RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 NBPF6Q5VWK0 638 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 NBPF5PQ86XG9 351 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-205ENST00000506154 NBPF4Q96M43 638 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 PSMD1Q99460 953 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 FBXO24O75426 580 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 AMHR2Q16671 573 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 NAALADL2Q58DX5 795 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 ARSIQ5FYB1 569 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 VTI1BQ9UEU0 232 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 DOCK2Q92608 1830 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 CTIFO43310 598 aaKnown RBP2.8□□□□□ -1.96
NEDD4-205ENST00000506154 IRS1P35568 1242 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 GABPB1Q06547 395 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-205ENST00000506154 RPAINQ86UA6 219 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 PRKRIP1Q9H875 184 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-205ENST00000506154 LOC285556D6RIA3 1793 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 SEPT6Q14141 434 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 GPATCH11Q8N954 259 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 AKT1S1Q96B36 256 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 HIC1Q14526 733 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 CDC37Q16543 378 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-205ENST00000506154 UBR7Q8N806 425 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 VPS37AQ8NEZ2 397 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 DMGDHQ9UI17 866 aaKnown RBP2.8□□□□□ -1.96
NEDD4-205ENST00000506154 FAM174AQ8TBP5 190 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 FAM210AQ96ND0 272 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 BRMS1Q9HCU9 246 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 GPHNQ9NQX3 736 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-205ENST00000506154 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.8□□□□□ -1.967e-8■■■■■ 186.3
NEDD4-205ENST00000506154 NUB1Q9Y5A7 615 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 C21orf2O43822 256 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 KIF1CO43896 1103 aaKnown RBP2.8□□□□□ -1.96
NEDD4-205ENST00000506154 MUM1L1Q5H9M0 696 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 POGKQ9P215 609 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 PAXBP1Q9Y5B6 917 aa2.8□□□□□ -1.96
NEDD4-205ENST00000506154 ATN1P54259 1190 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 SH3D19Q5HYK7 790 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 MRPL42Q9Y6G3 142 aaKnown RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 ADAMTSL1Q8N6G6 1762 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L3A6NCW0 530 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L4A6NCW7 530 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 FUT2Q10981 343 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 DPYDQ12882 1025 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 SYCP1Q15431 976 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L2Q6R6M4 530 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L1Q7RTZ2 530 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 CHIC2Q9UKJ5 165 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 NOB1Q9ULX3 412 aaKnown RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 AFDNP55196 1824 aaKnown RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 RAB11FIP3O75154 756 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 COPS2P61201 443 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 PDIA6Q15084 440 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 CCDC184Q52MB2 194 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 DDX46Q7L014 1031 aaKnown RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 EXOC8Q8IYI6 725 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 NDUFB9Q9Y6M9 179 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 CCDC172P0C7W6 258 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 HSP90AB4PQ58FF6 505 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 L1TD1Q5T7N2 865 aaKnown RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 RAVER1Q8IY67 606 aaKnown RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 NEUROD4Q9HD90 331 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 PCDHGA4Q9Y5G9 962 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 BTAF1O14981 1849 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 LOC102724159A0A0B4J2E5 919 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 FRAT2O75474 233 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 PDIA5Q14554 519 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 MFSD10Q14728 455 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 PWP2Q15269 919 aaKnown RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 C8orf34Q49A92 452 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 DPH6Q7L8W6 267 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 TSPYL1Q9H0U9 437 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 PCDHGC3Q9UN70 934 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 RCCD1A6NED2 376 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 TMEM88BA6NKF7 163 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 WASLO00401 505 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 RINLQ6ZS11 566 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 KIAA1211Q6ZU35 1233 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 KANSL2Q9H9L4 492 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 BMP2KQ9NSY1 1161 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 CEP126Q9P2H0 1117 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 NOL7Q9UMY1 257 aaKnown RBP2.79□□□□□ -1.96
NEDD4-205ENST00000506154 KIAA1024Q9UPX6 916 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 BOLA1Q9Y3E2 137 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 TTC21AQ8NDW8 1320 aa2.79□□□□□ -1.96
NEDD4-205ENST00000506154 ANKRD31Q8N7Z5 1873 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 KIF3CO14782 793 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 TIAM2Q8IVF5 1701 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 LAS1LQ9Y4W2 734 aaKnown RBP2.78□□□□□ -1.96
NEDD4-205ENST00000506154 MAFBQ9Y5Q3 323 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-205ENST00000506154 ANKRD18BA2A2Z9 1011 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L15C9J2P7 530 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L10C9JJH3 530 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L13C9JLJ4 530 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L12C9JPN9 530 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L11C9JVI0 530 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L21D6R901 530 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L18D6R9N7 530 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L22D6RA61 530 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L17D6RBQ6 530 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L19D6RCP7 530 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms