280AP59817 542 aaPredicted RBP13.81□□□□□ -0.2
CLDND1-227ENST00000513452 NFE2L2Q16236 605 aa13.81□□□□□ -0.2
CLDND1-227ENST00000513452 DCAF8Q5TAQ9 597 aa13.81□□□□□ -0.2
CLDND1-227ENST00000513452 TTLL12Q14166 644 aaPredicted RBP13.8□□□□□ -0.2
CLDND1-227ENST00000513452 NOM1Q5C9Z4 860 aaKnown RBP13.8□□□□□ -0.2
CLDND1-227ENST00000513452 RSBN1LQ6PCB5 846 aaPredicted RBP13.8□□□□□ -0.2
CLDND1-227ENST00000513452 ZC3H12CQ9C0D7 883 aaKnown RBP13.8□□□□□ -0.2
CLDND1-227ENST00000513452 ZNF609O15014 1411 aa13.8□□□□□ -0.2
CLDND1-227ENST00000513452 FKTNO75072 461 aa13.79□□□□□ -0.2
CLDND1-227ENST00000513452 UFL1O94874 794 aa13.79□□□□□ -0.2
CLDND1-227ENST00000513452 TM4SF4P48230 202 aa13.79□□□□□ -0.2
CLDND1-227ENST00000513452 SF3B3Q15393 1217 aaKnown RBP13.79□□□□□ -0.2
CLDND1-227ENST00000513452 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
CLDND1-227ENST00000513452 AGBL3Q8NEM8 1001 aa13.79□□□□□ -0.2
CLDND1-227ENST00000513452 FAM89AQ96GI7 184 aa13.79□□□□□ -0.2
CLDND1-227ENST00000513452 MYOZ2Q9NPC6 264 aa13.79□□□□□ -0.2
CLDND1-227ENST00000513452 PITPNM2Q9BZ72 1349 aa13.79□□□□□ -0.2
CLDND1-227ENST00000513452 POTEFA5A3E0 1075 aa13.78□□□□□ -0.2
CLDND1-227ENST00000513452 SREBF2Q12772 1141 aa13.78□□□□□ -0.2
CLDND1-227ENST00000513452 RTL5Q5HYW3 569 aaPredicted RBP13.78□□□□□ -0.2
CLDND1-227ENST00000513452 PLEKHF1Q96S99 279 aa13.78□□□□□ -0.2
CLDND1-227ENST00000513452 R3HDMLQ9H3Y0 253 aa13.78□□□□□ -0.2
CLDND1-227ENST00000513452 USP17L8P0C7I0 530 aa13.77□□□□□ -0.21
CLDND1-227ENST00000513452 FXR1P51114 621 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLDND1-227ENST00000513452 CCER1Q8TC90 406 aaPredicted RBP13.77□□□□□ -0.21
CLDND1-227ENST00000513452 ANKIB1Q9P2G1 1089 aa13.77□□□□□ -0.21
CLDND1-227ENST00000513452 GGA1Q9UJY5 639 aa13.77□□□□□ -0.21
CLDND1-227ENST00000513452 MAPK8IP3Q9UPT6 1336 aa13.77□□□□□ -0.21
CLDND1-227ENST00000513452 ATP5J2-PTCD1G3V325 749 aa13.76□□□□□ -0.21
CLDND1-227ENST00000513452 RPS8P62241 208 aaKnown RBP13.76□□□□□ -0.21
CLDND1-227ENST00000513452 GMLQ99445 158 aa13.76□□□□□ -0.21
CLDND1-227ENST00000513452 CFHR5Q9BXR6 569 aa13.76□□□□□ -0.21
CLDND1-227ENST00000513452 PODXL2Q9NZ53 605 aa13.76□□□□□ -0.21
CLDND1-227ENST00000513452 TRIM17Q9Y577 477 aa13.76□□□□□ -0.21
CLDND1-227ENST00000513452 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
CLDND1-227ENST00000513452 NF2P35240 595 aa13.75□□□□□ -0.21
CLDND1-227ENST00000513452 NBPF9Q3BBW0 867 aa13.75□□□□□ -0.21
CLDND1-227ENST00000513452 CHPF2Q9P2E5 772 aa13.75□□□□□ -0.21
CLDND1-227ENST00000513452 PSME4Q14997 1843 aa13.74□□□□□ -0.21
CLDND1-227ENST00000513452 PTPN12Q05209 780 aaKnown RBP13.74□□□□□ -0.21
CLDND1-227ENST00000513452 PRKG1Q13976 671 aa13.74□□□□□ -0.21
CLDND1-227ENST00000513452 INTS3Q68E01 1043 aaKnown RBP13.74□□□□□ -0.21
CLDND1-227ENST00000513452 OTOP1Q7RTM1 612 aa13.74□□□□□ -0.21
CLDND1-227ENST00000513452 PLBD2Q8NHP8 589 aa13.74□□□□□ -0.21
CLDND1-227ENST00000513452 ISCA1Q9BUE6 129 aa13.74□□□□□ -0.21
CLDND1-227ENST00000513452 SEC31BQ9NQW1 1179 aa13.74□□□□□ -0.21
CLDND1-227ENST00000513452 HTTP42858 3142 aa13.74□□□□□ -0.21
CLDND1-227ENST00000513452 MKI67P46013 3256 aaKnown RBP13.74□□□□□ -0.21
CLDND1-227ENST00000513452 USP17L3A6NCW0 530 aa13.73□□□□□ -0.21
CLDND1-227ENST00000513452 USP17L4A6NCW7 530 aa13.73□□□□□ -0.21
CLDND1-227ENST00000513452 KRT24Q2M2I5 525 aa13.73□□□□□ -0.21
CLDND1-227ENST00000513452 USP17L1Q7RTZ2 530 aa13.73□□□□□ -0.21
CLDND1-227ENST00000513452 SPRYD7Q5W111 196 aa13.72□□□□□ -0.21
CLDND1-227ENST00000513452 ANKRD13DQ6ZTN6 518 aa13.72□□□□□ -0.21
CLDND1-227ENST00000513452 ARMC9Q7Z3E5 817 aa13.72□□□□□ -0.21
CLDND1-227ENST00000513452 RBBP6Q7Z6E9 1792 aaKnown RBP13.72□□□□□ -0.21
CLDND1-227ENST00000513452 SASH1O94885 1247 aa13.71□□□□□ -0.21
CLDND1-227ENST00000513452 ALDH1A1P00352 501 aa13.71□□□□□ -0.21
CLDND1-227ENST00000513452 EN2P19622 333 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-227ENST00000513452 RIPK4P57078 832 aa13.71□□□□□ -0.21
CLDND1-227ENST00000513452 MXD3Q9BW11 206 aa13.71□□□□□ -0.21
CLDND1-227ENST00000513452 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.21
CLDND1-227ENST00000513452 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-227ENST00000513452 XDHP47989 1333 aa13.7□□□□□ -0.22
CLDND1-227ENST00000513452 WNT10BO00744 389 aa13.7□□□□□ -0.22
CLDND1-227ENST00000513452 HDGFL1Q5TGJ6 251 aa13.7□□□□□ -0.22
CLDND1-227ENST00000513452 PODNQ7Z5L7 613 aa13.7□□□□□ -0.22
CLDND1-227ENST00000513452 OGFOD1Q8N543 542 aa13.7□□□□□ -0.22
CLDND1-227ENST00000513452 FBXW7Q969H0 707 aa13.7□□□□□ -0.22
CLDND1-227ENST00000513452 CCDC85AQ96PX6 553 aaPredicted RBP13.7□□□□□ -0.22
CLDND1-227ENST00000513452 PNNQ9H307 717 aaKnown RBP13.7□□□□□ -0.22
CLDND1-227ENST00000513452 COLQQ9Y215 455 aaPredicted RBP13.7□□□□□ -0.22
CLDND1-227ENST00000513452 IFNL1Q8IU54 200 aa13.69□□□□□ -0.22
CLDND1-227ENST00000513452 CD99L2Q8TCZ2 262 aa13.69□□□□□ -0.22
CLDND1-227ENST00000513452 ANGEL1Q9UNK9 670 aaKnown RBP13.69□□□□□ -0.22
CLDND1-227ENST00000513452 FZD1Q9UP38 647 aa13.69□□□□□ -0.22
CLDND1-227ENST00000513452 PTPN22Q9Y2R2 807 aa13.69□□□□□ -0.22
CLDND1-227ENST00000513452 MANSC4A6NHS7 340 aaPredicted RBP13.68□□□□□ -0.22
CLDND1-227ENST00000513452 WTIPA6NIX2 430 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms