RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 LRRC24Q50LG9 513 aa19.65■□□□□ 0.74
VCAN-204ENST00000502527 Q6ZUG5 572 aa19.65■□□□□ 0.74
VCAN-204ENST00000502527 DSCC1Q9BVC3 393 aa19.65■□□□□ 0.74
VCAN-204ENST00000502527 ELP1O95163 1332 aa19.65■□□□□ 0.74
VCAN-204ENST00000502527 ZNF594Q96JF6 807 aaPredicted RBP19.64■□□□□ 0.74
VCAN-204ENST00000502527 TEX13AQ9BXU3 409 aaPredicted RBP19.64■□□□□ 0.74
VCAN-204ENST00000502527 A0A1B0GUL7 405 aa19.64■□□□□ 0.73
VCAN-204ENST00000502527 IFIT1P09914 478 aaKnown RBP19.64■□□□□ 0.73
VCAN-204ENST00000502527 TRIM28Q13263 835 aaKnown RBP19.64■□□□□ 0.73
VCAN-204ENST00000502527 ZMYM1Q5SVZ6 1142 aa19.64■□□□□ 0.73
VCAN-204ENST00000502527 FERMT3Q86UX7 667 aa19.64■□□□□ 0.73
VCAN-204ENST00000502527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.64■□□□□ 0.73
VCAN-204ENST00000502527 SCAND2PQ9GZW5 306 aaPredicted RBP19.64■□□□□ 0.73
VCAN-204ENST00000502527 CEP126Q9P2H0 1117 aa19.64■□□□□ 0.73
VCAN-204ENST00000502527 FBXO3Q9UK99 471 aa19.64■□□□□ 0.73
VCAN-204ENST00000502527 HSP90B1P14625 803 aaKnown RBP19.63■□□□□ 0.73
VCAN-204ENST00000502527 CCDC57Q2TAC2 916 aa19.63■□□□□ 0.73
VCAN-204ENST00000502527 ZKSCAN5Q9Y2L8 839 aa19.63■□□□□ 0.73
VCAN-204ENST00000502527 ZNF500O60304 480 aaPredicted RBP19.63■□□□□ 0.73
VCAN-204ENST00000502527 VSIG10Q8N0Z9 540 aa19.63■□□□□ 0.73
VCAN-204ENST00000502527 FGD1P98174 961 aa19.62■□□□□ 0.73
VCAN-204ENST00000502527 RNF113AO15541 343 aaKnown RBP19.61■□□□□ 0.73
VCAN-204ENST00000502527 OFD1O75665 1012 aa19.61■□□□□ 0.73
VCAN-204ENST00000502527 LRRFIP1Q32MZ4 808 aaKnown RBP19.61■□□□□ 0.73
VCAN-204ENST00000502527 KIF6Q6ZMV9 814 aa19.61■□□□□ 0.73
VCAN-204ENST00000502527 DHX32Q7L7V1 743 aaKnown RBP19.61■□□□□ 0.73
VCAN-204ENST00000502527 TTC6Q86TZ1 520 aa19.61■□□□□ 0.73
VCAN-204ENST00000502527 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.61■□□□□ 0.73
VCAN-204ENST00000502527 AKAP2Q9Y2D5 859 aa19.61■□□□□ 0.73
VCAN-204ENST00000502527 HCLS1P14317 486 aaPredicted RBP19.61■□□□□ 0.73
VCAN-204ENST00000502527 PUS3Q9BZE2 481 aaKnown RBP19.61■□□□□ 0.73
VCAN-204ENST00000502527 SHANK3Q9BYB0 1731 aa19.6■□□□□ 0.73
VCAN-204ENST00000502527 PCCAP05165 728 aaPredicted RBP19.6■□□□□ 0.73
VCAN-204ENST00000502527 PTMAP06454 111 aaKnown RBP19.6■□□□□ 0.73
VCAN-204ENST00000502527 GIMAP6Q6P9H5 292 aa19.6■□□□□ 0.73
VCAN-204ENST00000502527 STOX1Q6ZVD7 989 aa19.6■□□□□ 0.73
VCAN-204ENST00000502527 BRF1Q92994 677 aa19.6■□□□□ 0.73
VCAN-204ENST00000502527 LLPHQ9BRT6 129 aaKnown RBP19.6■□□□□ 0.73
VCAN-204ENST00000502527 FUCA2Q9BTY2 467 aa19.6■□□□□ 0.73
VCAN-204ENST00000502527 CCDC158Q5M9N0 1113 aa19.6■□□□□ 0.73
VCAN-204ENST00000502527 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.6■□□□□ 0.73
VCAN-204ENST00000502527 PLA2G12BQ9BX93 195 aa19.6■□□□□ 0.73
VCAN-204ENST00000502527 ZNF330Q9Y3S2 320 aaPredicted RBP19.6■□□□□ 0.73
VCAN-204ENST00000502527 JAK2O60674 1132 aa19.59■□□□□ 0.73
VCAN-204ENST00000502527 PFKFB2O60825 505 aa19.59■□□□□ 0.73
VCAN-204ENST00000502527 STARD3NLO95772 234 aa19.59■□□□□ 0.73
VCAN-204ENST00000502527 HSPD1P10809 573 aaKnown RBP19.59■□□□□ 0.73
VCAN-204ENST00000502527 ABCA3Q99758 1704 aa19.59■□□□□ 0.73
VCAN-204ENST00000502527 MAST3O60307 1309 aa19.58■□□□□ 0.73
VCAN-204ENST00000502527 GORABQ5T7V8 394 aa19.58■□□□□ 0.73
VCAN-204ENST00000502527 FAM173BQ6P4H8 233 aa19.58■□□□□ 0.73
VCAN-204ENST00000502527 SPATA32Q96LK8 384 aa19.58■□□□□ 0.73
VCAN-204ENST00000502527 SPEF2Q9C093 1822 aa19.58■□□□□ 0.72
VCAN-204ENST00000502527 GOLGA6L4A6NEF3 574 aa19.58■□□□□ 0.72
VCAN-204ENST00000502527 SLFNL1Q499Z3 407 aa19.58■□□□□ 0.72
VCAN-204ENST00000502527 TTC39AQ5SRH9 613 aa19.58■□□□□ 0.72
VCAN-204ENST00000502527 DNAJC10Q8IXB1 793 aa19.58■□□□□ 0.72
VCAN-204ENST00000502527 ZBTB38Q8NAP3 1195 aaPredicted RBP19.58■□□□□ 0.72
VCAN-204ENST00000502527 PIGBQ92521 554 aa19.58■□□□□ 0.72
VCAN-204ENST00000502527 ASAP1Q9ULH1 1129 aa19.58■□□□□ 0.72
VCAN-204ENST00000502527 ZNF335Q9H4Z2 1342 aaPredicted RBP19.57■□□□□ 0.72
VCAN-204ENST00000502527 H3BQV1 296 aa19.57■□□□□ 0.72
VCAN-204ENST00000502527 EXOSC10Q01780 885 aaKnown RBP19.57■□□□□ 0.72
VCAN-204ENST00000502527 SCRN1Q12765 414 aa19.57■□□□□ 0.72
VCAN-204ENST00000502527 TAF7LQ5H9L4 462 aa19.57■□□□□ 0.72
VCAN-204ENST00000502527 IFFO2Q5TF58 517 aa19.57■□□□□ 0.72
VCAN-204ENST00000502527 SMARCC2Q8TAQ2 1214 aa19.57■□□□□ 0.72
VCAN-204ENST00000502527 LRRC2Q9BYS8 371 aa19.57■□□□□ 0.72
VCAN-204ENST00000502527 ZSCAN16Q9H4T2 348 aaPredicted RBP19.57■□□□□ 0.72
VCAN-204ENST00000502527 CSF1RP07333 972 aa19.56■□□□□ 0.72
VCAN-204ENST00000502527 CCDC192P0DO97 292 aa19.56■□□□□ 0.72
VCAN-204ENST00000502527 IFIT5Q13325 482 aaKnown RBP19.56■□□□□ 0.72
VCAN-204ENST00000502527 LEO1Q8WVC0 666 aaPredicted RBP19.56■□□□□ 0.72
VCAN-204ENST00000502527 AGXT2Q9BYV1 514 aa19.56■□□□□ 0.72
VCAN-204ENST00000502527 USP25Q9UHP3 1055 aa19.56■□□□□ 0.72
VCAN-204ENST00000502527 E7EWF7 191 aa19.56■□□□□ 0.72
VCAN-204ENST00000502527 ZFYP08048 801 aaPredicted RBP19.56■□□□□ 0.72
VCAN-204ENST00000502527 FKBP4Q02790 459 aaKnown RBP eCLIP19.56■□□□□ 0.72
VCAN-204ENST00000502527 FAM89AQ96GI7 184 aa19.56■□□□□ 0.72
VCAN-204ENST00000502527 XAGE2Q96GT9 111 aa19.56■□□□□ 0.72
VCAN-204ENST00000502527 NUP62CLQ9H1M0 184 aa19.56■□□□□ 0.72
VCAN-204ENST00000502527 TFIP11Q9UBB9 837 aaKnown RBP19.56■□□□□ 0.72
VCAN-204ENST00000502527 KIF3AQ9Y496 699 aa19.56■□□□□ 0.72
VCAN-204ENST00000502527 KDM4AO75164 1064 aa19.55■□□□□ 0.72
VCAN-204ENST00000502527 HMGN5P82970 282 aaKnown RBP19.55■□□□□ 0.72
VCAN-204ENST00000502527 RESTQ13127 1097 aa19.55■□□□□ 0.72
VCAN-204ENST00000502527 CHMP4CQ96CF2 233 aa19.55■□□□□ 0.72
VCAN-204ENST00000502527 TOGARAM1Q9Y4F4 1720 aa19.55■□□□□ 0.72
VCAN-204ENST00000502527 MAP3K15Q6ZN16 1313 aa19.55■□□□□ 0.72
VCAN-204ENST00000502527 MAP3K11Q16584 847 aa19.55■□□□□ 0.72
VCAN-204ENST00000502527 DDX11Q96FC9 970 aa19.55■□□□□ 0.72
VCAN-204ENST00000502527 CTNNA3Q9UI47 895 aa19.55■□□□□ 0.72
VCAN-204ENST00000502527 M0R2C6 588 aa19.54■□□□□ 0.72
VCAN-204ENST00000502527 ADCY5O95622 1261 aa19.54■□□□□ 0.72
VCAN-204ENST00000502527 LIG1P18858 919 aa19.54■□□□□ 0.72
VCAN-204ENST00000502527 GIGYF2Q6Y7W6 1299 aaKnown RBP19.54■□□□□ 0.72
VCAN-204ENST00000502527 ABCC12Q96J65 1359 aa19.54■□□□□ 0.72
VCAN-204ENST00000502527 CDHR2Q9BYE9 1310 aa19.54■□□□□ 0.72
VCAN-204ENST00000502527 TPM2P07951 284 aa19.53■□□□□ 0.72
VCAN-204ENST00000502527 ADORA1P30542 326 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms