RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 PRAMEF18Q5VWM3 479 aa13.38□□□□□ -0.27
COPS4-207ENST00000509317 RASAL3Q86YV0 1011 aa13.38□□□□□ -0.27
COPS4-207ENST00000509317 SULF1Q8IWU6 871 aa13.38□□□□□ -0.27
COPS4-207ENST00000509317 TBC1D16Q8TBP0 767 aa13.38□□□□□ -0.27
COPS4-207ENST00000509317 LRRC37AA6NMS7 1700 aa13.38□□□□□ -0.27
COPS4-207ENST00000509317 NEUROD2Q15784 382 aa13.37□□□□□ -0.27
COPS4-207ENST00000509317 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
COPS4-207ENST00000509317 CTU1Q7Z7A3 348 aaKnown RBP13.37□□□□□ -0.27
COPS4-207ENST00000509317 JARID2Q92833 1246 aaPredicted RBP13.37□□□□□ -0.27
COPS4-207ENST00000509317 SEC31BQ9NQW1 1179 aa13.37□□□□□ -0.27
COPS4-207ENST00000509317 HPS5Q9UPZ3 1129 aa13.37□□□□□ -0.27
COPS4-207ENST00000509317 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
COPS4-207ENST00000509317 DDX60Q8IY21 1712 aaKnown RBP13.36□□□□□ -0.27
COPS4-207ENST00000509317 WTIPA6NIX2 430 aaPredicted RBP13.36□□□□□ -0.27
COPS4-207ENST00000509317 TBC1D8O95759 1140 aa13.36□□□□□ -0.27
COPS4-207ENST00000509317 RPS12P25398 132 aaKnown RBP13.36□□□□□ -0.27
COPS4-207ENST00000509317 MKRN3Q13064 507 aaKnown RBP13.36□□□□□ -0.27
COPS4-207ENST00000509317 SCARF1Q14162 830 aa13.36□□□□□ -0.27
COPS4-207ENST00000509317 SF3B3Q15393 1217 aaKnown RBP13.36□□□□□ -0.27
COPS4-207ENST00000509317 TMC4Q7Z404 712 aa13.36□□□□□ -0.27
COPS4-207ENST00000509317 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
COPS4-207ENST00000509317 CCDC85AQ96PX6 553 aaPredicted RBP13.36□□□□□ -0.27
COPS4-207ENST00000509317 ISCA1Q9BUE6 129 aa13.36□□□□□ -0.27
COPS4-207ENST00000509317 POLR2AP24928 1970 aaKnown RBP13.36□□□□□ -0.27
COPS4-207ENST00000509317 SCN9AQ15858 1988 aa13.35□□□□□ -0.27
COPS4-207ENST00000509317 UBE2Q2LH0YL09 131 aa13.35□□□□□ -0.27
COPS4-207ENST00000509317 IRS4O14654 1257 aaPredicted RBP13.35□□□□□ -0.27
COPS4-207ENST00000509317 UFL1O94874 794 aa13.35□□□□□ -0.27
COPS4-207ENST00000509317 VIL1P09327 827 aaKnown RBP13.35□□□□□ -0.27
COPS4-207ENST00000509317 TMPOP42166 694 aaKnown RBP13.35□□□□□ -0.27
COPS4-207ENST00000509317 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
COPS4-207ENST00000509317 PRPF38BQ5VTL8 546 aaKnown RBP13.34□□□□□ -0.27
COPS4-207ENST00000509317 ANKRD13DQ6ZTN6 518 aa13.34□□□□□ -0.27
COPS4-207ENST00000509317 PLBD2Q8NHP8 589 aa13.34□□□□□ -0.27
COPS4-207ENST00000509317 ZNF296Q8WUU4 475 aaPredicted RBP13.34□□□□□ -0.27
COPS4-207ENST00000509317 EYA3Q99504 573 aa13.34□□□□□ -0.27
COPS4-207ENST00000509317 MXD3Q9BW11 206 aa13.34□□□□□ -0.27
COPS4-207ENST00000509317 ZC3H12CQ9C0D7 883 aaKnown RBP13.34□□□□□ -0.27
COPS4-207ENST00000509317 MKI67P46013 3256 aaKnown RBP13.33□□□□□ -0.27
COPS4-207ENST00000509317 ZNF280AP59817 542 aaPredicted RBP13.33□□□□□ -0.28
COPS4-207ENST00000509317 HDGFL1Q5TGJ6 251 aa13.33□□□□□ -0.28
COPS4-207ENST00000509317 RSBN1LQ6PCB5 846 aaPredicted RBP13.33□□□□□ -0.28
COPS4-207ENST00000509317 ANKIB1Q9P2G1 1089 aa13.33□□□□□ -0.28
COPS4-207ENST00000509317 G3V3G9 751 aa13.32□□□□□ -0.28
COPS4-207ENST00000509317 CHL1O00533 1208 aa13.32□□□□□ -0.28
COPS4-207ENST00000509317 DCAF8Q5TAQ9 597 aa13.32□□□□□ -0.28
COPS4-207ENST00000509317 R3HDMLQ9H3Y0 253 aa13.32□□□□□ -0.28
COPS4-207ENST00000509317 HDAC9Q9UKV0 1011 aa13.32□□□□□ -0.28
COPS4-207ENST00000509317 HTTP42858 3142 aa13.32□□□□□ -0.28
COPS4-207ENST00000509317 NBPF9Q3BBW0 867 aa13.31□□□□□ -0.28
COPS4-207ENST00000509317 GMLQ99445 158 aa13.31□□□□□ -0.28
COPS4-207ENST00000509317 PNNQ9H307 717 aaKnown RBP13.31□□□□□ -0.28
COPS4-207ENST00000509317 MYOZ2Q9NPC6 264 aa13.31□□□□□ -0.28
COPS4-207ENST00000509317 BABAM1Q9NWV8 329 aa13.31□□□□□ -0.28
COPS4-207ENST00000509317 GGA1Q9UJY5 639 aa13.31□□□□□ -0.28
COPS4-207ENST00000509317 PRKG1Q13976 671 aa13.3□□□□□ -0.28
COPS4-207ENST00000509317 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
COPS4-207ENST00000509317 PODXL2Q9NZ53 605 aa13.3□□□□□ -0.28
COPS4-207ENST00000509317 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.3□□□□□ -0.28
COPS4-207ENST00000509317 FZD1Q9UP38 647 aa13.3□□□□□ -0.28
COPS4-207ENST00000509317 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
COPS4-207ENST00000509317 USP17L8P0C7I0 530 aa13.29□□□□□ -0.28
COPS4-207ENST00000509317 AGBL3Q8NEM8 1001 aa13.29□□□□□ -0.28
COPS4-207ENST00000509317 MYD88Q99836 296 aa13.29□□□□□ -0.28
COPS4-207ENST00000509317 PHAXQ9H814 394 aaKnown RBP13.29□□□□□ -0.28
COPS4-207ENST00000509317 CENPFP49454 3210 aa13.28□□□□□ -0.28
COPS4-207ENST00000509317 GPR25O00155 361 aa13.28□□□□□ -0.28
COPS4-207ENST00000509317 SASH1O94885 1247 aa13.28□□□□□ -0.28
COPS4-207ENST00000509317 LMOD3Q0VAK6 560 aa13.28□□□□□ -0.28
COPS4-207ENST00000509317 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
COPS4-207ENST00000509317 DUSP27Q5VZP5 1158 aa13.28□□□□□ -0.28
COPS4-207ENST00000509317 FBXW7Q969H0 707 aa13.28□□□□□ -0.28
COPS4-207ENST00000509317 DBF4Q9UBU7 674 aaPredicted RBP13.28□□□□□ -0.28
COPS4-207ENST00000509317 AKAP11Q9UKA4 1901 aa13.28□□□□□ -0.28
COPS4-207ENST00000509317 PAPPA2Q9BXP8 1791 aa13.27□□□□□ -0.28
COPS4-207ENST00000509317 USP17L3A6NCW0 530 aa13.27□□□□□ -0.29
COPS4-207ENST00000509317 USP17L4A6NCW7 530 aa13.27□□□□□ -0.29
COPS4-207ENST00000509317 ELL2O00472 640 aaPredicted RBP13.27□□□□□ -0.29
COPS4-207ENST00000509317 TRIM28Q13263 835 aaKnown RBP13.27□□□□□ -0.29
COPS4-207ENST00000509317 USP17L1Q7RTZ2 530 aa13.27□□□□□ -0.29
COPS4-207ENST00000509317 RIC3Q7Z5B4 369 aa13.27□□□□□ -0.29
COPS4-207ENST00000509317 ZBTB38Q8NAP3 1195 aaPredicted RBP13.27□□□□□ -0.29
COPS4-207ENST00000509317 BRCA2P51587 3418 aa13.27□□□□□ -0.29
COPS4-207ENST00000509317 FKBP1BP68106 108 aa13.26□□□□□ -0.29
COPS4-207ENST00000509317 PTPN12Q05209 780 aaKnown RBP13.26□□□□□ -0.29
COPS4-207ENST00000509317 HYPKQ9NX55 129 aa13.26□□□□□ -0.29
COPS4-207ENST00000509317 ZNF609O15014 1411 aa13.25□□□□□ -0.29
COPS4-207ENST00000509317 XDHP47989 1333 aa13.25□□□□□ -0.29
COPS4-207ENST00000509317 PITPNM2Q9BZ72 1349 aa13.25□□□□□ -0.29
COPS4-207ENST00000509317 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
COPS4-207ENST00000509317 TXNRD3Q86VQ6 643 aa13.25□□□□□ -0.29
COPS4-207ENST00000509317 REM2Q8IYK8 340 aaPredicted RBP13.25□□□□□ -0.29
COPS4-207ENST00000509317 MBIPQ9NS73 344 aa13.25□□□□□ -0.29
COPS4-207ENST00000509317 WNT10BO00744 389 aa13.24□□□□□ -0.29
COPS4-207ENST00000509317 KLRK1P26718 216 aa13.24□□□□□ -0.29
COPS4-207ENST00000509317 TM4SF4P48230 202 aa13.24□□□□□ -0.29
COPS4-207ENST00000509317 GOLGA2Q08379 1002 aa13.24□□□□□ -0.29
COPS4-207ENST00000509317 PKN2Q16513 984 aaKnown RBP13.24□□□□□ -0.29
COPS4-207ENST00000509317 DACT2Q5SW24 774 aa13.24□□□□□ -0.29
COPS4-207ENST00000509317 FBXO46Q6PJ61 603 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms