RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 PCCAP05165 728 aaPredicted RBP11.4□□□□□ -0.58
TM4SF1-203ENST00000493298 GRAPQ13588 217 aa11.4□□□□□ -0.58
TM4SF1-203ENST00000493298 CEP85Q6P2H3 762 aa11.4□□□□□ -0.58
TM4SF1-203ENST00000493298 SP8Q8IXZ3 490 aa11.4□□□□□ -0.58
TM4SF1-203ENST00000493298 GRAPLQ8TC17 118 aaPredicted RBP11.4□□□□□ -0.58
TM4SF1-203ENST00000493298 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
TM4SF1-203ENST00000493298 CDHR2Q9BYE9 1310 aa11.39□□□□□ -0.59
TM4SF1-203ENST00000493298 IRS4O14654 1257 aaPredicted RBP11.39□□□□□ -0.59
TM4SF1-203ENST00000493298 BBOX1O75936 387 aa11.39□□□□□ -0.59
TM4SF1-203ENST00000493298 VEGFAP15692 232 aaPredicted RBP11.39□□□□□ -0.59
TM4SF1-203ENST00000493298 FOXO4P98177 505 aa11.39□□□□□ -0.59
TM4SF1-203ENST00000493298 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
TM4SF1-203ENST00000493298 SEC31BQ9NQW1 1179 aa11.39□□□□□ -0.59
TM4SF1-203ENST00000493298 LRRFIP2Q9Y608 721 aaKnown RBP11.39□□□□□ -0.59
TM4SF1-203ENST00000493298 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.39□□□□□ -0.59
TM4SF1-203ENST00000493298 GRM8O00222 908 aa11.38□□□□□ -0.59
TM4SF1-203ENST00000493298 DDX58O95786 925 aaKnown RBP11.38□□□□□ -0.59
TM4SF1-203ENST00000493298 FSTL1Q12841 308 aa11.38□□□□□ -0.59
TM4SF1-203ENST00000493298 HDAC1Q13547 482 aaPredicted RBP11.38□□□□□ -0.59
TM4SF1-203ENST00000493298 RTL9Q8NET4 1388 aa11.38□□□□□ -0.59
TM4SF1-203ENST00000493298 YDJCA8MPS7 323 aa11.37□□□□□ -0.59
TM4SF1-203ENST00000493298 RFX5P48382 616 aaPredicted RBP11.37□□□□□ -0.59
TM4SF1-203ENST00000493298 SCNN1DP51172 638 aa11.37□□□□□ -0.59
TM4SF1-203ENST00000493298 HTRA3P83110 453 aa11.37□□□□□ -0.59
TM4SF1-203ENST00000493298 ATP8B2P98198 1209 aa11.37□□□□□ -0.59
TM4SF1-203ENST00000493298 POLA2Q14181 598 aa11.37□□□□□ -0.59
TM4SF1-203ENST00000493298 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
TM4SF1-203ENST00000493298 TAF1DQ9H5J8 278 aaPredicted RBP11.37□□□□□ -0.59
TM4SF1-203ENST00000493298 CWC25Q9NXE8 425 aaPredicted RBP11.37□□□□□ -0.59
TM4SF1-203ENST00000493298 WTIPA6NIX2 430 aaPredicted RBP11.36□□□□□ -0.59
TM4SF1-203ENST00000493298 KIAA2012Q0VF49 1180 aa11.36□□□□□ -0.59
TM4SF1-203ENST00000493298 MTX1Q13505 466 aa11.36□□□□□ -0.59
TM4SF1-203ENST00000493298 AAMPQ13685 434 aa11.36□□□□□ -0.59
TM4SF1-203ENST00000493298 AOC3Q16853 763 aa11.36□□□□□ -0.59
TM4SF1-203ENST00000493298 RABL6Q3YEC7 729 aaPredicted RBP11.36□□□□□ -0.59
TM4SF1-203ENST00000493298 SMC5Q8IY18 1101 aa11.36□□□□□ -0.59
TM4SF1-203ENST00000493298 GPC2Q8N158 579 aa11.36□□□□□ -0.59
TM4SF1-203ENST00000493298 TTLL11Q8NHH1 800 aa11.36□□□□□ -0.59
TM4SF1-203ENST00000493298 SSH3Q8TE77 659 aa11.36□□□□□ -0.59
TM4SF1-203ENST00000493298 POLLQ9UGP5 575 aa11.36□□□□□ -0.59
TM4SF1-203ENST00000493298 PASKQ96RG2 1323 aa11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 PDE8AO60658 829 aa11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 ITGBL1O95965 494 aaPredicted RBP11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 GNAI2P04899 355 aa11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 GPSM2P81274 684 aa11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 DPY19L2Q6NUT2 758 aa11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 DDX46Q7L014 1031 aaKnown RBP11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 UBE3BQ7Z3V4 1068 aa11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 PLA2G12BQ9BX93 195 aa11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 VPS33BQ9H267 617 aa11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 BICC1Q9H694 974 aaKnown RBP11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 PODXL2Q9NZ53 605 aa11.35□□□□□ -0.59
TM4SF1-203ENST00000493298 CSF1RP07333 972 aa11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 PDE4AP27815 886 aa11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 CTSWP56202 376 aa11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 RPS8P62241 208 aaKnown RBP11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 CXCL9Q07325 125 aa11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 TMC4Q7Z404 712 aa11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 SMC1BQ8NDV3 1235 aa11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 CCDC136Q96JN2 1154 aa11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 DCTPP1Q9H773 170 aa11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 THSD7BQ9C0I4 1608 aa11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 ZNF609O15014 1411 aa11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 IRS2Q9Y4H2 1338 aa11.34□□□□□ -0.59
TM4SF1-203ENST00000493298 GNAI3P08754 354 aa11.33□□□□□ -0.6
TM4SF1-203ENST00000493298 UBTFL1P0CB47 393 aaPredicted RBP11.33□□□□□ -0.6
TM4SF1-203ENST00000493298 APLP1P51693 650 aa11.33□□□□□ -0.6
TM4SF1-203ENST00000493298 RPAP2Q8IXW5 612 aaPredicted RBP11.33□□□□□ -0.6
TM4SF1-203ENST00000493298 LARGE2Q8N3Y3 721 aa11.33□□□□□ -0.6
TM4SF1-203ENST00000493298 MPNDQ8N594 471 aa11.33□□□□□ -0.6
TM4SF1-203ENST00000493298 GREM2Q9H772 168 aa11.33□□□□□ -0.6
TM4SF1-203ENST00000493298 KCNQ5Q9NR82 932 aa11.33□□□□□ -0.6
TM4SF1-203ENST00000493298 SHTN1A0MZ66 631 aa11.32□□□□□ -0.6
TM4SF1-203ENST00000493298 PPIP5K2O43314 1243 aa11.32□□□□□ -0.6
TM4SF1-203ENST00000493298 EPS15P42566 896 aa11.32□□□□□ -0.6
TM4SF1-203ENST00000493298 DPP8Q6V1X1 898 aaPredicted RBP11.32□□□□□ -0.6
TM4SF1-203ENST00000493298 KLHDC4Q8TBB5 520 aa11.32□□□□□ -0.6
TM4SF1-203ENST00000493298 TBC1D16Q8TBP0 767 aa11.32□□□□□ -0.6
TM4SF1-203ENST00000493298 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
TM4SF1-203ENST00000493298 C9orf78Q9NZ63 289 aaPredicted RBP11.32□□□□□ -0.6
TM4SF1-203ENST00000493298 EPHX2P34913 555 aa11.31□□□□□ -0.6
TM4SF1-203ENST00000493298 NEXNQ0ZGT2 675 aa11.31□□□□□ -0.6
TM4SF1-203ENST00000493298 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
TM4SF1-203ENST00000493298 JMYQ8N9B5 988 aa11.31□□□□□ -0.6
TM4SF1-203ENST00000493298 JDP2Q8WYK2 163 aa11.31□□□□□ -0.6
TM4SF1-203ENST00000493298 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
TM4SF1-203ENST00000493298 ZNRF3Q9ULT6 936 aa11.31□□□□□ -0.6
TM4SF1-203ENST00000493298 PA2G4Q9UQ80 394 aaKnown RBP11.31□□□□□ -0.6
TM4SF1-203ENST00000493298 NOP58Q9Y2X3 529 aaKnown RBP11.31□□□□□ -0.6
TM4SF1-203ENST00000493298 ECM29Q5VYK3 1845 aa11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 ARAP2Q8WZ64 1704 aa11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 IQCA1LA6NCM1 817 aa11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 HIRAP54198 1017 aaPredicted RBP11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 PTPN12Q05209 780 aaKnown RBP11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 CCDC152Q4G0S7 254 aa11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 LMBR1LQ6UX01 489 aa11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 CENPQQ7L2Z9 268 aaPredicted RBP11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 LDHDQ86WU2 507 aa11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 C16orf71Q8IYS4 520 aaPredicted RBP11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 OTUD7AQ8TE49 926 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms