RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PRPF38BQ5VTL8 546 aaKnown RBP25.01■■□□□ 1.59
HMGCS1-206ENST00000511774 VIL1P09327 827 aaKnown RBP25■■□□□ 1.59
HMGCS1-206ENST00000511774 SF3B3Q15393 1217 aaKnown RBP25■■□□□ 1.59
HMGCS1-206ENST00000511774 TBC1D16Q8TBP0 767 aa25■■□□□ 1.59
HMGCS1-206ENST00000511774 HPS5Q9UPZ3 1129 aa25■■□□□ 1.59
HMGCS1-206ENST00000511774 PSME4Q14997 1843 aa24.99■■□□□ 1.59
HMGCS1-206ENST00000511774 ISCA1Q9BUE6 129 aa24.99■■□□□ 1.59
HMGCS1-206ENST00000511774 MAPK8IP3Q9UPT6 1336 aa24.99■■□□□ 1.59
HMGCS1-206ENST00000511774 MOB2Q70IA6 237 aa24.98■■□□□ 1.59
HMGCS1-206ENST00000511774 SULF1Q8IWU6 871 aa24.98■■□□□ 1.59
HMGCS1-206ENST00000511774 ATP5J2-PTCD1G3V325 749 aa24.97■■□□□ 1.59
HMGCS1-206ENST00000511774 RIPK4P57078 832 aa24.97■■□□□ 1.59
HMGCS1-206ENST00000511774 RTL5Q5HYW3 569 aaPredicted RBP24.97■■□□□ 1.59
HMGCS1-206ENST00000511774 CHPF2Q9P2E5 772 aa24.97■■□□□ 1.59
HMGCS1-206ENST00000511774 SCAF8Q9UPN6 1271 aaKnown RBP24.97■■□□□ 1.59
HMGCS1-206ENST00000511774 PAPPA2Q9BXP8 1791 aa24.96■■□□□ 1.59
HMGCS1-206ENST00000511774 ANGEL2Q5VTE6 544 aaKnown RBP24.96■■□□□ 1.59
HMGCS1-206ENST00000511774 ZNF280AP59817 542 aaPredicted RBP24.95■■□□□ 1.58
HMGCS1-206ENST00000511774 BABAM1Q9NWV8 329 aa24.95■■□□□ 1.58
HMGCS1-206ENST00000511774 HTTP42858 3142 aa24.94■■□□□ 1.58
HMGCS1-206ENST00000511774 SCARF1Q14162 830 aa24.94■■□□□ 1.58
HMGCS1-206ENST00000511774 PLBD2Q8NHP8 589 aa24.94■■□□□ 1.58
HMGCS1-206ENST00000511774 EYA3Q99504 573 aa24.94■■□□□ 1.58
HMGCS1-206ENST00000511774 SEC31BQ9NQW1 1179 aa24.94■■□□□ 1.58
HMGCS1-206ENST00000511774 MKI67P46013 3256 aaKnown RBP24.94■■□□□ 1.58
HMGCS1-206ENST00000511774 ZNF296Q8WUU4 475 aaPredicted RBP24.93■■□□□ 1.58
HMGCS1-206ENST00000511774 TBC1D8O95759 1140 aa24.92■■□□□ 1.58
HMGCS1-206ENST00000511774 RPS8P62241 208 aaKnown RBP24.92■■□□□ 1.58
HMGCS1-206ENST00000511774 GMLQ99445 158 aa24.92■■□□□ 1.58
HMGCS1-206ENST00000511774 ZNF609O15014 1411 aa24.92■■□□□ 1.58
HMGCS1-206ENST00000511774 TMPOP42166 694 aaKnown RBP24.91■■□□□ 1.58
HMGCS1-206ENST00000511774 PODXL2Q9NZ53 605 aa24.91■■□□□ 1.58
HMGCS1-206ENST00000511774 ZNF646O15015 1829 aaPredicted RBP24.91■■□□□ 1.58
HMGCS1-206ENST00000511774 IRS4O14654 1257 aaPredicted RBP24.9■■□□□ 1.58
HMGCS1-206ENST00000511774 UFL1O94874 794 aa24.9■■□□□ 1.58
HMGCS1-206ENST00000511774 PRAMEF18Q5VWM3 479 aa24.9■■□□□ 1.58
HMGCS1-206ENST00000511774 RSBN1LQ6PCB5 846 aaPredicted RBP24.9■■□□□ 1.58
HMGCS1-206ENST00000511774 ANKRD13DQ6ZTN6 518 aa24.9■■□□□ 1.58
HMGCS1-206ENST00000511774 ZC3H12CQ9C0D7 883 aaKnown RBP24.9■■□□□ 1.58
HMGCS1-206ENST00000511774 UBE2Q2LH0YL09 131 aa24.89■■□□□ 1.58
HMGCS1-206ENST00000511774 CHL1O00533 1208 aa24.89■■□□□ 1.58
HMGCS1-206ENST00000511774 WTIPA6NIX2 430 aaPredicted RBP24.88■■□□□ 1.57
HMGCS1-206ENST00000511774 REM2Q8IYK8 340 aaPredicted RBP24.88■■□□□ 1.57
HMGCS1-206ENST00000511774 PNNQ9H307 717 aaKnown RBP24.88■■□□□ 1.57
HMGCS1-206ENST00000511774 FKBP1BP68106 108 aa24.87■■□□□ 1.57
HMGCS1-206ENST00000511774 AGBL3Q8NEM8 1001 aa24.87■■□□□ 1.57
HMGCS1-206ENST00000511774 R3HDMLQ9H3Y0 253 aa24.87■■□□□ 1.57
HMGCS1-206ENST00000511774 HDGFL1Q5TGJ6 251 aa24.86■■□□□ 1.57
HMGCS1-206ENST00000511774 MYOZ2Q9NPC6 264 aa24.86■■□□□ 1.57
HMGCS1-206ENST00000511774 CENPFP49454 3210 aa24.86■■□□□ 1.57
HMGCS1-206ENST00000511774 TRIM28Q13263 835 aaKnown RBP24.85■■□□□ 1.57
HMGCS1-206ENST00000511774 PKN2Q16513 984 aaKnown RBP24.85■■□□□ 1.57
HMGCS1-206ENST00000511774 ANKIB1Q9P2G1 1089 aa24.85■■□□□ 1.57
HMGCS1-206ENST00000511774 GGA1Q9UJY5 639 aa24.85■■□□□ 1.57
HMGCS1-206ENST00000511774 HDAC9Q9UKV0 1011 aa24.85■■□□□ 1.57
HMGCS1-206ENST00000511774 PITPNM2Q9BZ72 1349 aa24.85■■□□□ 1.57
HMGCS1-206ENST00000511774 GPR25O00155 361 aa24.84■■□□□ 1.57
HMGCS1-206ENST00000511774 USP17L8P0C7I0 530 aa24.83■■□□□ 1.57
HMGCS1-206ENST00000511774 TM4SF4P48230 202 aa24.83■■□□□ 1.57
HMGCS1-206ENST00000511774 MKRN3Q13064 507 aaKnown RBP24.83■■□□□ 1.57
HMGCS1-206ENST00000511774 NBPF9Q3BBW0 867 aa24.83■■□□□ 1.57
HMGCS1-206ENST00000511774 JARID2Q92833 1246 aaPredicted RBP24.83■■□□□ 1.57
HMGCS1-206ENST00000511774 MXD3Q9BW11 206 aa24.83■■□□□ 1.57
HMGCS1-206ENST00000511774 TRIM35Q9UPQ4 493 aa24.83■■□□□ 1.57
HMGCS1-206ENST00000511774 LAS1LQ9Y4W2 734 aaKnown RBP24.83■■□□□ 1.57
HMGCS1-206ENST00000511774 G3V3G9 751 aa24.82■■□□□ 1.56
HMGCS1-206ENST00000511774 NEUROD2Q15784 382 aa24.82■■□□□ 1.56
HMGCS1-206ENST00000511774 DCAF8Q5TAQ9 597 aa24.82■■□□□ 1.56
HMGCS1-206ENST00000511774 CCDC85AQ96PX6 553 aaPredicted RBP24.82■■□□□ 1.56
HMGCS1-206ENST00000511774 LMOD3Q0VAK6 560 aa24.81■■□□□ 1.56
HMGCS1-206ENST00000511774 CCDC146Q8IYE0 955 aa24.81■■□□□ 1.56
HMGCS1-206ENST00000511774 DBF4Q9UBU7 674 aaPredicted RBP24.81■■□□□ 1.56
HMGCS1-206ENST00000511774 BRCA2P51587 3418 aa24.8■■□□□ 1.56
HMGCS1-206ENST00000511774 FBXO46Q6PJ61 603 aaPredicted RBP24.8■■□□□ 1.56
HMGCS1-206ENST00000511774 ZBTB38Q8NAP3 1195 aaPredicted RBP24.8■■□□□ 1.56
HMGCS1-206ENST00000511774 SPEF2Q9C093 1822 aa24.79■■□□□ 1.56
HMGCS1-206ENST00000511774 KIAA0100Q14667 2235 aaKnown RBP24.78■■□□□ 1.56
HMGCS1-206ENST00000511774 USP17L3A6NCW0 530 aa24.78■■□□□ 1.56
HMGCS1-206ENST00000511774 USP17L4A6NCW7 530 aa24.78■■□□□ 1.56
HMGCS1-206ENST00000511774 HOXB7P09629 217 aa24.78■■□□□ 1.56
HMGCS1-206ENST00000511774 NOM1Q5C9Z4 860 aaKnown RBP24.78■■□□□ 1.56
HMGCS1-206ENST00000511774 USP17L1Q7RTZ2 530 aa24.78■■□□□ 1.56
HMGCS1-206ENST00000511774 HYPKQ9NX55 129 aa24.78■■□□□ 1.56
HMGCS1-206ENST00000511774 PTPN12Q05209 780 aaKnown RBP24.77■■□□□ 1.56
HMGCS1-206ENST00000511774 PHAXQ9H814 394 aaKnown RBP24.77■■□□□ 1.56
HMGCS1-206ENST00000511774 XDHP47989 1333 aa24.77■■□□□ 1.56
HMGCS1-206ENST00000511774 TTLL12Q14166 644 aaPredicted RBP24.76■■□□□ 1.55
HMGCS1-206ENST00000511774 DUSP27Q5VZP5 1158 aa24.76■■□□□ 1.55
HMGCS1-206ENST00000511774 WNT10BO00744 389 aa24.75■■□□□ 1.55
HMGCS1-206ENST00000511774 DACT2Q5SW24 774 aa24.75■■□□□ 1.55
HMGCS1-206ENST00000511774 MYD88Q99836 296 aa24.75■■□□□ 1.55
HMGCS1-206ENST00000511774 CFHR5Q9BXR6 569 aa24.75■■□□□ 1.55
HMGCS1-206ENST00000511774 FZD1Q9UP38 647 aa24.75■■□□□ 1.55
HMGCS1-206ENST00000511774 FKTNO75072 461 aa24.74■■□□□ 1.55
HMGCS1-206ENST00000511774 PCCAP05165 728 aaPredicted RBP24.74■■□□□ 1.55
HMGCS1-206ENST00000511774 PRKG1Q13976 671 aa24.74■■□□□ 1.55
HMGCS1-206ENST00000511774 CCDC152Q4G0S7 254 aa24.74■■□□□ 1.55
HMGCS1-206ENST00000511774 RIC3Q7Z5B4 369 aa24.74■■□□□ 1.55
HMGCS1-206ENST00000511774 PODNQ7Z5L7 613 aa24.74■■□□□ 1.55
HMGCS1-206ENST00000511774 POTEFA5A3E0 1075 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms