RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	DPP8	Q6V1X1	898 aa	Predicted RBP	10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	KLHDC4	Q8TBB5	520 aa		10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	PUS3	Q9BZE2	481 aa	Known RBP	10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	C1orf115	Q9H7X2	142 aa		10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	PODXL2	Q9NZ53	605 aa		10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	POLL	Q9UGP5	575 aa		10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	MINPP1	Q9UNW1	487 aa		10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	COG6	Q9Y2V7	657 aa		10.09	□□□□□ -0.79
EFNA1-205	ENST00000497282	XDH	P47989	1333 aa		10.08	□□□□□ -0.8
EFNA1-205	ENST00000497282	PSME4	Q14997	1843 aa		10.08	□□□□□ -0.8
EFNA1-205	ENST00000497282	RRP1	P56182	461 aa	Known RBP	10.08	□□□□□ -0.8
EFNA1-205	ENST00000497282	MVP	Q14764	893 aa	Known RBP	10.08	□□□□□ -0.8
EFNA1-205	ENST00000497282	TBC1D16	Q8TBP0	767 aa		10.08	□□□□□ -0.8
EFNA1-205	ENST00000497282	TMX4	Q9H1E5	349 aa	Predicted RBP	10.08	□□□□□ -0.8
EFNA1-205	ENST00000497282	ZNF541	Q9H0D2	1346 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	WDR90	Q96KV7	1748 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	SCN9A	Q15858	1988 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	PPIP5K2	O43314	1243 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	UFL1	O94874	794 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	GNAI2	P04899	355 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	PTPN12	Q05209	780 aa	Known RBP	10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	CHRND	Q07001	517 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	KIAA2012	Q0VF49	1180 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	MTX1	Q13505	466 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	LRRC24	Q50LG9	513 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	TAF7L	Q5H9L4	462 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	LDHAL6A	Q6ZMR3	332 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	MPHOSPH8	Q99549	860 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	ANKIB1	Q9P2G1	1089 aa		10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.07	□□□□□ -0.8
EFNA1-205	ENST00000497282	PNMA6E	A0A0J9YXQ4	647 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	C6orf229	H3BNL8	230 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	SNAP23	O00161	211 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	TAF5L	O75529	589 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	MS4A1	P11836	297 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	KLRK1	P26718	216 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	PDE3A	Q14432	1141 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	LARGE2	Q8N3Y3	721 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	SUPT20H	Q8NEM7	779 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	HELB	Q8NG08	1087 aa	Predicted RBP	10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	CNNM1	Q9NRU3	951 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	GGA1	Q9UJY5	639 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	PA2G4	Q9UQ80	394 aa	Known RBP	10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	RIPOR2	Q9Y4F9	1068 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	ARAP2	Q8WZ64	1704 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	IRS2	Q9Y4H2	1338 aa		10.06	□□□□□ -0.8
EFNA1-205	ENST00000497282	MED23	Q9ULK4	1368 aa		10.05	□□□□□ -0.8
EFNA1-205	ENST00000497282	YDJC	A8MPS7	323 aa		10.05	□□□□□ -0.8
EFNA1-205	ENST00000497282	FZD9	O00144	591 aa		10.05	□□□□□ -0.8
EFNA1-205	ENST00000497282	RIMBP2	O15034	1052 aa		10.05	□□□□□ -0.8
EFNA1-205	ENST00000497282	SRGAP3	O43295	1099 aa		10.05	□□□□□ -0.8
EFNA1-205	ENST00000497282	ATP2B4	P23634	1241 aa		10.05	□□□□□ -0.8
EFNA1-205	ENST00000497282	TXNRD3	Q86VQ6	643 aa		10.05	□□□□□ -0.8
EFNA1-205	ENST00000497282	VGLL2	Q8N8G2	317 aa		10.05	□□□□□ -0.8
EFNA1-205	ENST00000497282	ZNF526	Q8TF50	670 aa	Predicted RBP	10.05	□□□□□ -0.8
EFNA1-205	ENST00000497282	DDX19B	Q9UMR2	479 aa		10.05	□□□□□ -0.8
EFNA1-205	ENST00000497282	HDAC5	Q9UQL6	1122 aa		10.05	□□□□□ -0.8
EFNA1-205	ENST00000497282	EYA2	O00167	538 aa		10.04	□□□□□ -0.8
EFNA1-205	ENST00000497282	WASHC4	Q2M389	1173 aa		10.04	□□□□□ -0.8
EFNA1-205	ENST00000497282	ATG9A	Q7Z3C6	839 aa		10.04	□□□□□ -0.8
EFNA1-205	ENST00000497282	NIM1K	Q8IY84	436 aa		10.04	□□□□□ -0.8
EFNA1-205	ENST00000497282	ANKRD2	Q9GZV1	360 aa		10.04	□□□□□ -0.8
EFNA1-205	ENST00000497282	SIL1	Q9H173	461 aa		10.04	□□□□□ -0.8
EFNA1-205	ENST00000497282	VPS33B	Q9H267	617 aa		10.04	□□□□□ -0.8
EFNA1-205	ENST00000497282	DBNDD1	Q9H9R9	158 aa		10.04	□□□□□ -0.8
EFNA1-205	ENST00000497282	COPRS	Q9NQ92	184 aa		10.04	□□□□□ -0.8
EFNA1-205	ENST00000497282	ZBTB40	Q9NUA8	1239 aa		10.04	□□□□□ -0.8
EFNA1-205	ENST00000497282	ZNF804B	A4D1E1	1349 aa		10.04	□□□□□ -0.8
EFNA1-205	ENST00000497282	GLTPD2	A6NH11	291 aa		10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	DDN	O94850	711 aa	Predicted RBP	10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	POLA2	Q14181	598 aa		10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	DOK7	Q18PE1	504 aa		10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	CEP85	Q6P2H3	762 aa		10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	SSH3	Q8TE77	659 aa		10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	JDP2	Q8WYK2	163 aa		10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	EYA3	Q99504	573 aa		10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	NMRK2	Q9NPI5	230 aa		10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	LEMD3	Q9Y2U8	911 aa		10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	MROH5	Q6ZUA9	1318 aa		10.03	□□□□□ -0.8
EFNA1-205	ENST00000497282	ECE2	O60344	883 aa		10.02	□□□□□ -0.81
EFNA1-205	ENST00000497282	CIAO1	O76071	339 aa		10.02	□□□□□ -0.81
EFNA1-205	ENST00000497282	ATP8B2	P98198	1209 aa		10.02	□□□□□ -0.81
EFNA1-205	ENST00000497282	CXCL9	Q07325	125 aa		10.02	□□□□□ -0.81
EFNA1-205	ENST00000497282	METTL24	Q5JXM2	366 aa		10.02	□□□□□ -0.81
EFNA1-205	ENST00000497282	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.02	□□□□□ -0.81
EFNA1-205	ENST00000497282	KCNQ5	Q9NR82	932 aa		10.02	□□□□□ -0.81
EFNA1-205	ENST00000497282	ZNRF3	Q9ULT6	936 aa		10.02	□□□□□ -0.81
EFNA1-205	ENST00000497282	SCN4A	P35499	1836 aa		10.02	□□□□□ -0.81
EFNA1-205	ENST00000497282	ADAMTSL1	Q8N6G6	1762 aa		10.01	□□□□□ -0.81
EFNA1-205	ENST00000497282	POTEC	B2RU33	542 aa		10.01	□□□□□ -0.81
EFNA1-205	ENST00000497282	RAD17	O75943	681 aa		10.01	□□□□□ -0.81
EFNA1-205	ENST00000497282	PDE8B	O95263	885 aa		10.01	□□□□□ -0.81
EFNA1-205	ENST00000497282	FGFR2	P21802	821 aa		10.01	□□□□□ -0.81
EFNA1-205	ENST00000497282	KCNJ4	P48050	445 aa		10.01	□□□□□ -0.81
EFNA1-205	ENST00000497282	EIF6	P56537	245 aa	Known RBP	10.01	□□□□□ -0.81
EFNA1-205	ENST00000497282	C15orf52	Q6ZUT6	534 aa	Known RBP	10.01	□□□□□ -0.81

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