RNA–Protein interactions for RNA: ENST00000493502.3

SSPO-210, Transcript of SCO-spondin, humanhuman

TSL 5

Gene SSPO, Length 646 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-210ENST00000493502 SF3B3Q15393 1217 aaKnown RBP18.32■□□□□ 0.52
SSPO-210ENST00000493502 NECTIN2Q92692 538 aa18.32■□□□□ 0.52
SSPO-210ENST00000493502 HPS5Q9UPZ3 1129 aa18.32■□□□□ 0.52
SSPO-210ENST00000493502 ZNF609O15014 1411 aa18.32■□□□□ 0.52
SSPO-210ENST00000493502 HTTP42858 3142 aa18.32■□□□□ 0.52
SSPO-210ENST00000493502 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
SSPO-210ENST00000493502 C6orf229H3BNL8 230 aa18.31■□□□□ 0.52
SSPO-210ENST00000493502 SULF1Q8IWU6 871 aa18.31■□□□□ 0.52
SSPO-210ENST00000493502 PSME4Q14997 1843 aa18.3■□□□□ 0.52
SSPO-210ENST00000493502 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
SSPO-210ENST00000493502 TBC1D16Q8TBP0 767 aa18.3■□□□□ 0.52
SSPO-210ENST00000493502 BABAM1Q9NWV8 329 aa18.3■□□□□ 0.52
SSPO-210ENST00000493502 KRT24Q2M2I5 525 aa18.29■□□□□ 0.52
SSPO-210ENST00000493502 REM2Q8IYK8 340 aaPredicted RBP18.29■□□□□ 0.52
SSPO-210ENST00000493502 FAM89AQ96GI7 184 aa18.29■□□□□ 0.52
SSPO-210ENST00000493502 EYA3Q99504 573 aa18.29■□□□□ 0.52
SSPO-210ENST00000493502 ISCA1Q9BUE6 129 aa18.29■□□□□ 0.52
SSPO-210ENST00000493502 BRCA2P51587 3418 aa18.28■□□□□ 0.52
SSPO-210ENST00000493502 ZNF280AP59817 542 aaPredicted RBP18.28■□□□□ 0.52
SSPO-210ENST00000493502 ANGEL2Q5VTE6 544 aaKnown RBP18.28■□□□□ 0.52
SSPO-210ENST00000493502 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
SSPO-210ENST00000493502 CENPFP49454 3210 aa18.27■□□□□ 0.52
SSPO-210ENST00000493502 RIPK4P57078 832 aa18.26■□□□□ 0.51
SSPO-210ENST00000493502 FKBP1BP68106 108 aa18.26■□□□□ 0.51
SSPO-210ENST00000493502 SCARF1Q14162 830 aa18.26■□□□□ 0.51
SSPO-210ENST00000493502 MOB2Q70IA6 237 aa18.26■□□□□ 0.51
SSPO-210ENST00000493502 PLBD2Q8NHP8 589 aa18.26■□□□□ 0.51
SSPO-210ENST00000493502 ZNF296Q8WUU4 475 aaPredicted RBP18.26■□□□□ 0.51
SSPO-210ENST00000493502 PODXL2Q9NZ53 605 aa18.26■□□□□ 0.51
SSPO-210ENST00000493502 ATP5J2-PTCD1G3V325 749 aa18.25■□□□□ 0.51
SSPO-210ENST00000493502 PKN2Q16513 984 aaKnown RBP18.25■□□□□ 0.51
SSPO-210ENST00000493502 RSBN1LQ6PCB5 846 aaPredicted RBP18.25■□□□□ 0.51
SSPO-210ENST00000493502 GMLQ99445 158 aa18.25■□□□□ 0.51
SSPO-210ENST00000493502 PNNQ9H307 717 aaKnown RBP18.25■□□□□ 0.51
SSPO-210ENST00000493502 TBC1D8O95759 1140 aa18.24■□□□□ 0.51
SSPO-210ENST00000493502 RPS8P62241 208 aaKnown RBP18.24■□□□□ 0.51
SSPO-210ENST00000493502 RTL5Q5HYW3 569 aaPredicted RBP18.24■□□□□ 0.51
SSPO-210ENST00000493502 ZC3H12CQ9C0D7 883 aaKnown RBP18.24■□□□□ 0.51
SSPO-210ENST00000493502 PITPNM2Q9BZ72 1349 aa18.23■□□□□ 0.51
SSPO-210ENST00000493502 ZNF646O15015 1829 aaPredicted RBP18.23■□□□□ 0.51
SSPO-210ENST00000493502 IRS4O14654 1257 aaPredicted RBP18.23■□□□□ 0.51
SSPO-210ENST00000493502 UFL1O94874 794 aa18.23■□□□□ 0.51
SSPO-210ENST00000493502 ANKRD13DQ6ZTN6 518 aa18.23■□□□□ 0.51
SSPO-210ENST00000493502 AGBL3Q8NEM8 1001 aa18.23■□□□□ 0.51
SSPO-210ENST00000493502 SCAF8Q9UPN6 1271 aaKnown RBP18.23■□□□□ 0.51
SSPO-210ENST00000493502 TMPOP42166 694 aaKnown RBP18.22■□□□□ 0.51
SSPO-210ENST00000493502 MYOZ2Q9NPC6 264 aa18.22■□□□□ 0.51
SSPO-210ENST00000493502 SEC31BQ9NQW1 1179 aa18.22■□□□□ 0.51
SSPO-210ENST00000493502 HDAC9Q9UKV0 1011 aa18.22■□□□□ 0.51
SSPO-210ENST00000493502 UBE2Q2LH0YL09 131 aa18.21■□□□□ 0.51
SSPO-210ENST00000493502 CHL1O00533 1208 aa18.21■□□□□ 0.51
SSPO-210ENST00000493502 TRIM28Q13263 835 aaKnown RBP18.21■□□□□ 0.51
SSPO-210ENST00000493502 NOM1Q5C9Z4 860 aaKnown RBP18.21■□□□□ 0.51
SSPO-210ENST00000493502 GPR25O00155 361 aa18.2■□□□□ 0.5
SSPO-210ENST00000493502 USP17L8P0C7I0 530 aa18.2■□□□□ 0.5
SSPO-210ENST00000493502 TM4SF4P48230 202 aa18.2■□□□□ 0.5
SSPO-210ENST00000493502 HDGFL1Q5TGJ6 251 aa18.2■□□□□ 0.5
SSPO-210ENST00000493502 GGA1Q9UJY5 639 aa18.2■□□□□ 0.5
SSPO-210ENST00000493502 LMOD3Q0VAK6 560 aa18.19■□□□□ 0.5
SSPO-210ENST00000493502 PRAMEF18Q5VWM3 479 aa18.19■□□□□ 0.5
SSPO-210ENST00000493502 FBXO46Q6PJ61 603 aaPredicted RBP18.19■□□□□ 0.5
SSPO-210ENST00000493502 ANKIB1Q9P2G1 1089 aa18.19■□□□□ 0.5
SSPO-210ENST00000493502 G3V3G9 751 aa18.18■□□□□ 0.5
SSPO-210ENST00000493502 DCAF8Q5TAQ9 597 aa18.18■□□□□ 0.5
SSPO-210ENST00000493502 DBF4Q9UBU7 674 aaPredicted RBP18.18■□□□□ 0.5
SSPO-210ENST00000493502 HOXB7P09629 217 aa18.17■□□□□ 0.5
SSPO-210ENST00000493502 NBPF9Q3BBW0 867 aa18.17■□□□□ 0.5
SSPO-210ENST00000493502 ZBTB38Q8NAP3 1195 aaPredicted RBP18.17■□□□□ 0.5
SSPO-210ENST00000493502 CFHR5Q9BXR6 569 aa18.17■□□□□ 0.5
SSPO-210ENST00000493502 R3HDMLQ9H3Y0 253 aa18.17■□□□□ 0.5
SSPO-210ENST00000493502 XDHP47989 1333 aa18.16■□□□□ 0.5
SSPO-210ENST00000493502 USP17L3A6NCW0 530 aa18.15■□□□□ 0.5
SSPO-210ENST00000493502 USP17L4A6NCW7 530 aa18.15■□□□□ 0.5
SSPO-210ENST00000493502 WTIPA6NIX2 430 aaPredicted RBP18.15■□□□□ 0.5
SSPO-210ENST00000493502 MKRN3Q13064 507 aaKnown RBP18.15■□□□□ 0.5
SSPO-210ENST00000493502 USP17L1Q7RTZ2 530 aa18.15■□□□□ 0.5
SSPO-210ENST00000493502 PODNQ7Z5L7 613 aa18.15■□□□□ 0.5
SSPO-210ENST00000493502 HYPKQ9NX55 129 aa18.15■□□□□ 0.5
SSPO-210ENST00000493502 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
SSPO-210ENST00000493502 FKTNO75072 461 aa18.14■□□□□ 0.49
SSPO-210ENST00000493502 GCC1Q96CN9 775 aa18.14■□□□□ 0.49
SSPO-210ENST00000493502 MXD3Q9BW11 206 aa18.14■□□□□ 0.49
SSPO-210ENST00000493502 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.49
SSPO-210ENST00000493502 LAMB1P07942 1786 aa18.13■□□□□ 0.49
SSPO-210ENST00000493502 WNT10BO00744 389 aa18.13■□□□□ 0.49
SSPO-210ENST00000493502 SREBF2Q12772 1141 aa18.13■□□□□ 0.49
SSPO-210ENST00000493502 TTLL12Q14166 644 aaPredicted RBP18.13■□□□□ 0.49
SSPO-210ENST00000493502 NEUROD2Q15784 382 aa18.13■□□□□ 0.49
SSPO-210ENST00000493502 CCDC152Q4G0S7 254 aa18.13■□□□□ 0.49
SSPO-210ENST00000493502 DACT2Q5SW24 774 aa18.13■□□□□ 0.49
SSPO-210ENST00000493502 CCDC85AQ96PX6 553 aaPredicted RBP18.13■□□□□ 0.49
SSPO-210ENST00000493502 MED23Q9ULK4 1368 aa18.13■□□□□ 0.49
SSPO-210ENST00000493502 RBBP6Q7Z6E9 1792 aaKnown RBP18.12■□□□□ 0.49
SSPO-210ENST00000493502 ATP2B4P23634 1241 aa18.12■□□□□ 0.49
SSPO-210ENST00000493502 PTPN12Q05209 780 aaKnown RBP18.12■□□□□ 0.49
SSPO-210ENST00000493502 HABP4Q5JVS0 413 aaKnown RBP18.12■□□□□ 0.49
SSPO-210ENST00000493502 SPEF2Q9C093 1822 aa18.12■□□□□ 0.49
SSPO-210ENST00000493502 PDE8AO60658 829 aa18.11■□□□□ 0.49
SSPO-210ENST00000493502 PCCAP05165 728 aaPredicted RBP18.11■□□□□ 0.49
SSPO-210ENST00000493502 DUSP27Q5VZP5 1158 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms