RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 ADAMTSL1Q8N6G6 1762 aa22.22■■□□□ 1.15
RHBDD3-207ENST00000496342 LMBR1LQ6UX01 489 aa22.21■■□□□ 1.15
RHBDD3-207ENST00000496342 L3MBTL3Q96JM7 780 aaPredicted RBP22.21■■□□□ 1.15
RHBDD3-207ENST00000496342 TNNQ9UQP3 1299 aa22.21■■□□□ 1.15
RHBDD3-207ENST00000496342 ZNF646O15015 1829 aaPredicted RBP22.21■■□□□ 1.15
RHBDD3-207ENST00000496342 BCAR3O75815 825 aa22.2■■□□□ 1.14
RHBDD3-207ENST00000496342 DOK7Q18PE1 504 aa22.2■■□□□ 1.14
RHBDD3-207ENST00000496342 WASHC4Q2M389 1173 aa22.2■■□□□ 1.14
RHBDD3-207ENST00000496342 RBM46Q8TBY0 533 aaKnown RBP22.2■■□□□ 1.14
RHBDD3-207ENST00000496342 ZNF594Q96JF6 807 aaPredicted RBP22.2■■□□□ 1.14
RHBDD3-207ENST00000496342 PODXL2Q9NZ53 605 aa22.2■■□□□ 1.14
RHBDD3-207ENST00000496342 ZNRF3Q9ULT6 936 aa22.2■■□□□ 1.14
RHBDD3-207ENST00000496342 MINPP1Q9UNW1 487 aa22.2■■□□□ 1.14
RHBDD3-207ENST00000496342 RAD17O75943 681 aa22.19■■□□□ 1.14
RHBDD3-207ENST00000496342 IGHMBP2P38935 993 aaKnown RBP22.19■■□□□ 1.14
RHBDD3-207ENST00000496342 CXCL9Q07325 125 aa22.19■■□□□ 1.14
RHBDD3-207ENST00000496342 GPC2Q8N158 579 aa22.19■■□□□ 1.14
RHBDD3-207ENST00000496342 VPS33BQ9H267 617 aa22.19■■□□□ 1.14
RHBDD3-207ENST00000496342 BSDC1Q9NW68 430 aaPredicted RBP22.19■■□□□ 1.14
RHBDD3-207ENST00000496342 GGA1Q9UJY5 639 aa22.19■■□□□ 1.14
RHBDD3-207ENST00000496342 UTYO14607 1347 aa22.19■■□□□ 1.14
RHBDD3-207ENST00000496342 XDHP47989 1333 aa22.19■■□□□ 1.14
RHBDD3-207ENST00000496342 ANKRD18BA2A2Z9 1011 aa22.18■■□□□ 1.14
RHBDD3-207ENST00000496342 ECE2O60344 883 aa22.17■■□□□ 1.14
RHBDD3-207ENST00000496342 SCNN1DP51172 638 aa22.17■■□□□ 1.14
RHBDD3-207ENST00000496342 BRPF1P55201 1214 aaPredicted RBP22.17■■□□□ 1.14
RHBDD3-207ENST00000496342 USP44Q9H0E7 712 aa22.17■■□□□ 1.14
RHBDD3-207ENST00000496342 TAF1DQ9H5J8 278 aaPredicted RBP22.17■■□□□ 1.14
RHBDD3-207ENST00000496342 BICC1Q9H694 974 aaKnown RBP22.17■■□□□ 1.14
RHBDD3-207ENST00000496342 KCNQ5Q9NR82 932 aa22.17■■□□□ 1.14
RHBDD3-207ENST00000496342 IFIT5Q13325 482 aaKnown RBP22.16■■□□□ 1.14
RHBDD3-207ENST00000496342 ANKRD44Q8N8A2 993 aa22.16■■□□□ 1.14
RHBDD3-207ENST00000496342 EYA3Q99504 573 aa22.16■■□□□ 1.14
RHBDD3-207ENST00000496342 MPHOSPH8Q99549 860 aa22.16■■□□□ 1.14
RHBDD3-207ENST00000496342 HACL1Q9UJ83 578 aa22.16■■□□□ 1.14
RHBDD3-207ENST00000496342 KIF16BQ96L93 1317 aa22.15■■□□□ 1.14
RHBDD3-207ENST00000496342 IQCA1LA6NCM1 817 aa22.15■■□□□ 1.14
RHBDD3-207ENST00000496342 KLRK1P26718 216 aa22.15■■□□□ 1.14
RHBDD3-207ENST00000496342 EAPPQ56P03 285 aaPredicted RBP22.15■■□□□ 1.14
RHBDD3-207ENST00000496342 CIAPIN1Q6FI81 312 aa22.15■■□□□ 1.14
RHBDD3-207ENST00000496342 API5Q9BZZ5 524 aaKnown RBP22.15■■□□□ 1.14
RHBDD3-207ENST00000496342 SHTN1A0MZ66 631 aa22.14■■□□□ 1.13
RHBDD3-207ENST00000496342 SNAP23O00161 211 aa22.14■■□□□ 1.13
RHBDD3-207ENST00000496342 HSPA6P17066 643 aa22.14■■□□□ 1.13
RHBDD3-207ENST00000496342 ATP2B4P23634 1241 aa22.14■■□□□ 1.13
RHBDD3-207ENST00000496342 EPHX2P34913 555 aa22.14■■□□□ 1.13
RHBDD3-207ENST00000496342 EPS15P42566 896 aa22.14■■□□□ 1.13
RHBDD3-207ENST00000496342 CCT4P50991 539 aaKnown RBP22.14■■□□□ 1.13
RHBDD3-207ENST00000496342 SMC1BQ8NDV3 1235 aa22.14■■□□□ 1.13
RHBDD3-207ENST00000496342 HELBQ8NG08 1087 aaPredicted RBP22.14■■□□□ 1.13
RHBDD3-207ENST00000496342 FRAT1Q92837 279 aaPredicted RBP22.14■■□□□ 1.13
RHBDD3-207ENST00000496342 GMPSP49915 693 aaPredicted RBP22.13■■□□□ 1.13
RHBDD3-207ENST00000496342 CHRNDQ07001 517 aa22.13■■□□□ 1.13
RHBDD3-207ENST00000496342 ZC3H12CQ9C0D7 883 aaKnown RBP22.13■■□□□ 1.13
RHBDD3-207ENST00000496342 PSMD14O00487 310 aa22.12■■□□□ 1.13
RHBDD3-207ENST00000496342 TAF5LO75529 589 aa22.12■■□□□ 1.13
RHBDD3-207ENST00000496342 TRIM27P14373 513 aa22.12■■□□□ 1.13
RHBDD3-207ENST00000496342 CCDC57Q2TAC2 916 aa22.12■■□□□ 1.13
RHBDD3-207ENST00000496342 TAF7LQ5H9L4 462 aa22.12■■□□□ 1.13
RHBDD3-207ENST00000496342 TXNRD3Q86VQ6 643 aa22.12■■□□□ 1.13
RHBDD3-207ENST00000496342 ZBTB12Q9Y330 459 aaPredicted RBP22.12■■□□□ 1.13
RHBDD3-207ENST00000496342 LMOD1P29536 600 aaPredicted RBP22.11■■□□□ 1.13
RHBDD3-207ENST00000496342 HTRA3P83110 453 aa22.11■■□□□ 1.13
RHBDD3-207ENST00000496342 FSTL1Q12841 308 aa22.11■■□□□ 1.13
RHBDD3-207ENST00000496342 RABL6Q3YEC7 729 aaPredicted RBP22.11■■□□□ 1.13
RHBDD3-207ENST00000496342 CLUAP1Q96AJ1 413 aa22.11■■□□□ 1.13
RHBDD3-207ENST00000496342 PUS3Q9BZE2 481 aaKnown RBP22.11■■□□□ 1.13
RHBDD3-207ENST00000496342 MED23Q9ULK4 1368 aa22.11■■□□□ 1.13
RHBDD3-207ENST00000496342 KLHDC4Q8TBB5 520 aa22.1■■□□□ 1.13
RHBDD3-207ENST00000496342 MEIS3Q99687 375 aa22.1■■□□□ 1.13
RHBDD3-207ENST00000496342 G3V3G9 751 aa22.09■■□□□ 1.13
RHBDD3-207ENST00000496342 DCAF8Q5TAQ9 597 aa22.09■■□□□ 1.13
RHBDD3-207ENST00000496342 CHADLQ6NUI6 762 aa22.09■■□□□ 1.13
RHBDD3-207ENST00000496342 GPRC5DQ9NZD1 345 aa22.09■■□□□ 1.13
RHBDD3-207ENST00000496342 ZNF804BA4D1E1 1349 aa22.08■■□□□ 1.13
RHBDD3-207ENST00000496342 PLIN1O60240 522 aa22.08■■□□□ 1.13
RHBDD3-207ENST00000496342 TNIP1Q15025 636 aa22.08■■□□□ 1.13
RHBDD3-207ENST00000496342 LDHAL6AQ6ZMR3 332 aa22.08■■□□□ 1.13
RHBDD3-207ENST00000496342 ARHGAP45Q92619 1136 aa22.08■■□□□ 1.13
RHBDD3-207ENST00000496342 ANKRD2Q9GZV1 360 aa22.08■■□□□ 1.13
RHBDD3-207ENST00000496342 CNNM1Q9NRU3 951 aa22.08■■□□□ 1.13
RHBDD3-207ENST00000496342 CLEC11AQ9Y240 323 aa22.08■■□□□ 1.13
RHBDD3-207ENST00000496342 POLR2AP24928 1970 aaKnown RBP22.08■■□□□ 1.12
RHBDD3-207ENST00000496342 UBTFL1P0CB47 393 aaPredicted RBP22.07■■□□□ 1.12
RHBDD3-207ENST00000496342 ATF7IPQ6VMQ6 1270 aa22.07■■□□□ 1.12
RHBDD3-207ENST00000496342 LDHDQ86WU2 507 aa22.07■■□□□ 1.12
RHBDD3-207ENST00000496342 LEMD3Q9Y2U8 911 aa22.07■■□□□ 1.12
RHBDD3-207ENST00000496342 KCNJ4P48050 445 aa22.06■■□□□ 1.12
RHBDD3-207ENST00000496342 LRRC24Q50LG9 513 aa22.06■■□□□ 1.12
RHBDD3-207ENST00000496342 MAP1SQ66K74 1059 aaPredicted RBP22.06■■□□□ 1.12
RHBDD3-207ENST00000496342 INTS3Q68E01 1043 aaKnown RBP22.06■■□□□ 1.12
RHBDD3-207ENST00000496342 LRRFIP2Q9Y608 721 aaKnown RBP22.06■■□□□ 1.12
RHBDD3-207ENST00000496342 IRS2Q9Y4H2 1338 aa22.06■■□□□ 1.12
RHBDD3-207ENST00000496342 MICALL2Q8IY33 904 aa22.05■■□□□ 1.12
RHBDD3-207ENST00000496342 TRPM4Q8TD43 1214 aa22.05■■□□□ 1.12
RHBDD3-207ENST00000496342 IPO8O15397 1037 aaKnown RBP22.04■■□□□ 1.12
RHBDD3-207ENST00000496342 ZKSCAN2Q63HK3 967 aa22.04■■□□□ 1.12
RHBDD3-207ENST00000496342 MXD3Q9BW11 206 aa22.04■■□□□ 1.12
RHBDD3-207ENST00000496342 TRPM7Q96QT4 1865 aa22.04■■□□□ 1.12
RHBDD3-207ENST00000496342 EGFRP00533 1210 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms