RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 CEP126Q9P2H0 1117 aa18.43■□□□□ 0.54
ACTB-213ENST00000493945 AKAP2Q9Y2D5 859 aa18.43■□□□□ 0.54
ACTB-213ENST00000493945 NOP58Q9Y2X3 529 aaKnown RBP18.43■□□□□ 0.54
ACTB-213ENST00000493945 ATP6V0A2Q9Y487 856 aa18.43■□□□□ 0.54
ACTB-213ENST00000493945 TAF1P21675 1872 aa18.42■□□□□ 0.54
ACTB-213ENST00000493945 DCAF8L1A6NGE4 600 aa18.42■□□□□ 0.54
ACTB-213ENST00000493945 KCNJ4P48050 445 aa18.42■□□□□ 0.54
ACTB-213ENST00000493945 CCDC93Q567U6 631 aa18.42■□□□□ 0.54
ACTB-213ENST00000493945 SP8Q8IXZ3 490 aa18.42■□□□□ 0.54
ACTB-213ENST00000493945 KIF1BPQ96EK5 621 aa18.42■□□□□ 0.54
ACTB-213ENST00000493945 ANKIB1Q9P2G1 1089 aa18.42■□□□□ 0.54
ACTB-213ENST00000493945 RTKN2Q8IZC4 609 aa18.41■□□□□ 0.54
ACTB-213ENST00000493945 SUPT20HQ8NEM7 779 aa18.41■□□□□ 0.54
ACTB-213ENST00000493945 ZNF594Q96JF6 807 aaPredicted RBP18.41■□□□□ 0.54
ACTB-213ENST00000493945 DCTPP1Q9H773 170 aa18.41■□□□□ 0.54
ACTB-213ENST00000493945 XDHP47989 1333 aa18.41■□□□□ 0.54
ACTB-213ENST00000493945 SLX4Q8IY92 1834 aa18.4■□□□□ 0.54
ACTB-213ENST00000493945 CENPQQ7L2Z9 268 aaPredicted RBP18.4■□□□□ 0.54
ACTB-213ENST00000493945 SIRT2Q8IXJ6 389 aa18.4■□□□□ 0.54
ACTB-213ENST00000493945 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
ACTB-213ENST00000493945 PA2G4Q9UQ80 394 aaKnown RBP18.4■□□□□ 0.54
ACTB-213ENST00000493945 BCS1LQ9Y276 419 aa18.4■□□□□ 0.54
ACTB-213ENST00000493945 EXOC6BQ9Y2D4 811 aa18.4■□□□□ 0.54
ACTB-213ENST00000493945 CLASRPQ8N2M8 674 aaKnown RBP18.39■□□□□ 0.53
ACTB-213ENST00000493945 NLGN2Q8NFZ4 835 aa18.39■□□□□ 0.53
ACTB-213ENST00000493945 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
ACTB-213ENST00000493945 A0A1B0GUL6 1792 aa18.38■□□□□ 0.53
ACTB-213ENST00000493945 KCNA3P22001 575 aa18.38■□□□□ 0.53
ACTB-213ENST00000493945 ATP2B4P23634 1241 aa18.38■□□□□ 0.53
ACTB-213ENST00000493945 CHRNDQ07001 517 aa18.38■□□□□ 0.53
ACTB-213ENST00000493945 PUM3Q15397 648 aaKnown RBP18.38■□□□□ 0.53
ACTB-213ENST00000493945 DPP8Q6V1X1 898 aaPredicted RBP18.38■□□□□ 0.53
ACTB-213ENST00000493945 MPNDQ8N594 471 aa18.38■□□□□ 0.53
ACTB-213ENST00000493945 EYA3Q99504 573 aa18.38■□□□□ 0.53
ACTB-213ENST00000493945 GGA1Q9UJY5 639 aa18.38■□□□□ 0.53
ACTB-213ENST00000493945 MINPP1Q9UNW1 487 aa18.38■□□□□ 0.53
ACTB-213ENST00000493945 LEMD3Q9Y2U8 911 aa18.38■□□□□ 0.53
ACTB-213ENST00000493945 IFIT1P09914 478 aaKnown RBP18.37■□□□□ 0.53
ACTB-213ENST00000493945 SLC5A1P13866 664 aa18.37■□□□□ 0.53
ACTB-213ENST00000493945 NSFL1CQ9UNZ2 370 aaKnown RBP18.37■□□□□ 0.53
ACTB-213ENST00000493945 RIPOR2Q9Y4F9 1068 aa18.37■□□□□ 0.53
ACTB-213ENST00000493945 C21orf2O43822 256 aa18.36■□□□□ 0.53
ACTB-213ENST00000493945 PDE8BO95263 885 aa18.36■□□□□ 0.53
ACTB-213ENST00000493945 UBE4AQ14139 1066 aa18.36■□□□□ 0.53
ACTB-213ENST00000493945 LRRC24Q50LG9 513 aa18.36■□□□□ 0.53
ACTB-213ENST00000493945 GPATCH3Q96I76 525 aa18.36■□□□□ 0.53
ACTB-213ENST00000493945 GPR108Q9NPR9 543 aa18.36■□□□□ 0.53
ACTB-213ENST00000493945 PODXL2Q9NZ53 605 aa18.36■□□□□ 0.53
ACTB-213ENST00000493945 APBB1O00213 710 aa18.35■□□□□ 0.53
ACTB-213ENST00000493945 ATP2B3Q16720 1220 aa18.35■□□□□ 0.53
ACTB-213ENST00000493945 SMC5Q8IY18 1101 aa18.35■□□□□ 0.53
ACTB-213ENST00000493945 PELP1Q8IZL8 1130 aaKnown RBP18.35■□□□□ 0.53
ACTB-213ENST00000493945 RHPN1Q8TCX5 695 aa18.35■□□□□ 0.53
ACTB-213ENST00000493945 PUS3Q9BZE2 481 aaKnown RBP18.35■□□□□ 0.53
ACTB-213ENST00000493945 UFL1O94874 794 aa18.34■□□□□ 0.53
ACTB-213ENST00000493945 ATG9AQ7Z3C6 839 aa18.34■□□□□ 0.53
ACTB-213ENST00000493945 LPIN2Q92539 896 aa18.34■□□□□ 0.53
ACTB-213ENST00000493945 VPS33BQ9H267 617 aa18.34■□□□□ 0.53
ACTB-213ENST00000493945 TAOK3Q9H2K8 898 aa18.34■□□□□ 0.53
ACTB-213ENST00000493945 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
ACTB-213ENST00000493945 ZNF804BA4D1E1 1349 aa18.33■□□□□ 0.53
ACTB-213ENST00000493945 ARAP2Q8WZ64 1704 aa18.33■□□□□ 0.52
ACTB-213ENST00000493945 G3V3G9 751 aa18.33■□□□□ 0.52
ACTB-213ENST00000493945 C6orf229H3BNL8 230 aa18.33■□□□□ 0.52
ACTB-213ENST00000493945 GRIN3BO60391 1043 aa18.33■□□□□ 0.52
ACTB-213ENST00000493945 IFIT2P09913 472 aaKnown RBP18.33■□□□□ 0.52
ACTB-213ENST00000493945 GPR162Q16538 588 aa18.33■□□□□ 0.52
ACTB-213ENST00000493945 CAVIN4Q5BKX8 364 aa18.33■□□□□ 0.52
ACTB-213ENST00000493945 GORABQ5T7V8 394 aa18.33■□□□□ 0.52
ACTB-213ENST00000493945 DCAF8Q5TAQ9 597 aa18.33■□□□□ 0.52
ACTB-213ENST00000493945 PSMD1Q99460 953 aa18.33■□□□□ 0.52
ACTB-213ENST00000493945 ZNF609O15014 1411 aa18.32■□□□□ 0.52
ACTB-213ENST00000493945 FKBP4Q02790 459 aaKnown RBP eCLIP18.32■□□□□ 0.52
ACTB-213ENST00000493945 TFCP2Q12800 502 aa18.32■□□□□ 0.52
ACTB-213ENST00000493945 ANKRD45Q5TZF3 282 aa18.32■□□□□ 0.52
ACTB-213ENST00000493945 VPS37DQ86XT2 251 aa18.32■□□□□ 0.52
ACTB-213ENST00000493945 FER1L6Q2WGJ9 1857 aa18.32■□□□□ 0.52
ACTB-213ENST00000493945 LTBP1Q14766 1721 aa18.32■□□□□ 0.52
ACTB-213ENST00000493945 MED23Q9ULK4 1368 aa18.31■□□□□ 0.52
ACTB-213ENST00000493945 LTBP3Q9NS15 1303 aa18.31■□□□□ 0.52
ACTB-213ENST00000493945 GPSM2P81274 684 aa18.31■□□□□ 0.52
ACTB-213ENST00000493945 TNNI3KQ59H18 835 aa18.31■□□□□ 0.52
ACTB-213ENST00000493945 ZNF804AQ7Z570 1209 aa18.31■□□□□ 0.52
ACTB-213ENST00000493945 AACSQ86V21 672 aa18.31■□□□□ 0.52
ACTB-213ENST00000493945 C7orf43Q8WVR3 580 aa18.31■□□□□ 0.52
ACTB-213ENST00000493945 ZC3H12CQ9C0D7 883 aaKnown RBP18.31■□□□□ 0.52
ACTB-213ENST00000493945 GNL3LQ9NVN8 582 aaKnown RBP18.31■□□□□ 0.52
ACTB-213ENST00000493945 GTF3C3Q9Y5Q9 886 aa18.31■□□□□ 0.52
ACTB-213ENST00000493945 FPGT-TNNI3KV9GXZ4 949 aa18.31■□□□□ 0.52
ACTB-213ENST00000493945 COL4A1P02462 1669 aa18.31■□□□□ 0.52
ACTB-213ENST00000493945 A0A1B0GUL7 405 aa18.3■□□□□ 0.52
ACTB-213ENST00000493945 TAF5LO75529 589 aa18.3■□□□□ 0.52
ACTB-213ENST00000493945 SASH1O94885 1247 aa18.3■□□□□ 0.52
ACTB-213ENST00000493945 IGHDP01880 384 aa18.3■□□□□ 0.52
ACTB-213ENST00000493945 B4GALNT3Q6L9W6 998 aa18.3■□□□□ 0.52
ACTB-213ENST00000493945 VGLL2Q8N8G2 317 aa18.3■□□□□ 0.52
ACTB-213ENST00000493945 HELBQ8NG08 1087 aaPredicted RBP18.3■□□□□ 0.52
ACTB-213ENST00000493945 TBC1D16Q8TBP0 767 aa18.3■□□□□ 0.52
ACTB-213ENST00000493945 NEUROD6Q96NK8 337 aa18.3■□□□□ 0.52
ACTB-213ENST00000493945 RTFDC1Q9BY42 306 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms