RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 CNNM1Q9NRU3 951 aa12.06□□□□□ -0.48
PRPF3-207ENST00000496202 BSDC1Q9NW68 430 aaPredicted RBP12.06□□□□□ -0.48
PRPF3-207ENST00000496202 FBXO3Q9UK99 471 aa12.06□□□□□ -0.48
PRPF3-207ENST00000496202 COL4A1P02462 1669 aa12.06□□□□□ -0.48
PRPF3-207ENST00000496202 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
PRPF3-207ENST00000496202 SRGAP3O43295 1099 aa12.05□□□□□ -0.48
PRPF3-207ENST00000496202 FKBP4Q02790 459 aaKnown RBP eCLIP12.05□□□□□ -0.48
PRPF3-207ENST00000496202 RASSF7Q02833 373 aa12.05□□□□□ -0.48
PRPF3-207ENST00000496202 LDHAL6AQ6ZMR3 332 aa12.05□□□□□ -0.48
PRPF3-207ENST00000496202 MPNDQ8N594 471 aa12.05□□□□□ -0.48
PRPF3-207ENST00000496202 ANKIB1Q9P2G1 1089 aa12.05□□□□□ -0.48
PRPF3-207ENST00000496202 NFKBIEO00221 500 aa12.04□□□□□ -0.48
PRPF3-207ENST00000496202 TPRNQ4KMQ1 711 aa12.04□□□□□ -0.48
PRPF3-207ENST00000496202 SUPT20HQ8NEM7 779 aa12.04□□□□□ -0.48
PRPF3-207ENST00000496202 ZNF594Q96JF6 807 aaPredicted RBP12.04□□□□□ -0.48
PRPF3-207ENST00000496202 NSFL1CQ9UNZ2 370 aaKnown RBP12.04□□□□□ -0.48
PRPF3-207ENST00000496202 XDHP47989 1333 aa12.04□□□□□ -0.48
PRPF3-207ENST00000496202 LTBP3Q9NS15 1303 aa12.04□□□□□ -0.48
PRPF3-207ENST00000496202 SBF1O95248 1867 aa12.04□□□□□ -0.48
PRPF3-207ENST00000496202 C6orf229H3BNL8 230 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 UFL1O94874 794 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 KCNJ4P48050 445 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 GPSM2P81274 684 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 MTX1Q13505 466 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 SLC51AQ86UW1 340 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 CRBNQ96SW2 442 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 PSMD1Q99460 953 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 ANKRD2Q9GZV1 360 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 ZBTB40Q9NUA8 1239 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 RNF181Q9P0P0 153 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 GGA1Q9UJY5 639 aa12.03□□□□□ -0.48
PRPF3-207ENST00000496202 HMMRO75330 724 aa12.02□□□□□ -0.49
PRPF3-207ENST00000496202 LMNB1P20700 586 aa12.02□□□□□ -0.49
PRPF3-207ENST00000496202 ATP8B2P98198 1209 aa12.02□□□□□ -0.49
PRPF3-207ENST00000496202 KLHDC4Q8TBB5 520 aa12.02□□□□□ -0.49
PRPF3-207ENST00000496202 EYA3Q99504 573 aa12.02□□□□□ -0.49
PRPF3-207ENST00000496202 SIL1Q9H173 461 aa12.02□□□□□ -0.49
PRPF3-207ENST00000496202 ZNF277Q9NRM2 450 aaPredicted RBP12.02□□□□□ -0.49
PRPF3-207ENST00000496202 MINPP1Q9UNW1 487 aa12.02□□□□□ -0.49
PRPF3-207ENST00000496202 A0A1B0GUL6 1792 aa12.02□□□□□ -0.49
PRPF3-207ENST00000496202 DICER1Q9UPY3 1922 aaKnown RBP12.01□□□□□ -0.49
PRPF3-207ENST00000496202 EYA2O00167 538 aa12.01□□□□□ -0.49
PRPF3-207ENST00000496202 PPIP5K2O43314 1243 aa12.01□□□□□ -0.49
PRPF3-207ENST00000496202 ATP2B4P23634 1241 aa12.01□□□□□ -0.49
PRPF3-207ENST00000496202 PTPN12Q05209 780 aaKnown RBP12.01□□□□□ -0.49
PRPF3-207ENST00000496202 CHRNDQ07001 517 aa12.01□□□□□ -0.49
PRPF3-207ENST00000496202 OS9Q13438 667 aaPredicted RBP12.01□□□□□ -0.49
PRPF3-207ENST00000496202 METTL24Q5JXM2 366 aa12.01□□□□□ -0.49
PRPF3-207ENST00000496202 C9orf131Q5VYM1 1079 aa12.01□□□□□ -0.49
PRPF3-207ENST00000496202 CEP85Q6P2H3 762 aa12.01□□□□□ -0.49
PRPF3-207ENST00000496202 PODXL2Q9NZ53 605 aa12.01□□□□□ -0.49
PRPF3-207ENST00000496202 MROH5Q6ZUA9 1318 aa12.01□□□□□ -0.49
PRPF3-207ENST00000496202 SNED1Q8TER0 1413 aa12.01□□□□□ -0.49
PRPF3-207ENST00000496202 DUOX1Q9NRD9 1551 aa12.01□□□□□ -0.49
PRPF3-207ENST00000496202 LTBP1Q14766 1721 aa12□□□□□ -0.49
PRPF3-207ENST00000496202 TIAM2Q8IVF5 1701 aa12□□□□□ -0.49
PRPF3-207ENST00000496202 PNMA6EA0A0J9YXQ4 647 aa12□□□□□ -0.49
PRPF3-207ENST00000496202 G3V3G9 751 aa12□□□□□ -0.49
PRPF3-207ENST00000496202 CIAO1O76071 339 aa12□□□□□ -0.49
PRPF3-207ENST00000496202 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
PRPF3-207ENST00000496202 RFX5P48382 616 aaPredicted RBP12□□□□□ -0.49
PRPF3-207ENST00000496202 LRRC24Q50LG9 513 aa12□□□□□ -0.49
PRPF3-207ENST00000496202 DCAF8Q5TAQ9 597 aa12□□□□□ -0.49
PRPF3-207ENST00000496202 RPAP2Q8IXW5 612 aaPredicted RBP12□□□□□ -0.49
PRPF3-207ENST00000496202 LARGE2Q8N3Y3 721 aa12□□□□□ -0.49
PRPF3-207ENST00000496202 HELBQ8NG08 1087 aaPredicted RBP12□□□□□ -0.49
PRPF3-207ENST00000496202 JDP2Q8WYK2 163 aa12□□□□□ -0.49
PRPF3-207ENST00000496202 PUS3Q9BZE2 481 aaKnown RBP12□□□□□ -0.49
PRPF3-207ENST00000496202 COPRSQ9NQ92 184 aa12□□□□□ -0.49
PRPF3-207ENST00000496202 PA2G4Q9UQ80 394 aaKnown RBP12□□□□□ -0.49
PRPF3-207ENST00000496202 G3BP1Q13283 466 aaKnown RBP eCLIP11.99□□□□□ -0.49
PRPF3-207ENST00000496202 AAMPQ13685 434 aa11.99□□□□□ -0.49
PRPF3-207ENST00000496202 AOC3Q16853 763 aa11.99□□□□□ -0.49
PRPF3-207ENST00000496202 WASHC4Q2M389 1173 aa11.99□□□□□ -0.49
PRPF3-207ENST00000496202 NIM1KQ8IY84 436 aa11.99□□□□□ -0.49
PRPF3-207ENST00000496202 TBC1D16Q8TBP0 767 aa11.99□□□□□ -0.49
PRPF3-207ENST00000496202 SSH3Q8TE77 659 aa11.99□□□□□ -0.49
PRPF3-207ENST00000496202 RTFDC1Q9BY42 306 aaPredicted RBP11.99□□□□□ -0.49
PRPF3-207ENST00000496202 VPS33BQ9H267 617 aa11.99□□□□□ -0.49
PRPF3-207ENST00000496202 POLLQ9UGP5 575 aa11.99□□□□□ -0.49
PRPF3-207ENST00000496202 LEMD3Q9Y2U8 911 aa11.99□□□□□ -0.49
PRPF3-207ENST00000496202 RIPOR2Q9Y4F9 1068 aa11.99□□□□□ -0.49
PRPF3-207ENST00000496202 ZNF804BA4D1E1 1349 aa11.98□□□□□ -0.49
PRPF3-207ENST00000496202 IL15P40933 162 aaPredicted RBP11.98□□□□□ -0.49
PRPF3-207ENST00000496202 IRX6P78412 446 aaPredicted RBP11.98□□□□□ -0.49
PRPF3-207ENST00000496202 POLA2Q14181 598 aa11.98□□□□□ -0.49
PRPF3-207ENST00000496202 GPR101Q96P66 508 aaPredicted RBP11.98□□□□□ -0.49
PRPF3-207ENST00000496202 ZC3H12CQ9C0D7 883 aaKnown RBP11.98□□□□□ -0.49
PRPF3-207ENST00000496202 CEP126Q9P2H0 1117 aa11.98□□□□□ -0.49
PRPF3-207ENST00000496202 MED23Q9ULK4 1368 aa11.97□□□□□ -0.49
PRPF3-207ENST00000496202 RIMBP2O15034 1052 aa11.97□□□□□ -0.49
PRPF3-207ENST00000496202 TAF5LO75529 589 aa11.97□□□□□ -0.49
PRPF3-207ENST00000496202 SURF6O75683 361 aaKnown RBP11.97□□□□□ -0.49
PRPF3-207ENST00000496202 NEFLP07196 543 aa11.97□□□□□ -0.49
PRPF3-207ENST00000496202 VASPP50552 380 aaPredicted RBP11.97□□□□□ -0.49
PRPF3-207ENST00000496202 KIAA2012Q0VF49 1180 aa11.97□□□□□ -0.49
PRPF3-207ENST00000496202 HSP90AB4PQ58FF6 505 aa11.97□□□□□ -0.49
PRPF3-207ENST00000496202 UTRNP46939 3433 aa11.96□□□□□ -0.49
PRPF3-207ENST00000496202 ZC3H4Q9UPT8 1303 aaKnown RBP11.96□□□□□ -0.49
PRPF3-207ENST00000496202 IFIT1P09914 478 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms