RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 CELF1Q92879 486 aaKnown RBP16.47■□□□□ 0.23
DDX41-215ENST00000512431 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
DDX41-215ENST00000512431 BABAM1Q9NWV8 329 aa16.47■□□□□ 0.23
DDX41-215ENST00000512431 LAMB2P55268 1798 aa16.46■□□□□ 0.23
DDX41-215ENST00000512431 TBC1D8O95759 1140 aa16.46■□□□□ 0.23
DDX41-215ENST00000512431 SCARF1Q14162 830 aa16.46■□□□□ 0.23
DDX41-215ENST00000512431 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.23
DDX41-215ENST00000512431 ANGEL2Q5VTE6 544 aaKnown RBP16.46■□□□□ 0.23
DDX41-215ENST00000512431 TBC1D16Q8TBP0 767 aa16.46■□□□□ 0.23
DDX41-215ENST00000512431 ZNF296Q8WUU4 475 aaPredicted RBP16.46■□□□□ 0.23
DDX41-215ENST00000512431 RTL9Q8NET4 1388 aa16.46■□□□□ 0.23
DDX41-215ENST00000512431 FBXO46Q6PJ61 603 aaPredicted RBP16.45■□□□□ 0.22
DDX41-215ENST00000512431 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
DDX41-215ENST00000512431 FAM89AQ96GI7 184 aa16.45■□□□□ 0.22
DDX41-215ENST00000512431 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
DDX41-215ENST00000512431 ASTN2O75129 1339 aaPredicted RBP16.45■□□□□ 0.22
DDX41-215ENST00000512431 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
DDX41-215ENST00000512431 AGBL3Q8NEM8 1001 aa16.44■□□□□ 0.22
DDX41-215ENST00000512431 POLR2AP24928 1970 aaKnown RBP16.44■□□□□ 0.22
DDX41-215ENST00000512431 LRRC37AA6NMS7 1700 aa16.43■□□□□ 0.22
DDX41-215ENST00000512431 ZNF280AP59817 542 aaPredicted RBP16.43■□□□□ 0.22
DDX41-215ENST00000512431 TTLL12Q14166 644 aaPredicted RBP16.43■□□□□ 0.22
DDX41-215ENST00000512431 RSBN1LQ6PCB5 846 aaPredicted RBP16.43■□□□□ 0.22
DDX41-215ENST00000512431 ANKIB1Q9P2G1 1089 aa16.43■□□□□ 0.22
DDX41-215ENST00000512431 PITPNM2Q9BZ72 1349 aa16.43■□□□□ 0.22
DDX41-215ENST00000512431 GPR25O00155 361 aa16.42■□□□□ 0.22
DDX41-215ENST00000512431 UFL1O94874 794 aa16.42■□□□□ 0.22
DDX41-215ENST00000512431 RIPK4P57078 832 aa16.42■□□□□ 0.22
DDX41-215ENST00000512431 NOM1Q5C9Z4 860 aaKnown RBP16.42■□□□□ 0.22
DDX41-215ENST00000512431 ANKRD13DQ6ZTN6 518 aa16.42■□□□□ 0.22
DDX41-215ENST00000512431 PLBD2Q8NHP8 589 aa16.42■□□□□ 0.22
DDX41-215ENST00000512431 MYOZ2Q9NPC6 264 aa16.42■□□□□ 0.22
DDX41-215ENST00000512431 GGA1Q9UJY5 639 aa16.42■□□□□ 0.22
DDX41-215ENST00000512431 TAF1P21675 1872 aa16.42■□□□□ 0.22
DDX41-215ENST00000512431 UBE2Q2LH0YL09 131 aa16.41■□□□□ 0.22
DDX41-215ENST00000512431 USP17L8P0C7I0 530 aa16.41■□□□□ 0.22
DDX41-215ENST00000512431 HSP90B1P14625 803 aaKnown RBP16.41■□□□□ 0.22
DDX41-215ENST00000512431 NF2P35240 595 aa16.41■□□□□ 0.22
DDX41-215ENST00000512431 TM4SF4P48230 202 aa16.41■□□□□ 0.22
DDX41-215ENST00000512431 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
DDX41-215ENST00000512431 SREBF2Q12772 1141 aa16.41■□□□□ 0.22
DDX41-215ENST00000512431 RTL5Q5HYW3 569 aaPredicted RBP16.41■□□□□ 0.22
DDX41-215ENST00000512431 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
DDX41-215ENST00000512431 DDX60Q8IY21 1712 aaKnown RBP16.4■□□□□ 0.22
DDX41-215ENST00000512431 ATP5J2-PTCD1G3V325 749 aa16.4■□□□□ 0.22
DDX41-215ENST00000512431 IRS4O14654 1257 aaPredicted RBP16.4■□□□□ 0.22
DDX41-215ENST00000512431 FKTNO75072 461 aa16.4■□□□□ 0.22
DDX41-215ENST00000512431 MOB2Q70IA6 237 aa16.4■□□□□ 0.22
DDX41-215ENST00000512431 ISCA1Q9BUE6 129 aa16.4■□□□□ 0.22
DDX41-215ENST00000512431 PAPPA2Q9BXP8 1791 aa16.4■□□□□ 0.22
DDX41-215ENST00000512431 CHPF2Q9P2E5 772 aa16.39■□□□□ 0.21
DDX41-215ENST00000512431 USP17L3A6NCW0 530 aa16.38■□□□□ 0.21
DDX41-215ENST00000512431 USP17L4A6NCW7 530 aa16.38■□□□□ 0.21
DDX41-215ENST00000512431 USP17L1Q7RTZ2 530 aa16.38■□□□□ 0.21
DDX41-215ENST00000512431 ZNF609O15014 1411 aa16.37■□□□□ 0.21
DDX41-215ENST00000512431 MKRN3Q13064 507 aaKnown RBP16.37■□□□□ 0.21
DDX41-215ENST00000512431 HABP4Q5JVS0 413 aaKnown RBP16.37■□□□□ 0.21
DDX41-215ENST00000512431 HDGFL1Q5TGJ6 251 aa16.37■□□□□ 0.21
DDX41-215ENST00000512431 PRAMEF18Q5VWM3 479 aa16.37■□□□□ 0.21
DDX41-215ENST00000512431 PODNQ7Z5L7 613 aa16.37■□□□□ 0.21
DDX41-215ENST00000512431 OGFOD1Q8N543 542 aa16.37■□□□□ 0.21
DDX41-215ENST00000512431 DBF4Q9UBU7 674 aaPredicted RBP16.37■□□□□ 0.21
DDX41-215ENST00000512431 ALDH1A1P00352 501 aa16.36■□□□□ 0.21
DDX41-215ENST00000512431 INTS3Q68E01 1043 aaKnown RBP16.36■□□□□ 0.21
DDX41-215ENST00000512431 ARMC9Q7Z3E5 817 aa16.36■□□□□ 0.21
DDX41-215ENST00000512431 GMLQ99445 158 aa16.36■□□□□ 0.21
DDX41-215ENST00000512431 SCAF8Q9UPN6 1271 aaKnown RBP16.36■□□□□ 0.21
DDX41-215ENST00000512431 LAS1LQ9Y4W2 734 aaKnown RBP16.36■□□□□ 0.21
DDX41-215ENST00000512431 TRIM28Q13263 835 aaKnown RBP16.35■□□□□ 0.21
DDX41-215ENST00000512431 CCDC152Q4G0S7 254 aa16.35■□□□□ 0.21
DDX41-215ENST00000512431 CFHR5Q9BXR6 569 aa16.35■□□□□ 0.21
DDX41-215ENST00000512431 SEC31BQ9NQW1 1179 aa16.35■□□□□ 0.21
DDX41-215ENST00000512431 HYPKQ9NX55 129 aa16.35■□□□□ 0.21
DDX41-215ENST00000512431 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
DDX41-215ENST00000512431 TMPOP42166 694 aaKnown RBP16.34■□□□□ 0.21
DDX41-215ENST00000512431 NBPF9Q3BBW0 867 aa16.34■□□□□ 0.21
DDX41-215ENST00000512431 RIC3Q7Z5B4 369 aa16.34■□□□□ 0.21
DDX41-215ENST00000512431 ZBTB38Q8NAP3 1195 aaPredicted RBP16.34■□□□□ 0.21
DDX41-215ENST00000512431 XDHP47989 1333 aa16.34■□□□□ 0.21
DDX41-215ENST00000512431 HOXB7P09629 217 aa16.33■□□□□ 0.2
DDX41-215ENST00000512431 INHBEP58166 350 aa16.33■□□□□ 0.2
DDX41-215ENST00000512431 KRT24Q2M2I5 525 aa16.33■□□□□ 0.2
DDX41-215ENST00000512431 ANKRD18AQ8IVF6 992 aa16.33■□□□□ 0.2
DDX41-215ENST00000512431 FBXW7Q969H0 707 aa16.33■□□□□ 0.2
DDX41-215ENST00000512431 TRIM17Q9Y577 477 aa16.33■□□□□ 0.2
DDX41-215ENST00000512431 CHL1O00533 1208 aa16.32■□□□□ 0.2
DDX41-215ENST00000512431 PDE8AO60658 829 aa16.32■□□□□ 0.2
DDX41-215ENST00000512431 PRKG1Q13976 671 aa16.32■□□□□ 0.2
DDX41-215ENST00000512431 SCN9AQ15858 1988 aa16.32■□□□□ 0.2
DDX41-215ENST00000512431 MYO3BQ8WXR4 1341 aa16.32■□□□□ 0.2
DDX41-215ENST00000512431 MANSC4A6NHS7 340 aaPredicted RBP16.31■□□□□ 0.2
DDX41-215ENST00000512431 WNT10BO00744 389 aa16.31■□□□□ 0.2
DDX41-215ENST00000512431 MMP14P50281 582 aa16.31■□□□□ 0.2
DDX41-215ENST00000512431 PTPN12Q05209 780 aaKnown RBP16.31■□□□□ 0.2
DDX41-215ENST00000512431 GOLGA2Q08379 1002 aa16.31■□□□□ 0.2
DDX41-215ENST00000512431 NEUROD2Q15784 382 aa16.31■□□□□ 0.2
DDX41-215ENST00000512431 SPRYD7Q5W111 196 aa16.3■□□□□ 0.2
DDX41-215ENST00000512431 APOBEC3FQ8IUX4 373 aaKnown RBP16.3■□□□□ 0.2
DDX41-215ENST00000512431 CCDC85AQ96PX6 553 aaPredicted RBP16.3■□□□□ 0.2
DDX41-215ENST00000512431 R3HDMLQ9H3Y0 253 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms