RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
COL1A1-209ENST00000495677 C6orf229H3BNL8 230 aa17.63■□□□□ 0.41
COL1A1-209ENST00000495677 RIMBP2O15034 1052 aa17.63■□□□□ 0.41
COL1A1-209ENST00000495677 RBM26Q5T8P6 1007 aaKnown RBP17.63■□□□□ 0.41
COL1A1-209ENST00000495677 ISCA1Q9BUE6 129 aa17.63■□□□□ 0.41
COL1A1-209ENST00000495677 PODXL2Q9NZ53 605 aa17.63■□□□□ 0.41
COL1A1-209ENST00000495677 ZNF280AP59817 542 aaPredicted RBP17.62■□□□□ 0.41
COL1A1-209ENST00000495677 GPSM2P81274 684 aa17.62■□□□□ 0.41
COL1A1-209ENST00000495677 TRIM28Q13263 835 aaKnown RBP17.62■□□□□ 0.41
COL1A1-209ENST00000495677 NOM1Q5C9Z4 860 aaKnown RBP17.62■□□□□ 0.41
COL1A1-209ENST00000495677 AGBL3Q8NEM8 1001 aa17.62■□□□□ 0.41
COL1A1-209ENST00000495677 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
COL1A1-209ENST00000495677 TBC1D16Q8TBP0 767 aa17.62■□□□□ 0.41
COL1A1-209ENST00000495677 ZC3H12CQ9C0D7 883 aaKnown RBP17.62■□□□□ 0.41
COL1A1-209ENST00000495677 GGA3Q9NZ52 723 aa17.62■□□□□ 0.41
COL1A1-209ENST00000495677 COL4A1P02462 1669 aa17.61■□□□□ 0.41
COL1A1-209ENST00000495677 RIPK4P57078 832 aa17.61■□□□□ 0.41
COL1A1-209ENST00000495677 RPS8P62241 208 aaKnown RBP17.61■□□□□ 0.41
COL1A1-209ENST00000495677 ANKRD13DQ6ZTN6 518 aa17.61■□□□□ 0.41
COL1A1-209ENST00000495677 RASAL3Q86YV0 1011 aa17.61■□□□□ 0.41
COL1A1-209ENST00000495677 CDCA5Q96FF9 252 aa17.61■□□□□ 0.41
COL1A1-209ENST00000495677 HPS5Q9UPZ3 1129 aa17.61■□□□□ 0.41
COL1A1-209ENST00000495677 PITPNM2Q9BZ72 1349 aa17.61■□□□□ 0.41
COL1A1-209ENST00000495677 DOK7Q18PE1 504 aa17.6■□□□□ 0.41
COL1A1-209ENST00000495677 FAM89AQ96GI7 184 aa17.6■□□□□ 0.41
COL1A1-209ENST00000495677 LMOD3Q0VAK6 560 aa17.59■□□□□ 0.41
COL1A1-209ENST00000495677 CHL1O00533 1208 aa17.58■□□□□ 0.4
COL1A1-209ENST00000495677 TM4SF4P48230 202 aa17.58■□□□□ 0.4
COL1A1-209ENST00000495677 SCARF1Q14162 830 aa17.58■□□□□ 0.4
COL1A1-209ENST00000495677 GMLQ99445 158 aa17.58■□□□□ 0.4
COL1A1-209ENST00000495677 ASTN2O75129 1339 aaPredicted RBP17.57■□□□□ 0.4
COL1A1-209ENST00000495677 HOXB7P09629 217 aa17.57■□□□□ 0.4
COL1A1-209ENST00000495677 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
COL1A1-209ENST00000495677 ANGEL2Q5VTE6 544 aaKnown RBP17.57■□□□□ 0.4
COL1A1-209ENST00000495677 RSBN1LQ6PCB5 846 aaPredicted RBP17.57■□□□□ 0.4
COL1A1-209ENST00000495677 ZNF646O15015 1829 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-209ENST00000495677 ZNF296Q8WUU4 475 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-209ENST00000495677 CFHR5Q9BXR6 569 aa17.56■□□□□ 0.4
COL1A1-209ENST00000495677 CHPF2Q9P2E5 772 aa17.56■□□□□ 0.4
COL1A1-209ENST00000495677 DBF4Q9UBU7 674 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-209ENST00000495677 HDAC9Q9UKV0 1011 aa17.56■□□□□ 0.4
COL1A1-209ENST00000495677 LAMB1P07942 1786 aa17.56■□□□□ 0.4
COL1A1-209ENST00000495677 MYH3P11055 1940 aa17.55■□□□□ 0.4
COL1A1-209ENST00000495677 G3V3G9 751 aa17.55■□□□□ 0.4
COL1A1-209ENST00000495677 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-209ENST00000495677 HSP90B1P14625 803 aaKnown RBP17.55■□□□□ 0.4
COL1A1-209ENST00000495677 DCAF8Q5TAQ9 597 aa17.55■□□□□ 0.4
COL1A1-209ENST00000495677 ATP5J2-PTCD1G3V325 749 aa17.54■□□□□ 0.4
COL1A1-209ENST00000495677 FBXO46Q6PJ61 603 aaPredicted RBP17.54■□□□□ 0.4
COL1A1-209ENST00000495677 PODNQ7Z5L7 613 aa17.54■□□□□ 0.4
COL1A1-209ENST00000495677 GCC1Q96CN9 775 aa17.54■□□□□ 0.4
COL1A1-209ENST00000495677 MYOZ2Q9NPC6 264 aa17.54■□□□□ 0.4
COL1A1-209ENST00000495677 HYPKQ9NX55 129 aa17.54■□□□□ 0.4
COL1A1-209ENST00000495677 GGA1Q9UJY5 639 aa17.54■□□□□ 0.4
COL1A1-209ENST00000495677 GPR25O00155 361 aa17.53■□□□□ 0.4
COL1A1-209ENST00000495677 TBC1D8O95759 1140 aa17.53■□□□□ 0.4
COL1A1-209ENST00000495677 USP17L8P0C7I0 530 aa17.53■□□□□ 0.4
COL1A1-209ENST00000495677 ZBTB38Q8NAP3 1195 aaPredicted RBP17.53■□□□□ 0.4
COL1A1-209ENST00000495677 ANKIB1Q9P2G1 1089 aa17.53■□□□□ 0.4
COL1A1-209ENST00000495677 RBBP6Q7Z6E9 1792 aaKnown RBP17.53■□□□□ 0.4
COL1A1-209ENST00000495677 UFL1O94874 794 aa17.52■□□□□ 0.4
COL1A1-209ENST00000495677 MMP14P50281 582 aa17.52■□□□□ 0.4
COL1A1-209ENST00000495677 KRT24Q2M2I5 525 aa17.52■□□□□ 0.4
COL1A1-209ENST00000495677 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.4
COL1A1-209ENST00000495677 USP17L3A6NCW0 530 aa17.51■□□□□ 0.39
COL1A1-209ENST00000495677 USP17L4A6NCW7 530 aa17.51■□□□□ 0.39
COL1A1-209ENST00000495677 USP17L1Q7RTZ2 530 aa17.51■□□□□ 0.39
COL1A1-209ENST00000495677 SEC31BQ9NQW1 1179 aa17.51■□□□□ 0.39
COL1A1-209ENST00000495677 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
COL1A1-209ENST00000495677 RTL5Q5HYW3 569 aaPredicted RBP17.5■□□□□ 0.39
COL1A1-209ENST00000495677 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
COL1A1-209ENST00000495677 XDHP47989 1333 aa17.49■□□□□ 0.39
COL1A1-209ENST00000495677 PDE8AO60658 829 aa17.49■□□□□ 0.39
COL1A1-209ENST00000495677 ATP2B4P23634 1241 aa17.49■□□□□ 0.39
COL1A1-209ENST00000495677 CCDC152Q4G0S7 254 aa17.49■□□□□ 0.39
COL1A1-209ENST00000495677 MOB2Q70IA6 237 aa17.49■□□□□ 0.39
COL1A1-209ENST00000495677 ECM29Q5VYK3 1845 aa17.49■□□□□ 0.39
COL1A1-209ENST00000495677 FKTNO75072 461 aa17.48■□□□□ 0.39
COL1A1-209ENST00000495677 PCCAP05165 728 aaPredicted RBP17.48■□□□□ 0.39
COL1A1-209ENST00000495677 SREBF2Q12772 1141 aa17.48■□□□□ 0.39
COL1A1-209ENST00000495677 CCDC191Q8NCU4 936 aa17.48■□□□□ 0.39
COL1A1-209ENST00000495677 TRIM35Q9UPQ4 493 aa17.48■□□□□ 0.39
COL1A1-209ENST00000495677 KIAA0100Q14667 2235 aaKnown RBP17.48■□□□□ 0.39
COL1A1-209ENST00000495677 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
COL1A1-209ENST00000495677 WNT10BO00744 389 aa17.47■□□□□ 0.39
COL1A1-209ENST00000495677 NF2P35240 595 aa17.47■□□□□ 0.39
COL1A1-209ENST00000495677 INHBEP58166 350 aa17.47■□□□□ 0.39
COL1A1-209ENST00000495677 NBPF9Q3BBW0 867 aa17.47■□□□□ 0.39
COL1A1-209ENST00000495677 MYO3BQ8WXR4 1341 aa17.47■□□□□ 0.39
COL1A1-209ENST00000495677 ALDH1A1P00352 501 aa17.46■□□□□ 0.39
COL1A1-209ENST00000495677 INTS3Q68E01 1043 aaKnown RBP17.46■□□□□ 0.39
COL1A1-209ENST00000495677 RIC3Q7Z5B4 369 aa17.46■□□□□ 0.39
COL1A1-209ENST00000495677 ANKRD18AQ8IVF6 992 aa17.46■□□□□ 0.39
COL1A1-209ENST00000495677 OGFOD1Q8N543 542 aa17.46■□□□□ 0.39
COL1A1-209ENST00000495677 MKI67P46013 3256 aaKnown RBP17.46■□□□□ 0.39
COL1A1-209ENST00000495677 MED23Q9ULK4 1368 aa17.45■□□□□ 0.38
COL1A1-209ENST00000495677 LDLRAD1Q5T700 205 aa17.45■□□□□ 0.38
COL1A1-209ENST00000495677 PRAMEF18Q5VWM3 479 aa17.45■□□□□ 0.38
COL1A1-209ENST00000495677 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
COL1A1-209ENST00000495677 ARMC9Q7Z3E5 817 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms