RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 MVPQ14764 893 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-208ENST00000504489 C20orf194Q5TEA3 1177 aa14.93□□□□□ -0.02
PDLIM5-208ENST00000504489 SOGA3Q5TF21 947 aa14.93□□□□□ -0.02
PDLIM5-208ENST00000504489 CC2D2BQ6DHV5 1058 aa14.93□□□□□ -0.02
PDLIM5-208ENST00000504489 ANKRD44Q8N8A2 993 aa14.93□□□□□ -0.02
PDLIM5-208ENST00000504489 CELF1Q92879 486 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-208ENST00000504489 CDC5LQ99459 802 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-208ENST00000504489 ITGA6P23229 1130 aa14.92□□□□□ -0.02
PDLIM5-208ENST00000504489 IFIT5Q13325 482 aaKnown RBP14.92□□□□□ -0.02
PDLIM5-208ENST00000504489 FAM161AQ3B820 660 aa14.92□□□□□ -0.02
PDLIM5-208ENST00000504489 GRIPAP1Q4V328 841 aa14.92□□□□□ -0.02
PDLIM5-208ENST00000504489 SP8Q8IXZ3 490 aa14.92□□□□□ -0.02
PDLIM5-208ENST00000504489 DDX19BQ9UMR2 479 aa14.92□□□□□ -0.02
PDLIM5-208ENST00000504489 ATP6V0A2Q9Y487 856 aa14.92□□□□□ -0.02
PDLIM5-208ENST00000504489 LRRFIP2Q9Y608 721 aaKnown RBP14.92□□□□□ -0.02
PDLIM5-208ENST00000504489 ANKRD18BA2A2Z9 1011 aa14.91□□□□□ -0.02
PDLIM5-208ENST00000504489 GNAI2P04899 355 aa14.91□□□□□ -0.02
PDLIM5-208ENST00000504489 ANKRD18AQ8IVF6 992 aa14.91□□□□□ -0.02
PDLIM5-208ENST00000504489 CHMP4BQ9H444 224 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-208ENST00000504489 COG6Q9Y2V7 657 aa14.91□□□□□ -0.02
PDLIM5-208ENST00000504489 CHMP3Q9Y3E7 222 aa14.91□□□□□ -0.02
PDLIM5-208ENST00000504489 SNED1Q8TER0 1413 aa14.91□□□□□ -0.02
PDLIM5-208ENST00000504489 CCDC57Q2TAC2 916 aa14.9□□□□□ -0.02
PDLIM5-208ENST00000504489 CCDC93Q567U6 631 aa14.9□□□□□ -0.02
PDLIM5-208ENST00000504489 ARHGAP27Q6ZUM4 889 aa14.9□□□□□ -0.02
PDLIM5-208ENST00000504489 RTKN2Q8IZC4 609 aa14.9□□□□□ -0.02
PDLIM5-208ENST00000504489 IGHMBP2P38935 993 aaKnown RBP14.89□□□□□ -0.03
PDLIM5-208ENST00000504489 MTX1Q13505 466 aa14.89□□□□□ -0.03
PDLIM5-208ENST00000504489 TMX4Q9H1E5 349 aaPredicted RBP14.89□□□□□ -0.03
PDLIM5-208ENST00000504489 BSDC1Q9NW68 430 aaPredicted RBP14.89□□□□□ -0.03
PDLIM5-208ENST00000504489 SUPT16HQ9Y5B9 1047 aaKnown RBP14.89□□□□□ -0.03
PDLIM5-208ENST00000504489 CD44P16070 742 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-208ENST00000504489 OLFM4Q6UX06 510 aa14.88□□□□□ -0.03
PDLIM5-208ENST00000504489 ZBTB40Q9NUA8 1239 aa14.88□□□□□ -0.03
PDLIM5-208ENST00000504489 TIAM2Q8IVF5 1701 aa14.88□□□□□ -0.03
PDLIM5-208ENST00000504489 LTBP3Q9NS15 1303 aa14.88□□□□□ -0.03
PDLIM5-208ENST00000504489 UTRNP46939 3433 aa14.88□□□□□ -0.03
PDLIM5-208ENST00000504489 MPHOSPH8Q99549 860 aa14.87□□□□□ -0.03
PDLIM5-208ENST00000504489 DUOX1Q9NRD9 1551 aa14.86□□□□□ -0.03
PDLIM5-208ENST00000504489 NFKBIEO00221 500 aa14.86□□□□□ -0.03
PDLIM5-208ENST00000504489 RFX5P48382 616 aaPredicted RBP14.86□□□□□ -0.03
PDLIM5-208ENST00000504489 FKBP4Q02790 459 aaKnown RBP eCLIP14.86□□□□□ -0.03
PDLIM5-208ENST00000504489 TAF7LQ5H9L4 462 aa14.86□□□□□ -0.03
PDLIM5-208ENST00000504489 MPNDQ8N594 471 aa14.86□□□□□ -0.03
PDLIM5-208ENST00000504489 ZNF594Q96JF6 807 aaPredicted RBP14.86□□□□□ -0.03
PDLIM5-208ENST00000504489 PSMD1Q99460 953 aa14.86□□□□□ -0.03
PDLIM5-208ENST00000504489 TAOK3Q9H2K8 898 aa14.86□□□□□ -0.03
PDLIM5-208ENST00000504489 MINPP1Q9UNW1 487 aa14.86□□□□□ -0.03
PDLIM5-208ENST00000504489 PSME4Q14997 1843 aa14.86□□□□□ -0.03
PDLIM5-208ENST00000504489 LDHAL6AQ6ZMR3 332 aa14.85□□□□□ -0.03
PDLIM5-208ENST00000504489 SLC51AQ86UW1 340 aa14.85□□□□□ -0.03
PDLIM5-208ENST00000504489 RTFDC1Q9BY42 306 aaPredicted RBP14.85□□□□□ -0.03
PDLIM5-208ENST00000504489 PODXL2Q9NZ53 605 aa14.85□□□□□ -0.03
PDLIM5-208ENST00000504489 MYH13Q9UKX3 1938 aa14.85□□□□□ -0.03
PDLIM5-208ENST00000504489 SRGAP3O43295 1099 aa14.84□□□□□ -0.03
PDLIM5-208ENST00000504489 ATP8B2P98198 1209 aa14.84□□□□□ -0.03
PDLIM5-208ENST00000504489 RASSF7Q02833 373 aa14.84□□□□□ -0.03
PDLIM5-208ENST00000504489 PTPN12Q05209 780 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-208ENST00000504489 DPP8Q6V1X1 898 aaPredicted RBP14.84□□□□□ -0.03
PDLIM5-208ENST00000504489 C1orf115Q9H7X2 142 aa14.84□□□□□ -0.03
PDLIM5-208ENST00000504489 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
PDLIM5-208ENST00000504489 NSFL1CQ9UNZ2 370 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-208ENST00000504489 PNMA6EA0A0J9YXQ4 647 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 LMNB1P20700 586 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 GPSM2P81274 684 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 SUPT20HQ8NEM7 779 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 SSH3Q8TE77 659 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 ANKRD2Q9GZV1 360 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 VPS33BQ9H267 617 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 COPRSQ9NQ92 184 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 CNNM1Q9NRU3 951 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 ANKIB1Q9P2G1 1089 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 RIPOR2Q9Y4F9 1068 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 XDHP47989 1333 aa14.83□□□□□ -0.04
PDLIM5-208ENST00000504489 PRELPP51888 382 aa14.82□□□□□ -0.04
PDLIM5-208ENST00000504489 CHRNDQ07001 517 aa14.82□□□□□ -0.04
PDLIM5-208ENST00000504489 CEP85Q6P2H3 762 aa14.82□□□□□ -0.04
PDLIM5-208ENST00000504489 RPAP2Q8IXW5 612 aaPredicted RBP14.82□□□□□ -0.04
PDLIM5-208ENST00000504489 KLHDC4Q8TBB5 520 aa14.82□□□□□ -0.04
PDLIM5-208ENST00000504489 CRBNQ96SW2 442 aa14.82□□□□□ -0.04
PDLIM5-208ENST00000504489 PUS3Q9BZE2 481 aaKnown RBP14.82□□□□□ -0.04
PDLIM5-208ENST00000504489 SCN9AQ15858 1988 aa14.82□□□□□ -0.04
PDLIM5-208ENST00000504489 ARAP2Q8WZ64 1704 aa14.81□□□□□ -0.04
PDLIM5-208ENST00000504489 EYA2O00167 538 aa14.81□□□□□ -0.04
PDLIM5-208ENST00000504489 CIAO1O76071 339 aa14.81□□□□□ -0.04
PDLIM5-208ENST00000504489 ATP2B4P23634 1241 aa14.81□□□□□ -0.04
PDLIM5-208ENST00000504489 TBC1D16Q8TBP0 767 aa14.81□□□□□ -0.04
PDLIM5-208ENST00000504489 POLLQ9UGP5 575 aa14.81□□□□□ -0.04
PDLIM5-208ENST00000504489 GGA1Q9UJY5 639 aa14.81□□□□□ -0.04
PDLIM5-208ENST00000504489 LEMD3Q9Y2U8 911 aa14.81□□□□□ -0.04
PDLIM5-208ENST00000504489 MROH5Q6ZUA9 1318 aa14.81□□□□□ -0.04
PDLIM5-208ENST00000504489 CENPBP07199 599 aaPredicted RBP14.8□□□□□ -0.04
PDLIM5-208ENST00000504489 IARSP41252 1262 aaKnown RBP14.8□□□□□ -0.04
PDLIM5-208ENST00000504489 AAMPQ13685 434 aa14.8□□□□□ -0.04
PDLIM5-208ENST00000504489 LRRC24Q50LG9 513 aa14.8□□□□□ -0.04
PDLIM5-208ENST00000504489 C9orf131Q5VYM1 1079 aa14.8□□□□□ -0.04
PDLIM5-208ENST00000504489 ZNF277Q9NRM2 450 aaPredicted RBP14.8□□□□□ -0.04
PDLIM5-208ENST00000504489 PA2G4Q9UQ80 394 aaKnown RBP14.8□□□□□ -0.04
PDLIM5-208ENST00000504489 C6orf229H3BNL8 230 aa14.79□□□□□ -0.04
PDLIM5-208ENST00000504489 ZNF646O15015 1829 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms