RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 PRPF38BQ5VTL8 546 aaKnown RBP17.34■□□□□ 0.37
POLR2J3-216ENST00000511773 EYA3Q99504 573 aa17.34■□□□□ 0.37
POLR2J3-216ENST00000511773 RIPK4P57078 832 aa17.33■□□□□ 0.36
POLR2J3-216ENST00000511773 FAM89AQ96GI7 184 aa17.33■□□□□ 0.36
POLR2J3-216ENST00000511773 KRT24Q2M2I5 525 aa17.32■□□□□ 0.36
POLR2J3-216ENST00000511773 RASAL3Q86YV0 1011 aa17.32■□□□□ 0.36
POLR2J3-216ENST00000511773 PNNQ9H307 717 aaKnown RBP17.32■□□□□ 0.36
POLR2J3-216ENST00000511773 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
POLR2J3-216ENST00000511773 HPS5Q9UPZ3 1129 aa17.32■□□□□ 0.36
POLR2J3-216ENST00000511773 ATP5J2-PTCD1G3V325 749 aa17.31■□□□□ 0.36
POLR2J3-216ENST00000511773 G3V3G9 751 aa17.31■□□□□ 0.36
POLR2J3-216ENST00000511773 DCAF8Q5TAQ9 597 aa17.31■□□□□ 0.36
POLR2J3-216ENST00000511773 ANGEL2Q5VTE6 544 aaKnown RBP17.31■□□□□ 0.36
POLR2J3-216ENST00000511773 TBC1D16Q8TBP0 767 aa17.31■□□□□ 0.36
POLR2J3-216ENST00000511773 SF3B3Q15393 1217 aaKnown RBP17.3■□□□□ 0.36
POLR2J3-216ENST00000511773 ZC3H12CQ9C0D7 883 aaKnown RBP17.3■□□□□ 0.36
POLR2J3-216ENST00000511773 SCAF8Q9UPN6 1271 aaKnown RBP17.3■□□□□ 0.36
POLR2J3-216ENST00000511773 PAPPA2Q9BXP8 1791 aa17.3■□□□□ 0.36
POLR2J3-216ENST00000511773 UFL1O94874 794 aa17.29■□□□□ 0.36
POLR2J3-216ENST00000511773 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-216ENST00000511773 SCARF1Q14162 830 aa17.29■□□□□ 0.36
POLR2J3-216ENST00000511773 MOB2Q70IA6 237 aa17.29■□□□□ 0.36
POLR2J3-216ENST00000511773 HDAC9Q9UKV0 1011 aa17.29■□□□□ 0.36
POLR2J3-216ENST00000511773 TBC1D8O95759 1140 aa17.28■□□□□ 0.36
POLR2J3-216ENST00000511773 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
POLR2J3-216ENST00000511773 PLBD2Q8NHP8 589 aa17.28■□□□□ 0.36
POLR2J3-216ENST00000511773 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
POLR2J3-216ENST00000511773 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
POLR2J3-216ENST00000511773 LAS1LQ9Y4W2 734 aaKnown RBP17.28■□□□□ 0.36
POLR2J3-216ENST00000511773 IRS4O14654 1257 aaPredicted RBP17.27■□□□□ 0.36
POLR2J3-216ENST00000511773 RPS8P62241 208 aaKnown RBP17.27■□□□□ 0.36
POLR2J3-216ENST00000511773 HDGFL1Q5TGJ6 251 aa17.27■□□□□ 0.36
POLR2J3-216ENST00000511773 ANKRD13DQ6ZTN6 518 aa17.27■□□□□ 0.36
POLR2J3-216ENST00000511773 ZNF296Q8WUU4 475 aaPredicted RBP17.27■□□□□ 0.36
POLR2J3-216ENST00000511773 ISCA1Q9BUE6 129 aa17.27■□□□□ 0.36
POLR2J3-216ENST00000511773 TMPOP42166 694 aaKnown RBP17.26■□□□□ 0.35
POLR2J3-216ENST00000511773 ZNF280AP59817 542 aaPredicted RBP17.26■□□□□ 0.35
POLR2J3-216ENST00000511773 LMOD3Q0VAK6 560 aa17.26■□□□□ 0.35
POLR2J3-216ENST00000511773 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
POLR2J3-216ENST00000511773 UBE2Q2LH0YL09 131 aa17.25■□□□□ 0.35
POLR2J3-216ENST00000511773 FKBP1BP68106 108 aa17.25■□□□□ 0.35
POLR2J3-216ENST00000511773 NEUROD2Q15784 382 aa17.25■□□□□ 0.35
POLR2J3-216ENST00000511773 MYOZ2Q9NPC6 264 aa17.25■□□□□ 0.35
POLR2J3-216ENST00000511773 SEC31BQ9NQW1 1179 aa17.25■□□□□ 0.35
POLR2J3-216ENST00000511773 GGA1Q9UJY5 639 aa17.25■□□□□ 0.35
POLR2J3-216ENST00000511773 PSME4Q14997 1843 aa17.25■□□□□ 0.35
POLR2J3-216ENST00000511773 MKRN3Q13064 507 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-216ENST00000511773 TTLL12Q14166 644 aaPredicted RBP17.24■□□□□ 0.35
POLR2J3-216ENST00000511773 PKN2Q16513 984 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-216ENST00000511773 PRAMEF18Q5VWM3 479 aa17.24■□□□□ 0.35
POLR2J3-216ENST00000511773 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
POLR2J3-216ENST00000511773 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
POLR2J3-216ENST00000511773 AGBL3Q8NEM8 1001 aa17.23■□□□□ 0.35
POLR2J3-216ENST00000511773 CCDC85AQ96PX6 553 aaPredicted RBP17.23■□□□□ 0.35
POLR2J3-216ENST00000511773 ZNF609O15014 1411 aa17.22■□□□□ 0.35
POLR2J3-216ENST00000511773 CCDC146Q8IYE0 955 aa17.22■□□□□ 0.35
POLR2J3-216ENST00000511773 DBF4Q9UBU7 674 aaPredicted RBP17.22■□□□□ 0.35
POLR2J3-216ENST00000511773 PITPNM2Q9BZ72 1349 aa17.21■□□□□ 0.35
POLR2J3-216ENST00000511773 CHL1O00533 1208 aa17.21■□□□□ 0.35
POLR2J3-216ENST00000511773 GMLQ99445 158 aa17.21■□□□□ 0.35
POLR2J3-216ENST00000511773 GPR25O00155 361 aa17.2■□□□□ 0.34
POLR2J3-216ENST00000511773 FBXO46Q6PJ61 603 aaPredicted RBP17.2■□□□□ 0.34
POLR2J3-216ENST00000511773 ZBTB38Q8NAP3 1195 aaPredicted RBP17.2■□□□□ 0.34
POLR2J3-216ENST00000511773 HYPKQ9NX55 129 aa17.2■□□□□ 0.34
POLR2J3-216ENST00000511773 USP17L3A6NCW0 530 aa17.19■□□□□ 0.34
POLR2J3-216ENST00000511773 USP17L4A6NCW7 530 aa17.19■□□□□ 0.34
POLR2J3-216ENST00000511773 NBPF9Q3BBW0 867 aa17.19■□□□□ 0.34
POLR2J3-216ENST00000511773 CCDC152Q4G0S7 254 aa17.19■□□□□ 0.34
POLR2J3-216ENST00000511773 USP17L1Q7RTZ2 530 aa17.19■□□□□ 0.34
POLR2J3-216ENST00000511773 RIC3Q7Z5B4 369 aa17.19■□□□□ 0.34
POLR2J3-216ENST00000511773 JARID2Q92833 1246 aaPredicted RBP17.19■□□□□ 0.34
POLR2J3-216ENST00000511773 FBXW7Q969H0 707 aa17.19■□□□□ 0.34
POLR2J3-216ENST00000511773 MXD3Q9BW11 206 aa17.19■□□□□ 0.34
POLR2J3-216ENST00000511773 XDHP47989 1333 aa17.19■□□□□ 0.34
POLR2J3-216ENST00000511773 GOLGA2Q08379 1002 aa17.18■□□□□ 0.34
POLR2J3-216ENST00000511773 TRIM28Q13263 835 aaKnown RBP17.18■□□□□ 0.34
POLR2J3-216ENST00000511773 PRKG1Q13976 671 aa17.18■□□□□ 0.34
POLR2J3-216ENST00000511773 SPEF2Q9C093 1822 aa17.18■□□□□ 0.34
POLR2J3-216ENST00000511773 WTIPA6NIX2 430 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-216ENST00000511773 FKTNO75072 461 aa17.17■□□□□ 0.34
POLR2J3-216ENST00000511773 HOXB7P09629 217 aa17.17■□□□□ 0.34
POLR2J3-216ENST00000511773 NF2P35240 595 aa17.17■□□□□ 0.34
POLR2J3-216ENST00000511773 TM4SF4P48230 202 aa17.17■□□□□ 0.34
POLR2J3-216ENST00000511773 SREBF2Q12772 1141 aa17.17■□□□□ 0.34
POLR2J3-216ENST00000511773 DUSP27Q5VZP5 1158 aa17.17■□□□□ 0.34
POLR2J3-216ENST00000511773 MYD88Q99836 296 aa17.17■□□□□ 0.34
POLR2J3-216ENST00000511773 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
POLR2J3-216ENST00000511773 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-216ENST00000511773 SASH1O94885 1247 aa17.16■□□□□ 0.34
POLR2J3-216ENST00000511773 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
POLR2J3-216ENST00000511773 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
POLR2J3-216ENST00000511773 TRIM35Q9UPQ4 493 aa17.16■□□□□ 0.34
POLR2J3-216ENST00000511773 PDE8AO60658 829 aa17.15■□□□□ 0.34
POLR2J3-216ENST00000511773 ATP2B4P23634 1241 aa17.15■□□□□ 0.34
POLR2J3-216ENST00000511773 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
POLR2J3-216ENST00000511773 OGFOD1Q8N543 542 aa17.15■□□□□ 0.34
POLR2J3-216ENST00000511773 GCC1Q96CN9 775 aa17.15■□□□□ 0.34
POLR2J3-216ENST00000511773 ZNF646O15015 1829 aaPredicted RBP17.14■□□□□ 0.34
POLR2J3-216ENST00000511773 HTTP42858 3142 aa17.14■□□□□ 0.34
POLR2J3-216ENST00000511773 WNT10BO00744 389 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms