RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
DDX41-204ENST00000504807 CXCL9Q07325 125 aa16.99■□□□□ 0.31
DDX41-204ENST00000504807 SF3B3Q15393 1217 aaKnown RBP16.99■□□□□ 0.31
DDX41-204ENST00000504807 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
DDX41-204ENST00000504807 SALL2Q9Y467 1007 aaPredicted RBP16.99■□□□□ 0.31
DDX41-204ENST00000504807 IRS4O14654 1257 aaPredicted RBP16.98■□□□□ 0.31
DDX41-204ENST00000504807 BBOX1O75936 387 aa16.98■□□□□ 0.31
DDX41-204ENST00000504807 IGKV5-2P06315 115 aa16.98■□□□□ 0.31
DDX41-204ENST00000504807 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
DDX41-204ENST00000504807 CSRNP1Q96S65 589 aa16.98■□□□□ 0.31
DDX41-204ENST00000504807 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
DDX41-204ENST00000504807 SEC31BQ9NQW1 1179 aa16.98■□□□□ 0.31
DDX41-204ENST00000504807 HDAC9Q9UKV0 1011 aa16.98■□□□□ 0.31
DDX41-204ENST00000504807 SHTN1A0MZ66 631 aa16.97■□□□□ 0.31
DDX41-204ENST00000504807 YDJCA8MPS7 323 aa16.97■□□□□ 0.31
DDX41-204ENST00000504807 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
DDX41-204ENST00000504807 PKN2Q16513 984 aaKnown RBP16.97■□□□□ 0.31
DDX41-204ENST00000504807 DPP8Q6V1X1 898 aaPredicted RBP16.97■□□□□ 0.31
DDX41-204ENST00000504807 MPNDQ8N594 471 aa16.97■□□□□ 0.31
DDX41-204ENST00000504807 GBA2Q9HCG7 927 aaPredicted RBP16.97■□□□□ 0.31
DDX41-204ENST00000504807 FANCIQ9NVI1 1328 aa16.96■□□□□ 0.31
DDX41-204ENST00000504807 GPSM2P81274 684 aa16.96■□□□□ 0.31
DDX41-204ENST00000504807 KIAA2012Q0VF49 1180 aa16.96■□□□□ 0.31
DDX41-204ENST00000504807 C2orf69Q8N8R5 385 aa16.96■□□□□ 0.31
DDX41-204ENST00000504807 ZBTB38Q8NAP3 1195 aaPredicted RBP16.96■□□□□ 0.31
DDX41-204ENST00000504807 METTL22Q9BUU2 404 aaPredicted RBP16.96■□□□□ 0.31
DDX41-204ENST00000504807 ZNRF3Q9ULT6 936 aa16.96■□□□□ 0.31
DDX41-204ENST00000504807 MAP3K2Q9Y2U5 619 aa16.96■□□□□ 0.31
DDX41-204ENST00000504807 MKI67P46013 3256 aaKnown RBP16.96■□□□□ 0.31
DDX41-204ENST00000504807 PI4KAP2A4QPH2 592 aa16.95■□□□□ 0.3
DDX41-204ENST00000504807 DLL1O00548 723 aa16.95■□□□□ 0.3
DDX41-204ENST00000504807 ANP32CO43423 234 aa16.95■□□□□ 0.3
DDX41-204ENST00000504807 RAD17O75943 681 aa16.95■□□□□ 0.3
DDX41-204ENST00000504807 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
DDX41-204ENST00000504807 GRIPAP1Q4V328 841 aa16.95■□□□□ 0.3
DDX41-204ENST00000504807 CCDC30Q5VVM6 783 aa16.95■□□□□ 0.3
DDX41-204ENST00000504807 PI4KAP1Q8N8J0 262 aa16.95■□□□□ 0.3
DDX41-204ENST00000504807 CCDC85AQ96PX6 553 aaPredicted RBP16.95■□□□□ 0.3
DDX41-204ENST00000504807 POLLQ9UGP5 575 aa16.95■□□□□ 0.3
DDX41-204ENST00000504807 WTIPA6NIX2 430 aaPredicted RBP16.94■□□□□ 0.3
DDX41-204ENST00000504807 PCCAP05165 728 aaPredicted RBP16.94■□□□□ 0.3
DDX41-204ENST00000504807 SLC10A3P09131 477 aa16.94■□□□□ 0.3
DDX41-204ENST00000504807 CWF19L2Q2TBE0 894 aaKnown RBP16.94■□□□□ 0.3
DDX41-204ENST00000504807 ZNF296Q8WUU4 475 aaPredicted RBP16.94■□□□□ 0.3
DDX41-204ENST00000504807 KCNQ5Q9NR82 932 aa16.94■□□□□ 0.3
DDX41-204ENST00000504807 CNOT7Q9UIV1 285 aaKnown RBP16.94■□□□□ 0.3
DDX41-204ENST00000504807 IL16Q14005 1332 aa16.94■□□□□ 0.3
DDX41-204ENST00000504807 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
DDX41-204ENST00000504807 CCDC191Q8NCU4 936 aa16.93■□□□□ 0.3
DDX41-204ENST00000504807 ADM5C9JUS6 153 aa16.92■□□□□ 0.3
DDX41-204ENST00000504807 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
DDX41-204ENST00000504807 CWC25Q9NXE8 425 aaPredicted RBP16.92■□□□□ 0.3
DDX41-204ENST00000504807 CDHR2Q9BYE9 1310 aa16.92■□□□□ 0.3
DDX41-204ENST00000504807 H7C1D1 291 aa16.91■□□□□ 0.3
DDX41-204ENST00000504807 VAMP4O75379 141 aa16.91■□□□□ 0.3
DDX41-204ENST00000504807 TBC1D8O95759 1140 aa16.91■□□□□ 0.3
DDX41-204ENST00000504807 EXOSC9Q06265 439 aaKnown RBP16.91■□□□□ 0.3
DDX41-204ENST00000504807 MICALL2Q8IY33 904 aa16.91■□□□□ 0.3
DDX41-204ENST00000504807 SUPT20HQ8NEM7 779 aa16.91■□□□□ 0.3
DDX41-204ENST00000504807 VPS33BQ9H267 617 aa16.91■□□□□ 0.3
DDX41-204ENST00000504807 DBNDD1Q9H9R9 158 aa16.91■□□□□ 0.3
DDX41-204ENST00000504807 NSFL1CQ9UNZ2 370 aaKnown RBP16.91■□□□□ 0.3
DDX41-204ENST00000504807 RTL9Q8NET4 1388 aa16.9■□□□□ 0.3
DDX41-204ENST00000504807 SZT2Q5T011 3432 aa16.9■□□□□ 0.3
DDX41-204ENST00000504807 RIMBP2O15034 1052 aa16.9■□□□□ 0.3
DDX41-204ENST00000504807 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
DDX41-204ENST00000504807 RPS8P62241 208 aaKnown RBP16.9■□□□□ 0.3
DDX41-204ENST00000504807 TNIP1Q15025 636 aa16.9■□□□□ 0.3
DDX41-204ENST00000504807 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
DDX41-204ENST00000504807 FBXO46Q6PJ61 603 aaPredicted RBP16.9■□□□□ 0.3
DDX41-204ENST00000504807 SAMD7Q7Z3H4 446 aa16.9■□□□□ 0.3
DDX41-204ENST00000504807 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
DDX41-204ENST00000504807 TBC1D16Q8TBP0 767 aa16.9■□□□□ 0.3
DDX41-204ENST00000504807 TMX4Q9H1E5 349 aaPredicted RBP16.9■□□□□ 0.3
DDX41-204ENST00000504807 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
DDX41-204ENST00000504807 NEURL1BA8MQ27 555 aa16.89■□□□□ 0.29
DDX41-204ENST00000504807 EGFRP00533 1210 aa16.89■□□□□ 0.29
DDX41-204ENST00000504807 DOK7Q18PE1 504 aa16.89■□□□□ 0.29
DDX41-204ENST00000504807 TBC1D10BQ4KMP7 808 aaPredicted RBP16.89■□□□□ 0.29
DDX41-204ENST00000504807 SCN9AQ15858 1988 aa16.89■□□□□ 0.29
DDX41-204ENST00000504807 PDE8AO60658 829 aa16.88■□□□□ 0.29
DDX41-204ENST00000504807 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
DDX41-204ENST00000504807 CASP7P55210 303 aa16.88■□□□□ 0.29
DDX41-204ENST00000504807 FLIIQ13045 1269 aa16.88■□□□□ 0.29
DDX41-204ENST00000504807 WASHC4Q2M389 1173 aa16.88■□□□□ 0.29
DDX41-204ENST00000504807 TMC4Q7Z404 712 aa16.88■□□□□ 0.29
DDX41-204ENST00000504807 RASAL3Q86YV0 1011 aa16.88■□□□□ 0.29
DDX41-204ENST00000504807 SPEF2Q9C093 1822 aa16.87■□□□□ 0.29
DDX41-204ENST00000504807 POTEFA5A3E0 1075 aa16.87■□□□□ 0.29
DDX41-204ENST00000504807 C6orf229H3BNL8 230 aa16.87■□□□□ 0.29
DDX41-204ENST00000504807 PSMD14O00487 310 aa16.87■□□□□ 0.29
DDX41-204ENST00000504807 CTSWP56202 376 aa16.87■□□□□ 0.29
DDX41-204ENST00000504807 WDR63Q8IWG1 891 aa16.87■□□□□ 0.29
DDX41-204ENST00000504807 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
DDX41-204ENST00000504807 TTLL11Q8NHH1 800 aa16.87■□□□□ 0.29
DDX41-204ENST00000504807 DCPSQ96C86 337 aaKnown RBP16.87■□□□□ 0.29
DDX41-204ENST00000504807 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
DDX41-204ENST00000504807 GREM2Q9H772 168 aa16.87■□□□□ 0.29
DDX41-204ENST00000504807 COLQQ9Y215 455 aaPredicted RBP16.87■□□□□ 0.29
DDX41-204ENST00000504807 AKAP11Q9UKA4 1901 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms