RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 EYA3Q99504 573 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 BCL2L13Q9BXK5 485 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 RTFDC1Q9BY42 306 aaPredicted RBP8.26□□□□□ -1.09
KDM3B-208ENST00000512928 VPS33BQ9H267 617 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 TAF1DQ9H5J8 278 aaPredicted RBP8.26□□□□□ -1.09
KDM3B-208ENST00000512928 GREM2Q9H772 168 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 DUOX1Q9NRD9 1551 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 SPEF2Q9C093 1822 aa8.25□□□□□ -1.09
KDM3B-208ENST00000512928 IGHMBP2P38935 993 aaKnown RBP8.25□□□□□ -1.09
KDM3B-208ENST00000512928 SLFN5Q08AF3 891 aa8.25□□□□□ -1.09
KDM3B-208ENST00000512928 KIAA2012Q0VF49 1180 aa8.25□□□□□ -1.09
KDM3B-208ENST00000512928 DOK7Q18PE1 504 aa8.25□□□□□ -1.09
KDM3B-208ENST00000512928 CIAPIN1Q6FI81 312 aa8.25□□□□□ -1.09
KDM3B-208ENST00000512928 PNMA8AQ86V59 439 aaPredicted RBP8.25□□□□□ -1.09
KDM3B-208ENST00000512928 LDHDQ86WU2 507 aa8.25□□□□□ -1.09
KDM3B-208ENST00000512928 TBC1D16Q8TBP0 767 aa8.25□□□□□ -1.09
KDM3B-208ENST00000512928 DBNDD1Q9H9R9 158 aa8.25□□□□□ -1.09
KDM3B-208ENST00000512928 C9orf78Q9NZ63 289 aaPredicted RBP8.25□□□□□ -1.09
KDM3B-208ENST00000512928 POLLQ9UGP5 575 aa8.25□□□□□ -1.09
KDM3B-208ENST00000512928 GGA1Q9UJY5 639 aa8.25□□□□□ -1.09
KDM3B-208ENST00000512928 SCN4AP35499 1836 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 H7C1W4 665 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 ITGA6P23229 1130 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 EPS15P42566 896 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 GMPSP49915 693 aaPredicted RBP8.24□□□□□ -1.09
KDM3B-208ENST00000512928 CXCL9Q07325 125 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 TNIP1Q15025 636 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 FAM161AQ3B820 660 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 BEND3Q5T5X7 828 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 TTLL11Q8NHH1 800 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 MPHOSPH8Q99549 860 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 ZC3H12CQ9C0D7 883 aaKnown RBP8.24□□□□□ -1.09
KDM3B-208ENST00000512928 SRCIN1Q9C0H9 1055 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 SMC4Q9NTJ3 1288 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 CACNA1FO60840 1977 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 XDHP47989 1333 aa8.24□□□□□ -1.09
KDM3B-208ENST00000512928 ANKRD18BA2A2Z9 1011 aa8.23□□□□□ -1.09
KDM3B-208ENST00000512928 GRM8O00222 908 aa8.23□□□□□ -1.09
KDM3B-208ENST00000512928 ECE2O60344 883 aa8.23□□□□□ -1.09
KDM3B-208ENST00000512928 KCNJ4P48050 445 aa8.23□□□□□ -1.09
KDM3B-208ENST00000512928 SCNN1DP51172 638 aa8.23□□□□□ -1.09
KDM3B-208ENST00000512928 TAF7LQ5H9L4 462 aa8.23□□□□□ -1.09
KDM3B-208ENST00000512928 MAP1SQ66K74 1059 aaPredicted RBP8.23□□□□□ -1.09
KDM3B-208ENST00000512928 MRPL50Q8N5N7 158 aaKnown RBP8.23□□□□□ -1.09
KDM3B-208ENST00000512928 SSH1Q8WYL5 1049 aa8.23□□□□□ -1.09
KDM3B-208ENST00000512928 FBXW7Q969H0 707 aa8.23□□□□□ -1.09
KDM3B-208ENST00000512928 GPRC5DQ9NZD1 345 aa8.23□□□□□ -1.09
KDM3B-208ENST00000512928 PASKQ96RG2 1323 aa8.23□□□□□ -1.09
KDM3B-208ENST00000512928 MYH3P11055 1940 aa8.23□□□□□ -1.09
KDM3B-208ENST00000512928 YDJCA8MPS7 323 aa8.22□□□□□ -1.09
KDM3B-208ENST00000512928 PSMD14O00487 310 aa8.22□□□□□ -1.09
KDM3B-208ENST00000512928 VEGFBP49765 207 aa8.22□□□□□ -1.09
KDM3B-208ENST00000512928 HNRNPUQ00839 825 aaKnown RBP eCLIP8.22□□□□□ -1.09
KDM3B-208ENST00000512928 IFIT5Q13325 482 aaKnown RBP8.22□□□□□ -1.09
KDM3B-208ENST00000512928 ADARB2Q9NS39 739 aaKnown RBP8.22□□□□□ -1.09
KDM3B-208ENST00000512928 BSDC1Q9NW68 430 aaPredicted RBP8.22□□□□□ -1.09
KDM3B-208ENST00000512928 PODXL2Q9NZ53 605 aa8.22□□□□□ -1.09
KDM3B-208ENST00000512928 ZBTB12Q9Y330 459 aaPredicted RBP8.22□□□□□ -1.09
KDM3B-208ENST00000512928 PTPRCP08575 1304 aa8.22□□□□□ -1.09
KDM3B-208ENST00000512928 CNTNAP1P78357 1384 aa8.22□□□□□ -1.09
KDM3B-208ENST00000512928 RTL9Q8NET4 1388 aa8.22□□□□□ -1.09
KDM3B-208ENST00000512928 H7C1D1 291 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 ALDH1L1O75891 902 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 ITGBL1O95965 494 aaPredicted RBP8.21□□□□□ -1.1
KDM3B-208ENST00000512928 ATP2B4P23634 1241 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 CASP7P55210 303 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 CCDC57Q2TAC2 916 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 RBM26Q5T8P6 1007 aaKnown RBP8.21□□□□□ -1.1
KDM3B-208ENST00000512928 LMBR1LQ6UX01 489 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 USP50Q70EL3 339 aaPredicted RBP8.21□□□□□ -1.1
KDM3B-208ENST00000512928 MICALL2Q8IY33 904 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 TRMT2AQ8IZ69 625 aaKnown RBP8.21□□□□□ -1.1
KDM3B-208ENST00000512928 CNTROBQ8N137 903 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 PLA2G12BQ9BX93 195 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 KCNQ5Q9NR82 932 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 CNNM1Q9NRU3 951 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 CREBZFQ9NS37 354 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 CNOT7Q9UIV1 285 aaKnown RBP8.21□□□□□ -1.1
KDM3B-208ENST00000512928 TSKSQ9UJT2 592 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 MINPP1Q9UNW1 487 aa8.21□□□□□ -1.1
KDM3B-208ENST00000512928 SHTN1A0MZ66 631 aa8.2□□□□□ -1.1
KDM3B-208ENST00000512928 WTIPA6NIX2 430 aaPredicted RBP8.2□□□□□ -1.1
KDM3B-208ENST00000512928 PLIN1O60240 522 aa8.2□□□□□ -1.1
KDM3B-208ENST00000512928 CSF1RP07333 972 aa8.2□□□□□ -1.1
KDM3B-208ENST00000512928 CCT4P50991 539 aaKnown RBP8.2□□□□□ -1.1
KDM3B-208ENST00000512928 LBX1P52954 281 aa8.2□□□□□ -1.1
KDM3B-208ENST00000512928 FOXO4P98177 505 aa8.2□□□□□ -1.1
KDM3B-208ENST00000512928 ALDH1L2Q3SY69 923 aa8.2□□□□□ -1.1
KDM3B-208ENST00000512928 TBC1D10BQ4KMP7 808 aaPredicted RBP8.2□□□□□ -1.1
KDM3B-208ENST00000512928 EPHA10Q5JZY3 1008 aa8.2□□□□□ -1.1
KDM3B-208ENST00000512928 ZNF594Q96JF6 807 aaPredicted RBP8.2□□□□□ -1.1
KDM3B-208ENST00000512928 ANKRD2Q9GZV1 360 aa8.2□□□□□ -1.1
KDM3B-208ENST00000512928 ABT1Q9ULW3 272 aaKnown RBP8.2□□□□□ -1.1
KDM3B-208ENST00000512928 TMEM88BA6NKF7 163 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 TRAF5O00463 557 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 TAF5LO75529 589 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 NBPF7P0C2Y1 421 aaPredicted RBP8.19□□□□□ -1.1
KDM3B-208ENST00000512928 CHRNDQ07001 517 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 GRM1Q13255 1194 aa8.19□□□□□ -1.1
KDM3B-208ENST00000512928 DLK2Q6UY11 383 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms