RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 TMX4Q9H1E5 349 aaPredicted RBP18.03■□□□□ 0.48
SRGAP3-208ENST00000490348 PODXL2Q9NZ53 605 aa18.03■□□□□ 0.48
SRGAP3-208ENST00000490348 IARSP41252 1262 aaKnown RBP18.02■□□□□ 0.48
SRGAP3-208ENST00000490348 RRP1P56182 461 aaKnown RBP18.02■□□□□ 0.48
SRGAP3-208ENST00000490348 PDE3AQ14432 1141 aa18.02■□□□□ 0.48
SRGAP3-208ENST00000490348 TBC1D16Q8TBP0 767 aa18.02■□□□□ 0.48
SRGAP3-208ENST00000490348 GPR101Q96P66 508 aaPredicted RBP18.02■□□□□ 0.48
SRGAP3-208ENST00000490348 MPHOSPH8Q99549 860 aa18.02■□□□□ 0.48
SRGAP3-208ENST00000490348 GNAI2P04899 355 aa18.01■□□□□ 0.47
SRGAP3-208ENST00000490348 MS4A1P11836 297 aa18.01■□□□□ 0.47
SRGAP3-208ENST00000490348 PUS3Q9BZE2 481 aaKnown RBP18.01■□□□□ 0.47
SRGAP3-208ENST00000490348 C1orf115Q9H7X2 142 aa18.01■□□□□ 0.47
SRGAP3-208ENST00000490348 DICER1Q9UPY3 1922 aaKnown RBP18.01■□□□□ 0.47
SRGAP3-208ENST00000490348 TIAM2Q8IVF5 1701 aa18■□□□□ 0.47
SRGAP3-208ENST00000490348 MTX1Q13505 466 aa18■□□□□ 0.47
SRGAP3-208ENST00000490348 AOC3Q16853 763 aa18■□□□□ 0.47
SRGAP3-208ENST00000490348 GOLGA6L2Q8N9W4 650 aaPredicted RBP18■□□□□ 0.47
SRGAP3-208ENST00000490348 ANKIB1Q9P2G1 1089 aa18■□□□□ 0.47
SRGAP3-208ENST00000490348 XDHP47989 1333 aa18■□□□□ 0.47
SRGAP3-208ENST00000490348 PTPN12Q05209 780 aaKnown RBP18■□□□□ 0.47
SRGAP3-208ENST00000490348 CHRNDQ07001 517 aa18■□□□□ 0.47
SRGAP3-208ENST00000490348 TAF7LQ5H9L4 462 aa18■□□□□ 0.47
SRGAP3-208ENST00000490348 LDHAL6AQ6ZMR3 332 aa18■□□□□ 0.47
SRGAP3-208ENST00000490348 HDAC5Q9UQL6 1122 aa18■□□□□ 0.47
SRGAP3-208ENST00000490348 UFL1O94874 794 aa17.99■□□□□ 0.47
SRGAP3-208ENST00000490348 LRRC24Q50LG9 513 aa17.99■□□□□ 0.47
SRGAP3-208ENST00000490348 RIPOR2Q9Y4F9 1068 aa17.99■□□□□ 0.47
SRGAP3-208ENST00000490348 A0A1B0GUL6 1792 aa17.99■□□□□ 0.47
SRGAP3-208ENST00000490348 PNMA6EA0A0J9YXQ4 647 aa17.98■□□□□ 0.47
SRGAP3-208ENST00000490348 C6orf229H3BNL8 230 aa17.98■□□□□ 0.47
SRGAP3-208ENST00000490348 SNAP23O00161 211 aa17.98■□□□□ 0.47
SRGAP3-208ENST00000490348 PPIP5K2O43314 1243 aa17.98■□□□□ 0.47
SRGAP3-208ENST00000490348 KIAA2012Q0VF49 1180 aa17.98■□□□□ 0.47
SRGAP3-208ENST00000490348 SUPT20HQ8NEM7 779 aa17.98■□□□□ 0.47
SRGAP3-208ENST00000490348 HELBQ8NG08 1087 aaPredicted RBP17.98■□□□□ 0.47
SRGAP3-208ENST00000490348 GGA1Q9UJY5 639 aa17.98■□□□□ 0.47
SRGAP3-208ENST00000490348 SRGAP3O43295 1099 aa17.97■□□□□ 0.47
SRGAP3-208ENST00000490348 TAF5LO75529 589 aa17.97■□□□□ 0.47
SRGAP3-208ENST00000490348 LARGE2Q8N3Y3 721 aa17.97■□□□□ 0.47
SRGAP3-208ENST00000490348 CNNM1Q9NRU3 951 aa17.97■□□□□ 0.47
SRGAP3-208ENST00000490348 ZBTB40Q9NUA8 1239 aa17.97■□□□□ 0.47
SRGAP3-208ENST00000490348 DDX19BQ9UMR2 479 aa17.97■□□□□ 0.47
SRGAP3-208ENST00000490348 PA2G4Q9UQ80 394 aaKnown RBP17.97■□□□□ 0.47
SRGAP3-208ENST00000490348 ZC3H4Q9UPT8 1303 aaKnown RBP17.97■□□□□ 0.47
SRGAP3-208ENST00000490348 KLRK1P26718 216 aa17.96■□□□□ 0.47
SRGAP3-208ENST00000490348 WASHC4Q2M389 1173 aa17.96■□□□□ 0.47
SRGAP3-208ENST00000490348 ZNF784Q8NCA9 323 aaPredicted RBP17.96■□□□□ 0.47
SRGAP3-208ENST00000490348 VPS33BQ9H267 617 aa17.96■□□□□ 0.47
SRGAP3-208ENST00000490348 ZNF541Q9H0D2 1346 aa17.96■□□□□ 0.46
SRGAP3-208ENST00000490348 IRS2Q9Y4H2 1338 aa17.96■□□□□ 0.46
SRGAP3-208ENST00000490348 FZD9O00144 591 aa17.96■□□□□ 0.46
SRGAP3-208ENST00000490348 RIMBP2O15034 1052 aa17.96■□□□□ 0.46
SRGAP3-208ENST00000490348 ATP2B4P23634 1241 aa17.96■□□□□ 0.46
SRGAP3-208ENST00000490348 ATG9AQ7Z3C6 839 aa17.96■□□□□ 0.46
SRGAP3-208ENST00000490348 ANKRD2Q9GZV1 360 aa17.96■□□□□ 0.46
SRGAP3-208ENST00000490348 TXNRD3Q86VQ6 643 aa17.95■□□□□ 0.46
SRGAP3-208ENST00000490348 VGLL2Q8N8G2 317 aa17.95■□□□□ 0.46
SRGAP3-208ENST00000490348 COPRSQ9NQ92 184 aa17.95■□□□□ 0.46
SRGAP3-208ENST00000490348 ZNF804BA4D1E1 1349 aa17.94■□□□□ 0.46
SRGAP3-208ENST00000490348 EYA2O00167 538 aa17.94■□□□□ 0.46
SRGAP3-208ENST00000490348 POLA2Q14181 598 aa17.94■□□□□ 0.46
SRGAP3-208ENST00000490348 CEP85Q6P2H3 762 aa17.94■□□□□ 0.46
SRGAP3-208ENST00000490348 ZNF526Q8TF50 670 aaPredicted RBP17.94■□□□□ 0.46
SRGAP3-208ENST00000490348 SIL1Q9H173 461 aa17.94■□□□□ 0.46
SRGAP3-208ENST00000490348 LEMD3Q9Y2U8 911 aa17.94■□□□□ 0.46
SRGAP3-208ENST00000490348 MROH5Q6ZUA9 1318 aa17.93■□□□□ 0.46
SRGAP3-208ENST00000490348 YDJCA8MPS7 323 aa17.93■□□□□ 0.46
SRGAP3-208ENST00000490348 ATP8B2P98198 1209 aa17.93■□□□□ 0.46
SRGAP3-208ENST00000490348 NIM1KQ8IY84 436 aa17.93■□□□□ 0.46
SRGAP3-208ENST00000490348 JDP2Q8WYK2 163 aa17.93■□□□□ 0.46
SRGAP3-208ENST00000490348 EYA3Q99504 573 aa17.93■□□□□ 0.46
SRGAP3-208ENST00000490348 MED23Q9ULK4 1368 aa17.93■□□□□ 0.46
SRGAP3-208ENST00000490348 DOK7Q18PE1 504 aa17.92■□□□□ 0.46
SRGAP3-208ENST00000490348 SSH3Q8TE77 659 aa17.92■□□□□ 0.46
SRGAP3-208ENST00000490348 ZC3H12CQ9C0D7 883 aaKnown RBP17.92■□□□□ 0.46
SRGAP3-208ENST00000490348 DBNDD1Q9H9R9 158 aa17.92■□□□□ 0.46
SRGAP3-208ENST00000490348 GLTPD2A6NH11 291 aa17.91■□□□□ 0.46
SRGAP3-208ENST00000490348 CIAO1O76071 339 aa17.91■□□□□ 0.46
SRGAP3-208ENST00000490348 METTL24Q5JXM2 366 aa17.91■□□□□ 0.46
SRGAP3-208ENST00000490348 KCNQ5Q9NR82 932 aa17.91■□□□□ 0.46
SRGAP3-208ENST00000490348 ZNRF3Q9ULT6 936 aa17.91■□□□□ 0.46
SRGAP3-208ENST00000490348 SUPT16HQ9Y5B9 1047 aaKnown RBP17.91■□□□□ 0.46
SRGAP3-208ENST00000490348 DDNO94850 711 aaPredicted RBP17.91■□□□□ 0.46
SRGAP3-208ENST00000490348 SIRT2Q8IXJ6 389 aa17.91■□□□□ 0.46
SRGAP3-208ENST00000490348 FBXO3Q9UK99 471 aa17.91■□□□□ 0.46
SRGAP3-208ENST00000490348 SCN9AQ15858 1988 aa17.9■□□□□ 0.46
SRGAP3-208ENST00000490348 ECE2O60344 883 aa17.9■□□□□ 0.46
SRGAP3-208ENST00000490348 PDE8BO95263 885 aa17.9■□□□□ 0.46
SRGAP3-208ENST00000490348 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.9■□□□□ 0.46
SRGAP3-208ENST00000490348 KCNJ4P48050 445 aa17.89■□□□□ 0.45
SRGAP3-208ENST00000490348 CXCL9Q07325 125 aa17.89■□□□□ 0.45
SRGAP3-208ENST00000490348 C15orf52Q6ZUT6 534 aaKnown RBP17.89■□□□□ 0.45
SRGAP3-208ENST00000490348 CRBNQ96SW2 442 aa17.89■□□□□ 0.45
SRGAP3-208ENST00000490348 POTECB2RU33 542 aa17.88■□□□□ 0.45
SRGAP3-208ENST00000490348 RAD17O75943 681 aa17.88■□□□□ 0.45
SRGAP3-208ENST00000490348 FGFR2P21802 821 aa17.88■□□□□ 0.45
SRGAP3-208ENST00000490348 NMRK2Q9NPI5 230 aa17.88■□□□□ 0.45
SRGAP3-208ENST00000490348 IL15P40933 162 aaPredicted RBP17.87■□□□□ 0.45
SRGAP3-208ENST00000490348 EIF6P56537 245 aaKnown RBP17.87■□□□□ 0.45
SRGAP3-208ENST00000490348 UBE4AQ14139 1066 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms