RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TMC4Q7Z404 712 aa21.44■■□□□ 1.02
PDLIM7-215ENST00000506161 TTLL11Q8NHH1 800 aa21.44■■□□□ 1.02
PDLIM7-215ENST00000506161 DNAAF4Q8WXU2 420 aa21.44■■□□□ 1.02
PDLIM7-215ENST00000506161 VPS33BQ9H267 617 aa21.44■■□□□ 1.02
PDLIM7-215ENST00000506161 DBNDD1Q9H9R9 158 aa21.44■■□□□ 1.02
PDLIM7-215ENST00000506161 GCKRQ14397 625 aa21.43■■□□□ 1.02
PDLIM7-215ENST00000506161 TBC1D16Q8TBP0 767 aa21.43■■□□□ 1.02
PDLIM7-215ENST00000506161 TMX4Q9H1E5 349 aaPredicted RBP21.43■■□□□ 1.02
PDLIM7-215ENST00000506161 GREM2Q9H772 168 aa21.43■■□□□ 1.02
PDLIM7-215ENST00000506161 PCDH10Q9P2E7 1040 aa21.43■■□□□ 1.02
PDLIM7-215ENST00000506161 POLR2AP24928 1970 aaKnown RBP21.43■■□□□ 1.02
PDLIM7-215ENST00000506161 HSPA8P11142 646 aaKnown RBP21.42■■□□□ 1.02
PDLIM7-215ENST00000506161 GMPSP49915 693 aaPredicted RBP21.42■■□□□ 1.02
PDLIM7-215ENST00000506161 CCDC152Q4G0S7 254 aa21.42■■□□□ 1.02
PDLIM7-215ENST00000506161 RTL9Q8NET4 1388 aa21.42■■□□□ 1.02
PDLIM7-215ENST00000506161 CHMP4AQ9BY43 222 aa21.42■■□□□ 1.02
PDLIM7-215ENST00000506161 NEXNQ0ZGT2 675 aa21.41■■□□□ 1.02
PDLIM7-215ENST00000506161 DOK7Q18PE1 504 aa21.41■■□□□ 1.02
PDLIM7-215ENST00000506161 CIAPIN1Q6FI81 312 aa21.41■■□□□ 1.02
PDLIM7-215ENST00000506161 MYH16Q9H6N6 1097 aa21.41■■□□□ 1.02
PDLIM7-215ENST00000506161 GPRC5DQ9NZD1 345 aa21.41■■□□□ 1.02
PDLIM7-215ENST00000506161 CLEC11AQ9Y240 323 aa21.41■■□□□ 1.02
PDLIM7-215ENST00000506161 C6orf229H3BNL8 230 aa21.4■■□□□ 1.02
PDLIM7-215ENST00000506161 WASHC4Q2M389 1173 aa21.4■■□□□ 1.02
PDLIM7-215ENST00000506161 BEND3Q5T5X7 828 aa21.4■■□□□ 1.02
PDLIM7-215ENST00000506161 CDCA7LQ96GN5 454 aa21.4■■□□□ 1.02
PDLIM7-215ENST00000506161 PODXL2Q9NZ53 605 aa21.4■■□□□ 1.02
PDLIM7-215ENST00000506161 ZBTB12Q9Y330 459 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-215ENST00000506161 HIRAP54198 1017 aaPredicted RBP21.39■■□□□ 1.01
PDLIM7-215ENST00000506161 MAP2K1Q02750 393 aaPredicted RBP21.39■■□□□ 1.01
PDLIM7-215ENST00000506161 MLLT1Q03111 559 aaPredicted RBP21.39■■□□□ 1.01
PDLIM7-215ENST00000506161 LINS1Q8NG48 757 aa21.39■■□□□ 1.01
PDLIM7-215ENST00000506161 RASSF10A6NK89 507 aa21.38■■□□□ 1.01
PDLIM7-215ENST00000506161 PSMD14O00487 310 aa21.38■■□□□ 1.01
PDLIM7-215ENST00000506161 ECE2O60344 883 aa21.38■■□□□ 1.01
PDLIM7-215ENST00000506161 DEFB115Q30KQ5 88 aa21.38■■□□□ 1.01
PDLIM7-215ENST00000506161 CNTROBQ8N137 903 aa21.38■■□□□ 1.01
PDLIM7-215ENST00000506161 TRPM4Q8TD43 1214 aa21.38■■□□□ 1.01
PDLIM7-215ENST00000506161 PLA2G12BQ9BX93 195 aa21.38■■□□□ 1.01
PDLIM7-215ENST00000506161 UFL1O94874 794 aa21.37■■□□□ 1.01
PDLIM7-215ENST00000506161 LMOD1P29536 600 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-215ENST00000506161 EPHA10Q5JZY3 1008 aa21.37■■□□□ 1.01
PDLIM7-215ENST00000506161 PNMA8AQ86V59 439 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-215ENST00000506161 ANKRD18AQ8IVF6 992 aa21.37■■□□□ 1.01
PDLIM7-215ENST00000506161 TRAF5O00463 557 aa21.36■■□□□ 1.01
PDLIM7-215ENST00000506161 EGFRP00533 1210 aa21.36■■□□□ 1.01
PDLIM7-215ENST00000506161 WDR33Q9C0J8 1336 aaKnown RBP21.35■■□□□ 1.01
PDLIM7-215ENST00000506161 CSF1RP07333 972 aa21.35■■□□□ 1.01
PDLIM7-215ENST00000506161 FOXO4P98177 505 aa21.35■■□□□ 1.01
PDLIM7-215ENST00000506161 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
PDLIM7-215ENST00000506161 ANKIB1Q9P2G1 1089 aa21.35■■□□□ 1.01
PDLIM7-215ENST00000506161 MINPP1Q9UNW1 487 aa21.35■■□□□ 1.01
PDLIM7-215ENST00000506161 CCDC85CA6NKD9 419 aa21.34■■□□□ 1.01
PDLIM7-215ENST00000506161 HSP90B1P14625 803 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-215ENST00000506161 DLK2Q6UY11 383 aa21.34■■□□□ 1.01
PDLIM7-215ENST00000506161 USP50Q70EL3 339 aaPredicted RBP21.34■■□□□ 1.01
PDLIM7-215ENST00000506161 MRPL50Q8N5N7 158 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-215ENST00000506161 ADARB2Q9NS39 739 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-215ENST00000506161 GGA1Q9UJY5 639 aa21.34■■□□□ 1.01
PDLIM7-215ENST00000506161 XDHP47989 1333 aa21.33■■□□□ 1.01
PDLIM7-215ENST00000506161 ITGA6P23229 1130 aa21.33■■□□□ 1.01
PDLIM7-215ENST00000506161 KLRK1P26718 216 aa21.33■■□□□ 1.01
PDLIM7-215ENST00000506161 TXNRD3Q86VQ6 643 aa21.33■■□□□ 1.01
PDLIM7-215ENST00000506161 CNOT7Q9UIV1 285 aaKnown RBP21.33■■□□□ 1.01
PDLIM7-215ENST00000506161 ABT1Q9ULW3 272 aaKnown RBP21.33■■□□□ 1.01
PDLIM7-215ENST00000506161 RGS19P49795 217 aa21.32■■□□□ 1
PDLIM7-215ENST00000506161 TNIP1Q15025 636 aa21.32■■□□□ 1
PDLIM7-215ENST00000506161 MICALL2Q8IY33 904 aa21.32■■□□□ 1
PDLIM7-215ENST00000506161 CDC5LQ99459 802 aaKnown RBP21.32■■□□□ 1
PDLIM7-215ENST00000506161 EYA3Q99504 573 aa21.32■■□□□ 1
PDLIM7-215ENST00000506161 BCL2L13Q9BXK5 485 aa21.32■■□□□ 1
PDLIM7-215ENST00000506161 BSDC1Q9NW68 430 aaPredicted RBP21.32■■□□□ 1
PDLIM7-215ENST00000506161 SNAP23O00161 211 aa21.31■■□□□ 1
PDLIM7-215ENST00000506161 SAMD7Q7Z3H4 446 aa21.31■■□□□ 1
PDLIM7-215ENST00000506161 SSH1Q8WYL5 1049 aa21.31■■□□□ 1
PDLIM7-215ENST00000506161 TRMT2AQ8IZ69 625 aaKnown RBP21.3■■□□□ 1
PDLIM7-215ENST00000506161 KAZALD1Q96I82 304 aa21.3■■□□□ 1
PDLIM7-215ENST00000506161 BEGAINQ9BUH8 593 aa21.3■■□□□ 1
PDLIM7-215ENST00000506161 GLIS2Q9BZE0 524 aaPredicted RBP21.3■■□□□ 1
PDLIM7-215ENST00000506161 ZC3H12CQ9C0D7 883 aaKnown RBP21.3■■□□□ 1
PDLIM7-215ENST00000506161 E9PSI1 815 aa21.29■■□□□ 1
PDLIM7-215ENST00000506161 CCER2I3L3R5 266 aa21.29■■□□□ 1
PDLIM7-215ENST00000506161 CST9Q5W186 159 aa21.29■■□□□ 1
PDLIM7-215ENST00000506161 SLC4A10Q6U841 1118 aa21.29■■□□□ 1
PDLIM7-215ENST00000506161 PGAP2Q9UHJ9 254 aa21.29■■□□□ 1
PDLIM7-215ENST00000506161 ASTN2O75129 1339 aaPredicted RBP21.29■■□□□ 1
PDLIM7-215ENST00000506161 GRM8O00222 908 aa21.28■■□□□ 1
PDLIM7-215ENST00000506161 VIL1P09327 827 aaKnown RBP21.28■■□□□ 1
PDLIM7-215ENST00000506161 ATP2B4P23634 1241 aa21.28■■□□□ 1
PDLIM7-215ENST00000506161 CCT4P50991 539 aaKnown RBP21.28■■□□□ 1
PDLIM7-215ENST00000506161 TBC1D10BQ4KMP7 808 aaPredicted RBP21.28■■□□□ 1
PDLIM7-215ENST00000506161 ZNF594Q96JF6 807 aaPredicted RBP21.28■■□□□ 1
PDLIM7-215ENST00000506161 MXD3Q9BW11 206 aa21.28■■□□□ 1
PDLIM7-215ENST00000506161 IRS2Q9Y4H2 1338 aa21.28■■□□□ 1
PDLIM7-215ENST00000506161 MED23Q9ULK4 1368 aa21.27■■□□□ 1
PDLIM7-215ENST00000506161 THSD7BQ9C0I4 1608 aa21.27■■□□□ 1
PDLIM7-215ENST00000506161 DPF2Q92785 391 aa21.27■■□□□ 1
PDLIM7-215ENST00000506161 SUCLG2Q96I99 432 aa21.27■■□□□ 1
PDLIM7-215ENST00000506161 NBPF7P0C2Y1 421 aaPredicted RBP21.26■□□□□ 0.99
PDLIM7-215ENST00000506161 LMBR1LQ6UX01 489 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms