RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 SP8Q8IXZ3 490 aa16.53■□□□□ 0.24
PDLIM7-212ENST00000504380 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-212ENST00000504380 CNNM1Q9NRU3 951 aa16.53■□□□□ 0.24
PDLIM7-212ENST00000504380 BSDC1Q9NW68 430 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-212ENST00000504380 ARFGEF1Q9Y6D6 1849 aa16.52■□□□□ 0.24
PDLIM7-212ENST00000504380 WTIPA6NIX2 430 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-212ENST00000504380 POLA2Q14181 598 aa16.52■□□□□ 0.24
PDLIM7-212ENST00000504380 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
PDLIM7-212ENST00000504380 MINPP1Q9UNW1 487 aa16.52■□□□□ 0.24
PDLIM7-212ENST00000504380 RASSF7Q02833 373 aa16.51■□□□□ 0.23
PDLIM7-212ENST00000504380 CCDC93Q567U6 631 aa16.51■□□□□ 0.23
PDLIM7-212ENST00000504380 RPAP2Q8IXW5 612 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-212ENST00000504380 GPR101Q96P66 508 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-212ENST00000504380 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-212ENST00000504380 SNAP23O00161 211 aa16.5■□□□□ 0.23
PDLIM7-212ENST00000504380 EYA2O00167 538 aa16.5■□□□□ 0.23
PDLIM7-212ENST00000504380 TAF5LO75529 589 aa16.5■□□□□ 0.23
PDLIM7-212ENST00000504380 CHRNDQ07001 517 aa16.5■□□□□ 0.23
PDLIM7-212ENST00000504380 MPNDQ8N594 471 aa16.5■□□□□ 0.23
PDLIM7-212ENST00000504380 COPRSQ9NQ92 184 aa16.5■□□□□ 0.23
PDLIM7-212ENST00000504380 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
PDLIM7-212ENST00000504380 LRRC37AA6NMS7 1700 aa16.49■□□□□ 0.23
PDLIM7-212ENST00000504380 NFKBIEO00221 500 aa16.49■□□□□ 0.23
PDLIM7-212ENST00000504380 ATG9AQ7Z3C6 839 aa16.49■□□□□ 0.23
PDLIM7-212ENST00000504380 TMC4Q7Z404 712 aa16.49■□□□□ 0.23
PDLIM7-212ENST00000504380 TMX4Q9H1E5 349 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-212ENST00000504380 ANKIB1Q9P2G1 1089 aa16.49■□□□□ 0.23
PDLIM7-212ENST00000504380 SNED1Q8TER0 1413 aa16.48■□□□□ 0.23
PDLIM7-212ENST00000504380 SURF6O75683 361 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-212ENST00000504380 PRELPP51888 382 aa16.48■□□□□ 0.23
PDLIM7-212ENST00000504380 DPP8Q6V1X1 898 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-212ENST00000504380 POLLQ9UGP5 575 aa16.48■□□□□ 0.23
PDLIM7-212ENST00000504380 EXOC6BQ9Y2D4 811 aa16.48■□□□□ 0.23
PDLIM7-212ENST00000504380 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-212ENST00000504380 C6orf229H3BNL8 230 aa16.47■□□□□ 0.23
PDLIM7-212ENST00000504380 APBB1O00213 710 aa16.47■□□□□ 0.23
PDLIM7-212ENST00000504380 METTL24Q5JXM2 366 aa16.47■□□□□ 0.23
PDLIM7-212ENST00000504380 SOGA3Q5TF21 947 aa16.47■□□□□ 0.23
PDLIM7-212ENST00000504380 CC2D2BQ6DHV5 1058 aa16.47■□□□□ 0.23
PDLIM7-212ENST00000504380 RTKN2Q8IZC4 609 aa16.47■□□□□ 0.23
PDLIM7-212ENST00000504380 ZNF277Q9NRM2 450 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-212ENST00000504380 A0A1B0GUL6 1792 aa16.46■□□□□ 0.23
PDLIM7-212ENST00000504380 FER1L6Q2WGJ9 1857 aa16.46■□□□□ 0.23
PDLIM7-212ENST00000504380 HMMRO75330 724 aa16.46■□□□□ 0.23
PDLIM7-212ENST00000504380 CIAO1O76071 339 aa16.46■□□□□ 0.23
PDLIM7-212ENST00000504380 UFL1O94874 794 aa16.46■□□□□ 0.23
PDLIM7-212ENST00000504380 NEFLP07196 543 aa16.46■□□□□ 0.23
PDLIM7-212ENST00000504380 FKBP4Q02790 459 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDLIM7-212ENST00000504380 G3BP1Q13283 466 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDLIM7-212ENST00000504380 OS9Q13438 667 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-212ENST00000504380 TBC1D16Q8TBP0 767 aa16.46■□□□□ 0.23
PDLIM7-212ENST00000504380 DUOX1Q9NRD9 1551 aa16.46■□□□□ 0.23
PDLIM7-212ENST00000504380 XDHP47989 1333 aa16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 RIMBP2O15034 1052 aa16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 TFCP2Q12800 502 aa16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 TAOK3Q9H2K8 898 aa16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 GPBP1L1Q9HC44 474 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 PODXL2Q9NZ53 605 aa16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 GGA1Q9UJY5 639 aa16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 NOP58Q9Y2X3 529 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 MROH5Q6ZUA9 1318 aa16.45■□□□□ 0.22
PDLIM7-212ENST00000504380 SASH1O94885 1247 aa16.44■□□□□ 0.22
PDLIM7-212ENST00000504380 IGHDP01880 384 aa16.44■□□□□ 0.22
PDLIM7-212ENST00000504380 ATP2B4P23634 1241 aa16.44■□□□□ 0.22
PDLIM7-212ENST00000504380 KLRK1P26718 216 aa16.44■□□□□ 0.22
PDLIM7-212ENST00000504380 IL15P40933 162 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-212ENST00000504380 VGLL2Q8N8G2 317 aa16.44■□□□□ 0.22
PDLIM7-212ENST00000504380 CEP126Q9P2H0 1117 aa16.44■□□□□ 0.22
PDLIM7-212ENST00000504380 KCNJ4P48050 445 aa16.43■□□□□ 0.22
PDLIM7-212ENST00000504380 AAMPQ13685 434 aa16.43■□□□□ 0.22
PDLIM7-212ENST00000504380 AOC3Q16853 763 aa16.43■□□□□ 0.22
PDLIM7-212ENST00000504380 TXNRD3Q86VQ6 643 aa16.43■□□□□ 0.22
PDLIM7-212ENST00000504380 PSMD1Q99460 953 aa16.43■□□□□ 0.22
PDLIM7-212ENST00000504380 RTFDC1Q9BY42 306 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-212ENST00000504380 FBXO3Q9UK99 471 aa16.43■□□□□ 0.22
PDLIM7-212ENST00000504380 CCDC88AQ3V6T2 1871 aa16.43■□□□□ 0.22
PDLIM7-212ENST00000504380 ZNF804BA4D1E1 1349 aa16.43■□□□□ 0.22
PDLIM7-212ENST00000504380 PDE8BO95263 885 aa16.42■□□□□ 0.22
PDLIM7-212ENST00000504380 PPIP5K2O43314 1243 aa16.41■□□□□ 0.22
PDLIM7-212ENST00000504380 IARSP41252 1262 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-212ENST00000504380 DOK7Q18PE1 504 aa16.41■□□□□ 0.22
PDLIM7-212ENST00000504380 WASHC4Q2M389 1173 aa16.41■□□□□ 0.22
PDLIM7-212ENST00000504380 GRIPAP1Q4V328 841 aa16.41■□□□□ 0.22
PDLIM7-212ENST00000504380 SUPT20HQ8NEM7 779 aa16.41■□□□□ 0.22
PDLIM7-212ENST00000504380 DCTPP1Q9H773 170 aa16.41■□□□□ 0.22
PDLIM7-212ENST00000504380 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
PDLIM7-212ENST00000504380 LEMD3Q9Y2U8 911 aa16.41■□□□□ 0.22
PDLIM7-212ENST00000504380 LTBP3Q9NS15 1303 aa16.41■□□□□ 0.22
PDLIM7-212ENST00000504380 COL4A5P29400 1685 aa16.4■□□□□ 0.22
PDLIM7-212ENST00000504380 SBF1O95248 1867 aa16.4■□□□□ 0.22
PDLIM7-212ENST00000504380 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-212ENST00000504380 FGFR2P21802 821 aa16.4■□□□□ 0.22
PDLIM7-212ENST00000504380 TIMM10P62072 90 aa16.4■□□□□ 0.22
PDLIM7-212ENST00000504380 HDAC1Q13547 482 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-212ENST00000504380 C9orf131Q5VYM1 1079 aa16.4■□□□□ 0.22
PDLIM7-212ENST00000504380 RNF181Q9P0P0 153 aa16.4■□□□□ 0.22
PDLIM7-212ENST00000504380 LMNB1P20700 586 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 214.5 ms