RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 IFIT5Q13325 482 aaKnown RBP17.62■□□□□ 0.41
DDX41-212ENST00000511040 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
DDX41-212ENST00000511040 USP44Q9H0E7 712 aa17.62■□□□□ 0.41
DDX41-212ENST00000511040 BSDC1Q9NW68 430 aaPredicted RBP17.62■□□□□ 0.41
DDX41-212ENST00000511040 GGA1Q9UJY5 639 aa17.62■□□□□ 0.41
DDX41-212ENST00000511040 MINPP1Q9UNW1 487 aa17.62■□□□□ 0.41
DDX41-212ENST00000511040 UTYO14607 1347 aa17.62■□□□□ 0.41
DDX41-212ENST00000511040 WDR90Q96KV7 1748 aa17.61■□□□□ 0.41
DDX41-212ENST00000511040 WTIPA6NIX2 430 aaPredicted RBP17.61■□□□□ 0.41
DDX41-212ENST00000511040 ZNF594Q96JF6 807 aaPredicted RBP17.61■□□□□ 0.41
DDX41-212ENST00000511040 MPHOSPH8Q99549 860 aa17.61■□□□□ 0.41
DDX41-212ENST00000511040 VPS33BQ9H267 617 aa17.61■□□□□ 0.41
DDX41-212ENST00000511040 BICC1Q9H694 974 aaKnown RBP17.61■□□□□ 0.41
DDX41-212ENST00000511040 PODXL2Q9NZ53 605 aa17.61■□□□□ 0.41
DDX41-212ENST00000511040 ZNRF3Q9ULT6 936 aa17.61■□□□□ 0.41
DDX41-212ENST00000511040 DOK7Q18PE1 504 aa17.6■□□□□ 0.41
DDX41-212ENST00000511040 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
DDX41-212ENST00000511040 EYA3Q99504 573 aa17.6■□□□□ 0.41
DDX41-212ENST00000511040 DBNDD1Q9H9R9 158 aa17.6■□□□□ 0.41
DDX41-212ENST00000511040 XDHP47989 1333 aa17.6■□□□□ 0.41
DDX41-212ENST00000511040 YDJCA8MPS7 323 aa17.59■□□□□ 0.41
DDX41-212ENST00000511040 IPO8O15397 1037 aaKnown RBP17.59■□□□□ 0.41
DDX41-212ENST00000511040 RAD17O75943 681 aa17.59■□□□□ 0.41
DDX41-212ENST00000511040 TOMM70O94826 608 aa17.59■□□□□ 0.41
DDX41-212ENST00000511040 TRIM27P14373 513 aa17.59■□□□□ 0.41
DDX41-212ENST00000511040 CXCL9Q07325 125 aa17.59■□□□□ 0.41
DDX41-212ENST00000511040 TAF7LQ5H9L4 462 aa17.59■□□□□ 0.41
DDX41-212ENST00000511040 ANKRD44Q8N8A2 993 aa17.59■□□□□ 0.41
DDX41-212ENST00000511040 ARHGAP45Q92619 1136 aa17.59■□□□□ 0.41
DDX41-212ENST00000511040 CLUAP1Q96AJ1 413 aa17.59■□□□□ 0.41
DDX41-212ENST00000511040 ATP2B4P23634 1241 aa17.58■□□□□ 0.4
DDX41-212ENST00000511040 GPC2Q8N158 579 aa17.58■□□□□ 0.4
DDX41-212ENST00000511040 L3MBTL3Q96JM7 780 aaPredicted RBP17.58■□□□□ 0.4
DDX41-212ENST00000511040 ZC3H12CQ9C0D7 883 aaKnown RBP17.58■□□□□ 0.4
DDX41-212ENST00000511040 ECE2O60344 883 aa17.57■□□□□ 0.4
DDX41-212ENST00000511040 CHRNDQ07001 517 aa17.57■□□□□ 0.4
DDX41-212ENST00000511040 ATF7IPQ6VMQ6 1270 aa17.57■□□□□ 0.4
DDX41-212ENST00000511040 HELBQ8NG08 1087 aaPredicted RBP17.57■□□□□ 0.4
DDX41-212ENST00000511040 G3V3G9 751 aa17.56■□□□□ 0.4
DDX41-212ENST00000511040 UBTFL1P0CB47 393 aaPredicted RBP17.56■□□□□ 0.4
DDX41-212ENST00000511040 RABL6Q3YEC7 729 aaPredicted RBP17.56■□□□□ 0.4
DDX41-212ENST00000511040 DCAF8Q5TAQ9 597 aa17.56■□□□□ 0.4
DDX41-212ENST00000511040 ZKSCAN2Q63HK3 967 aa17.56■□□□□ 0.4
DDX41-212ENST00000511040 CIAPIN1Q6FI81 312 aa17.56■□□□□ 0.4
DDX41-212ENST00000511040 RBM46Q8TBY0 533 aaKnown RBP17.56■□□□□ 0.4
DDX41-212ENST00000511040 MEIS3Q99687 375 aa17.56■□□□□ 0.4
DDX41-212ENST00000511040 KCNQ5Q9NR82 932 aa17.56■□□□□ 0.4
DDX41-212ENST00000511040 IQCA1LA6NCM1 817 aa17.55■□□□□ 0.4
DDX41-212ENST00000511040 SNAP23O00161 211 aa17.55■□□□□ 0.4
DDX41-212ENST00000511040 PLIN1O60240 522 aa17.55■□□□□ 0.4
DDX41-212ENST00000511040 TAF5LO75529 589 aa17.55■□□□□ 0.4
DDX41-212ENST00000511040 KLRK1P26718 216 aa17.55■□□□□ 0.4
DDX41-212ENST00000511040 INTS3Q68E01 1043 aaKnown RBP17.55■□□□□ 0.4
DDX41-212ENST00000511040 LDHAL6AQ6ZMR3 332 aa17.55■□□□□ 0.4
DDX41-212ENST00000511040 ANKRD2Q9GZV1 360 aa17.55■□□□□ 0.4
DDX41-212ENST00000511040 TAF1DQ9H5J8 278 aaPredicted RBP17.55■□□□□ 0.4
DDX41-212ENST00000511040 CNNM1Q9NRU3 951 aa17.55■□□□□ 0.4
DDX41-212ENST00000511040 HACL1Q9UJ83 578 aa17.55■□□□□ 0.4
DDX41-212ENST00000511040 POTEIP0CG38 1075 aa17.54■□□□□ 0.4
DDX41-212ENST00000511040 POTEJP0CG39 1038 aa17.54■□□□□ 0.4
DDX41-212ENST00000511040 KCNJ4P48050 445 aa17.54■□□□□ 0.4
DDX41-212ENST00000511040 GMPSP49915 693 aaPredicted RBP17.54■□□□□ 0.4
DDX41-212ENST00000511040 SCNN1DP51172 638 aa17.54■□□□□ 0.4
DDX41-212ENST00000511040 EAPPQ56P03 285 aaPredicted RBP17.54■□□□□ 0.4
DDX41-212ENST00000511040 KLHDC4Q8TBB5 520 aa17.54■□□□□ 0.4
DDX41-212ENST00000511040 PUS3Q9BZE2 481 aaKnown RBP17.54■□□□□ 0.4
DDX41-212ENST00000511040 LRRFIP2Q9Y608 721 aaKnown RBP17.54■□□□□ 0.4
DDX41-212ENST00000511040 ZNF804BA4D1E1 1349 aa17.53■□□□□ 0.4
DDX41-212ENST00000511040 PSMD14O00487 310 aa17.53■□□□□ 0.4
DDX41-212ENST00000511040 LMOD1P29536 600 aaPredicted RBP17.53■□□□□ 0.4
DDX41-212ENST00000511040 EPHX2P34913 555 aa17.53■□□□□ 0.4
DDX41-212ENST00000511040 EPS15P42566 896 aa17.53■□□□□ 0.4
DDX41-212ENST00000511040 TNIP1Q15025 636 aa17.53■□□□□ 0.4
DDX41-212ENST00000511040 TMEM57Q8N5G2 664 aa17.53■□□□□ 0.4
DDX41-212ENST00000511040 YTHDC1Q96MU7 727 aaKnown RBP17.53■□□□□ 0.4
DDX41-212ENST00000511040 LEMD3Q9Y2U8 911 aa17.53■□□□□ 0.4
DDX41-212ENST00000511040 SCN4AP35499 1836 aa17.53■□□□□ 0.4
DDX41-212ENST00000511040 TXNRD3Q86VQ6 643 aa17.52■□□□□ 0.4
DDX41-212ENST00000511040 SMC1BQ8NDV3 1235 aa17.52■□□□□ 0.4
DDX41-212ENST00000511040 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
DDX41-212ENST00000511040 SHTN1A0MZ66 631 aa17.51■□□□□ 0.39
DDX41-212ENST00000511040 LRRC24Q50LG9 513 aa17.51■□□□□ 0.39
DDX41-212ENST00000511040 SCN9AQ15858 1988 aa17.51■□□□□ 0.39
DDX41-212ENST00000511040 MED23Q9ULK4 1368 aa17.51■□□□□ 0.39
DDX41-212ENST00000511040 A0A1B0GUL6 1792 aa17.51■□□□□ 0.39
DDX41-212ENST00000511040 RLBP1P12271 317 aa17.5■□□□□ 0.39
DDX41-212ENST00000511040 FTSJ3Q8IY81 847 aaKnown RBP17.5■□□□□ 0.39
DDX41-212ENST00000511040 GPRC5DQ9NZD1 345 aa17.5■□□□□ 0.39
DDX41-212ENST00000511040 CLEC11AQ9Y240 323 aa17.5■□□□□ 0.39
DDX41-212ENST00000511040 GNAI3P08754 354 aa17.49■□□□□ 0.39
DDX41-212ENST00000511040 RFX5P48382 616 aaPredicted RBP17.49■□□□□ 0.39
DDX41-212ENST00000511040 FSTL1Q12841 308 aa17.49■□□□□ 0.39
DDX41-212ENST00000511040 DZIP1LQ8IYY4 767 aaKnown RBP17.49■□□□□ 0.39
DDX41-212ENST00000511040 FBXW7Q969H0 707 aa17.49■□□□□ 0.39
DDX41-212ENST00000511040 RIPOR2Q9Y4F9 1068 aa17.49■□□□□ 0.39
DDX41-212ENST00000511040 HSPA6P17066 643 aa17.48■□□□□ 0.39
DDX41-212ENST00000511040 CHADLQ6NUI6 762 aa17.48■□□□□ 0.39
DDX41-212ENST00000511040 LDHDQ86WU2 507 aa17.48■□□□□ 0.39
DDX41-212ENST00000511040 RCAN3Q9UKA8 241 aa17.48■□□□□ 0.39
DDX41-212ENST00000511040 METTL24Q5JXM2 366 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms