RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 EPHA10Q5JZY3 1008 aa18.53■□□□□ 0.56
DSP-203ENST00000506617 C20orf194Q5TEA3 1177 aa18.53■□□□□ 0.56
DSP-203ENST00000506617 LARGE2Q8N3Y3 721 aa18.53■□□□□ 0.56
DSP-203ENST00000506617 SUPT20HQ8NEM7 779 aa18.53■□□□□ 0.56
DSP-203ENST00000506617 SUCLG2Q96I99 432 aa18.53■□□□□ 0.56
DSP-203ENST00000506617 UBTFL1P0CB47 393 aaPredicted RBP18.52■□□□□ 0.56
DSP-203ENST00000506617 NSFL1CQ9UNZ2 370 aaKnown RBP18.52■□□□□ 0.56
DSP-203ENST00000506617 COG6Q9Y2V7 657 aa18.52■□□□□ 0.56
DSP-203ENST00000506617 CHMP3Q9Y3E7 222 aa18.52■□□□□ 0.56
DSP-203ENST00000506617 ZNF541Q9H0D2 1346 aa18.51■□□□□ 0.55
DSP-203ENST00000506617 KIF3CO14782 793 aa18.51■□□□□ 0.55
DSP-203ENST00000506617 RABL6Q3YEC7 729 aaPredicted RBP18.51■□□□□ 0.55
DSP-203ENST00000506617 LMBR1LQ6UX01 489 aa18.51■□□□□ 0.55
DSP-203ENST00000506617 JDP2Q8WYK2 163 aa18.51■□□□□ 0.55
DSP-203ENST00000506617 MEIS3Q99687 375 aa18.51■□□□□ 0.55
DSP-203ENST00000506617 ZBTB40Q9NUA8 1239 aa18.51■□□□□ 0.55
DSP-203ENST00000506617 GNAI2P04899 355 aa18.5■□□□□ 0.55
DSP-203ENST00000506617 IGHMBP2P38935 993 aaKnown RBP18.5■□□□□ 0.55
DSP-203ENST00000506617 DPY19L2Q6NUT2 758 aa18.5■□□□□ 0.55
DSP-203ENST00000506617 KAZALD1Q96I82 304 aa18.5■□□□□ 0.55
DSP-203ENST00000506617 ANKRD18BA2A2Z9 1011 aa18.49■□□□□ 0.55
DSP-203ENST00000506617 FZD9O00144 591 aa18.49■□□□□ 0.55
DSP-203ENST00000506617 DDNO94850 711 aaPredicted RBP18.49■□□□□ 0.55
DSP-203ENST00000506617 KIAA2012Q0VF49 1180 aa18.49■□□□□ 0.55
DSP-203ENST00000506617 NIM1KQ8IY84 436 aa18.49■□□□□ 0.55
DSP-203ENST00000506617 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
DSP-203ENST00000506617 BSDC1Q9NW68 430 aaPredicted RBP18.49■□□□□ 0.55
DSP-203ENST00000506617 PODXL2Q9NZ53 605 aa18.49■□□□□ 0.55
DSP-203ENST00000506617 POLLQ9UGP5 575 aa18.49■□□□□ 0.55
DSP-203ENST00000506617 C6orf229H3BNL8 230 aa18.48■□□□□ 0.55
DSP-203ENST00000506617 IFIT5Q13325 482 aaKnown RBP18.48■□□□□ 0.55
DSP-203ENST00000506617 MTX1Q13505 466 aa18.48■□□□□ 0.55
DSP-203ENST00000506617 TBC1D16Q8TBP0 767 aa18.48■□□□□ 0.55
DSP-203ENST00000506617 GPR101Q96P66 508 aaPredicted RBP18.48■□□□□ 0.55
DSP-203ENST00000506617 BICC1Q9H694 974 aaKnown RBP18.48■□□□□ 0.55
DSP-203ENST00000506617 RRAGCQ9HB90 399 aa18.48■□□□□ 0.55
DSP-203ENST00000506617 ANKIB1Q9P2G1 1089 aa18.48■□□□□ 0.55
DSP-203ENST00000506617 XDHP47989 1333 aa18.48■□□□□ 0.55
DSP-203ENST00000506617 SCN4AP35499 1836 aa18.47■□□□□ 0.55
DSP-203ENST00000506617 UFL1O94874 794 aa18.47■□□□□ 0.55
DSP-203ENST00000506617 MINPP1Q9UNW1 487 aa18.47■□□□□ 0.55
DSP-203ENST00000506617 EIF6P56537 245 aaKnown RBP18.46■□□□□ 0.55
DSP-203ENST00000506617 WASHC4Q2M389 1173 aa18.46■□□□□ 0.55
DSP-203ENST00000506617 ANKRD44Q8N8A2 993 aa18.46■□□□□ 0.55
DSP-203ENST00000506617 MPHOSPH8Q99549 860 aa18.46■□□□□ 0.55
DSP-203ENST00000506617 GGA1Q9UJY5 639 aa18.46■□□□□ 0.55
DSP-203ENST00000506617 SCN9AQ15858 1988 aa18.45■□□□□ 0.54
DSP-203ENST00000506617 POTECB2RU33 542 aa18.45■□□□□ 0.54
DSP-203ENST00000506617 RIMBP2O15034 1052 aa18.45■□□□□ 0.54
DSP-203ENST00000506617 CCDC57Q2TAC2 916 aa18.45■□□□□ 0.54
DSP-203ENST00000506617 ZNF594Q96JF6 807 aaPredicted RBP18.45■□□□□ 0.54
DSP-203ENST00000506617 EYA3Q99504 573 aa18.45■□□□□ 0.54
DSP-203ENST00000506617 LRRFIP2Q9Y608 721 aaKnown RBP18.45■□□□□ 0.54
DSP-203ENST00000506617 TAF7LQ5H9L4 462 aa18.44■□□□□ 0.54
DSP-203ENST00000506617 RPAP2Q8IXW5 612 aaPredicted RBP18.44■□□□□ 0.54
DSP-203ENST00000506617 CRBNQ96SW2 442 aa18.44■□□□□ 0.54
DSP-203ENST00000506617 ZNRF3Q9ULT6 936 aa18.44■□□□□ 0.54
DSP-203ENST00000506617 PSME4Q14997 1843 aa18.44■□□□□ 0.54
DSP-203ENST00000506617 VEGFAP15692 232 aaPredicted RBP18.43■□□□□ 0.54
DSP-203ENST00000506617 ATP2B4P23634 1241 aa18.43■□□□□ 0.54
DSP-203ENST00000506617 C1QTNF8P60827 252 aa18.43■□□□□ 0.54
DSP-203ENST00000506617 GPC2Q8N158 579 aa18.43■□□□□ 0.54
DSP-203ENST00000506617 L3MBTL3Q96JM7 780 aaPredicted RBP18.43■□□□□ 0.54
DSP-203ENST00000506617 DBNDD1Q9H9R9 158 aa18.43■□□□□ 0.54
DSP-203ENST00000506617 GJA3Q9Y6H8 435 aa18.43■□□□□ 0.54
DSP-203ENST00000506617 WTIPA6NIX2 430 aaPredicted RBP18.42■□□□□ 0.54
DSP-203ENST00000506617 YDJCA8MPS7 323 aa18.42■□□□□ 0.54
DSP-203ENST00000506617 CHRNDQ07001 517 aa18.42■□□□□ 0.54
DSP-203ENST00000506617 C16orf71Q8IYS4 520 aaPredicted RBP18.42■□□□□ 0.54
DSP-203ENST00000506617 ZC3H12CQ9C0D7 883 aaKnown RBP18.42■□□□□ 0.54
DSP-203ENST00000506617 ATP8B2P98198 1209 aa18.41■□□□□ 0.54
DSP-203ENST00000506617 DOK7Q18PE1 504 aa18.41■□□□□ 0.54
DSP-203ENST00000506617 ANKRD2Q9GZV1 360 aa18.41■□□□□ 0.54
DSP-203ENST00000506617 FBXO3Q9UK99 471 aa18.41■□□□□ 0.54
DSP-203ENST00000506617 MED23Q9ULK4 1368 aa18.41■□□□□ 0.54
DSP-203ENST00000506617 ECE2O60344 883 aa18.4■□□□□ 0.54
DSP-203ENST00000506617 TOMM70O94826 608 aa18.4■□□□□ 0.54
DSP-203ENST00000506617 CXCL9Q07325 125 aa18.4■□□□□ 0.54
DSP-203ENST00000506617 ERICH6BQ5W0A0 696 aa18.4■□□□□ 0.54
DSP-203ENST00000506617 LDHAL6AQ6ZMR3 332 aa18.4■□□□□ 0.54
DSP-203ENST00000506617 CNNM1Q9NRU3 951 aa18.4■□□□□ 0.54
DSP-203ENST00000506617 IQCA1LA6NCM1 817 aa18.39■□□□□ 0.53
DSP-203ENST00000506617 RAD17O75943 681 aa18.39■□□□□ 0.53
DSP-203ENST00000506617 CIAPIN1Q6FI81 312 aa18.39■□□□□ 0.53
DSP-203ENST00000506617 CEP85Q6P2H3 762 aa18.39■□□□□ 0.53
DSP-203ENST00000506617 HELBQ8NG08 1087 aaPredicted RBP18.39■□□□□ 0.53
DSP-203ENST00000506617 SSH3Q8TE77 659 aa18.39■□□□□ 0.53
DSP-203ENST00000506617 PUS3Q9BZE2 481 aaKnown RBP18.39■□□□□ 0.53
DSP-203ENST00000506617 LEMD3Q9Y2U8 911 aa18.39■□□□□ 0.53
DSP-203ENST00000506617 ZNF804BA4D1E1 1349 aa18.39■□□□□ 0.53
DSP-203ENST00000506617 ZNF646O15015 1829 aaPredicted RBP18.39■□□□□ 0.53
DSP-203ENST00000506617 TAF5LO75529 589 aa18.38■□□□□ 0.53
DSP-203ENST00000506617 NEFLP07196 543 aa18.38■□□□□ 0.53
DSP-203ENST00000506617 POLA2Q14181 598 aa18.38■□□□□ 0.53
DSP-203ENST00000506617 KLHDC4Q8TBB5 520 aa18.38■□□□□ 0.53
DSP-203ENST00000506617 RBM46Q8TBY0 533 aaKnown RBP18.38■□□□□ 0.53
DSP-203ENST00000506617 COPRSQ9NQ92 184 aa18.38■□□□□ 0.53
DSP-203ENST00000506617 HACL1Q9UJ83 578 aa18.38■□□□□ 0.53
DSP-203ENST00000506617 ADAMTSL1Q8N6G6 1762 aa18.37■□□□□ 0.53
DSP-203ENST00000506617 G3V3G9 751 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms