RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 RTL9Q8NET4 1388 aa10.22□□□□□ -0.77
SMARCD3-215ENST00000496530 IQCA1LA6NCM1 817 aa10.21□□□□□ -0.77
SMARCD3-215ENST00000496530 C6orf229H3BNL8 230 aa10.21□□□□□ -0.77
SMARCD3-215ENST00000496530 ITGA6P23229 1130 aa10.21□□□□□ -0.77
SMARCD3-215ENST00000496530 WASHC4Q2M389 1173 aa10.21□□□□□ -0.77
SMARCD3-215ENST00000496530 CCDC57Q2TAC2 916 aa10.21□□□□□ -0.77
SMARCD3-215ENST00000496530 RTFDC1Q9BY42 306 aaPredicted RBP10.21□□□□□ -0.77
SMARCD3-215ENST00000496530 SEC31BQ9NQW1 1179 aa10.21□□□□□ -0.77
SMARCD3-215ENST00000496530 GGA1Q9UJY5 639 aa10.21□□□□□ -0.77
SMARCD3-215ENST00000496530 DDX19BQ9UMR2 479 aa10.21□□□□□ -0.77
SMARCD3-215ENST00000496530 LRRC37AA6NMS7 1700 aa10.21□□□□□ -0.78
SMARCD3-215ENST00000496530 ZBTB7BO15156 539 aaPredicted RBP10.2□□□□□ -0.78
SMARCD3-215ENST00000496530 VEGFAP15692 232 aaPredicted RBP10.2□□□□□ -0.78
SMARCD3-215ENST00000496530 TAF1P21675 1872 aa10.2□□□□□ -0.78
SMARCD3-215ENST00000496530 LMOD1P29536 600 aaPredicted RBP10.2□□□□□ -0.78
SMARCD3-215ENST00000496530 XDHP47989 1333 aa10.2□□□□□ -0.78
SMARCD3-215ENST00000496530 AOC3Q16853 763 aa10.2□□□□□ -0.78
SMARCD3-215ENST00000496530 ZC3H12CQ9C0D7 883 aaKnown RBP10.2□□□□□ -0.78
SMARCD3-215ENST00000496530 BCL11AQ9H165 835 aa10.2□□□□□ -0.78
SMARCD3-215ENST00000496530 GREM2Q9H772 168 aa10.2□□□□□ -0.78
SMARCD3-215ENST00000496530 RRAGCQ9HB90 399 aa10.2□□□□□ -0.78
SMARCD3-215ENST00000496530 BSDC1Q9NW68 430 aaPredicted RBP10.2□□□□□ -0.78
SMARCD3-215ENST00000496530 FZD9O00144 591 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 CSF1RP07333 972 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 GNAI3P08754 354 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 UBTFL1P0CB47 393 aaPredicted RBP10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 ATP2B4P23634 1241 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 KCNJ4P48050 445 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 PRELPP51888 382 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 CASP7P55210 303 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 KIAA2012Q0VF49 1180 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 ANKRD2Q9GZV1 360 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 USP44Q9H0E7 712 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 C1orf115Q9H7X2 142 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 SPEF2Q9C093 1822 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 WDR90Q96KV7 1748 aa10.19□□□□□ -0.78
SMARCD3-215ENST00000496530 SNED1Q8TER0 1413 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 TOMM70O94826 608 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 DDNO94850 711 aaPredicted RBP10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 UFL1O94874 794 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 GNAI2P04899 355 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 C1QTNF8P60827 252 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 GPSM2P81274 684 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 TNIP1Q15025 636 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 FAM161AQ3B820 660 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 LMBR1LQ6UX01 489 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 PPP4R3CPQ6ZMV5 832 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 GPC2Q8N158 579 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 NMRK2Q9NPI5 230 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 CNNM1Q9NRU3 951 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 PODXL2Q9NZ53 605 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 ZNRF3Q9ULT6 936 aa10.18□□□□□ -0.78
SMARCD3-215ENST00000496530 UTYO14607 1347 aa10.17□□□□□ -0.78
SMARCD3-215ENST00000496530 RIMBP2O15034 1052 aa10.17□□□□□ -0.78
SMARCD3-215ENST00000496530 NBPF7P0C2Y1 421 aaPredicted RBP10.17□□□□□ -0.78
SMARCD3-215ENST00000496530 FOXO4P98177 505 aa10.17□□□□□ -0.78
SMARCD3-215ENST00000496530 LDHAL6AQ6ZMR3 332 aa10.17□□□□□ -0.78
SMARCD3-215ENST00000496530 TBC1D16Q8TBP0 767 aa10.17□□□□□ -0.78
SMARCD3-215ENST00000496530 CCDC136Q96JN2 1154 aa10.17□□□□□ -0.78
SMARCD3-215ENST00000496530 MEIS3Q99687 375 aa10.17□□□□□ -0.78
SMARCD3-215ENST00000496530 LEMD3Q9Y2U8 911 aa10.17□□□□□ -0.78
SMARCD3-215ENST00000496530 GJA3Q9Y6H8 435 aa10.17□□□□□ -0.78
SMARCD3-215ENST00000496530 SCN4AP35499 1836 aa10.17□□□□□ -0.78
SMARCD3-215ENST00000496530 KIF3CO14782 793 aa10.16□□□□□ -0.78
SMARCD3-215ENST00000496530 CIAPIN1Q6FI81 312 aa10.16□□□□□ -0.78
SMARCD3-215ENST00000496530 SMC1BQ8NDV3 1235 aa10.16□□□□□ -0.78
SMARCD3-215ENST00000496530 RBM46Q8TBY0 533 aaKnown RBP10.16□□□□□ -0.78
SMARCD3-215ENST00000496530 SUCLG2Q96I99 432 aa10.16□□□□□ -0.78
SMARCD3-215ENST00000496530 PPP4R2Q9NY27 417 aa10.16□□□□□ -0.78
SMARCD3-215ENST00000496530 POLLQ9UGP5 575 aa10.16□□□□□ -0.78
SMARCD3-215ENST00000496530 HACL1Q9UJ83 578 aa10.16□□□□□ -0.78
SMARCD3-215ENST00000496530 MINPP1Q9UNW1 487 aa10.16□□□□□ -0.78
SMARCD3-215ENST00000496530 LRRFIP2Q9Y608 721 aaKnown RBP10.16□□□□□ -0.78
SMARCD3-215ENST00000496530 UTRNP46939 3433 aa10.16□□□□□ -0.78
SMARCD3-215ENST00000496530 ZNF541Q9H0D2 1346 aa10.15□□□□□ -0.78
SMARCD3-215ENST00000496530 ECE2O60344 883 aa10.15□□□□□ -0.78
SMARCD3-215ENST00000496530 FSTL1Q12841 308 aa10.15□□□□□ -0.78
SMARCD3-215ENST00000496530 PNMA8AQ86V59 439 aaPredicted RBP10.15□□□□□ -0.78
SMARCD3-215ENST00000496530 L3MBTL3Q96JM7 780 aaPredicted RBP10.15□□□□□ -0.78
SMARCD3-215ENST00000496530 RWDD1Q9H446 243 aaPredicted RBP10.15□□□□□ -0.78
SMARCD3-215ENST00000496530 BICC1Q9H694 974 aaKnown RBP10.15□□□□□ -0.78
SMARCD3-215ENST00000496530 DBNDD1Q9H9R9 158 aa10.15□□□□□ -0.78
SMARCD3-215ENST00000496530 ZBTB40Q9NUA8 1239 aa10.15□□□□□ -0.78
SMARCD3-215ENST00000496530 MED23Q9ULK4 1368 aa10.14□□□□□ -0.79
SMARCD3-215ENST00000496530 ZNF804BA4D1E1 1349 aa10.14□□□□□ -0.79
SMARCD3-215ENST00000496530 ATP8B2P98198 1209 aa10.14□□□□□ -0.79
SMARCD3-215ENST00000496530 CHRNDQ07001 517 aa10.14□□□□□ -0.79
SMARCD3-215ENST00000496530 RABL6Q3YEC7 729 aaPredicted RBP10.14□□□□□ -0.79
SMARCD3-215ENST00000496530 ERICH6BQ5W0A0 696 aa10.14□□□□□ -0.79
SMARCD3-215ENST00000496530 B4GALNT3Q6L9W6 998 aa10.14□□□□□ -0.79
SMARCD3-215ENST00000496530 CLEC11AQ9Y240 323 aa10.14□□□□□ -0.79
SMARCD3-215ENST00000496530 DUOX1Q9NRD9 1551 aa10.14□□□□□ -0.79
SMARCD3-215ENST00000496530 LTBP1Q14766 1721 aa10.13□□□□□ -0.79
SMARCD3-215ENST00000496530 MROH5Q6ZUA9 1318 aa10.13□□□□□ -0.79
SMARCD3-215ENST00000496530 APBB1O00213 710 aa10.13□□□□□ -0.79
SMARCD3-215ENST00000496530 EPHX2P34913 555 aa10.13□□□□□ -0.79
SMARCD3-215ENST00000496530 DOK7Q18PE1 504 aa10.13□□□□□ -0.79
SMARCD3-215ENST00000496530 EAPPQ56P03 285 aaPredicted RBP10.13□□□□□ -0.79
SMARCD3-215ENST00000496530 EPHA10Q5JZY3 1008 aa10.13□□□□□ -0.79
SMARCD3-215ENST00000496530 PODNQ7Z5L7 613 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms