RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 TAF1P21675 1872 aa19.61■□□□□ 0.73
C9orf3-219ENST00000488186 SRGAP3O43295 1099 aa19.61■□□□□ 0.73
C9orf3-219ENST00000488186 CENPBP07199 599 aaPredicted RBP19.61■□□□□ 0.73
C9orf3-219ENST00000488186 RASSF7Q02833 373 aa19.61■□□□□ 0.73
C9orf3-219ENST00000488186 LRRC37AA6NMS7 1700 aa19.6■□□□□ 0.73
C9orf3-219ENST00000488186 C6orf229H3BNL8 230 aa19.6■□□□□ 0.73
C9orf3-219ENST00000488186 C9orf131Q5VYM1 1079 aa19.6■□□□□ 0.73
C9orf3-219ENST00000488186 ANKRD2Q9GZV1 360 aa19.6■□□□□ 0.73
C9orf3-219ENST00000488186 MINPP1Q9UNW1 487 aa19.6■□□□□ 0.73
C9orf3-219ENST00000488186 GPSM2P81274 684 aa19.59■□□□□ 0.73
C9orf3-219ENST00000488186 ZNF784Q8NCA9 323 aaPredicted RBP19.59■□□□□ 0.73
C9orf3-219ENST00000488186 KCNJ4P48050 445 aa19.58■□□□□ 0.72
C9orf3-219ENST00000488186 RTFDC1Q9BY42 306 aaPredicted RBP19.58■□□□□ 0.72
C9orf3-219ENST00000488186 ZNF277Q9NRM2 450 aaPredicted RBP19.58■□□□□ 0.72
C9orf3-219ENST00000488186 ZBTB40Q9NUA8 1239 aa19.58■□□□□ 0.72
C9orf3-219ENST00000488186 RNF181Q9P0P0 153 aa19.58■□□□□ 0.72
C9orf3-219ENST00000488186 GGA1Q9UJY5 639 aa19.58■□□□□ 0.72
C9orf3-219ENST00000488186 XDHP47989 1333 aa19.57■□□□□ 0.72
C9orf3-219ENST00000488186 ATP2B4P23634 1241 aa19.57■□□□□ 0.72
C9orf3-219ENST00000488186 PRELPP51888 382 aa19.57■□□□□ 0.72
C9orf3-219ENST00000488186 ATP8B2P98198 1209 aa19.57■□□□□ 0.72
C9orf3-219ENST00000488186 SLC51AQ86UW1 340 aa19.57■□□□□ 0.72
C9orf3-219ENST00000488186 KLHDC4Q8TBB5 520 aa19.57■□□□□ 0.72
C9orf3-219ENST00000488186 EYA3Q99504 573 aa19.57■□□□□ 0.72
C9orf3-219ENST00000488186 UFL1O94874 794 aa19.56■□□□□ 0.72
C9orf3-219ENST00000488186 CHRNDQ07001 517 aa19.56■□□□□ 0.72
C9orf3-219ENST00000488186 MTX1Q13505 466 aa19.56■□□□□ 0.72
C9orf3-219ENST00000488186 CRBNQ96SW2 442 aa19.56■□□□□ 0.72
C9orf3-219ENST00000488186 PUS3Q9BZE2 481 aaKnown RBP19.56■□□□□ 0.72
C9orf3-219ENST00000488186 SIL1Q9H173 461 aa19.56■□□□□ 0.72
C9orf3-219ENST00000488186 PODXL2Q9NZ53 605 aa19.56■□□□□ 0.72
C9orf3-219ENST00000488186 MROH5Q6ZUA9 1318 aa19.55■□□□□ 0.72
C9orf3-219ENST00000488186 G3V3G9 751 aa19.55■□□□□ 0.72
C9orf3-219ENST00000488186 PPIP5K2O43314 1243 aa19.55■□□□□ 0.72
C9orf3-219ENST00000488186 IARSP41252 1262 aaKnown RBP19.55■□□□□ 0.72
C9orf3-219ENST00000488186 RFX5P48382 616 aaPredicted RBP19.55■□□□□ 0.72
C9orf3-219ENST00000488186 PTPN12Q05209 780 aaKnown RBP19.55■□□□□ 0.72
C9orf3-219ENST00000488186 WASHC4Q2M389 1173 aa19.55■□□□□ 0.72
C9orf3-219ENST00000488186 METTL24Q5JXM2 366 aa19.55■□□□□ 0.72
C9orf3-219ENST00000488186 DCAF8Q5TAQ9 597 aa19.55■□□□□ 0.72
C9orf3-219ENST00000488186 LARGE2Q8N3Y3 721 aa19.55■□□□□ 0.72
C9orf3-219ENST00000488186 HELBQ8NG08 1087 aaPredicted RBP19.55■□□□□ 0.72
C9orf3-219ENST00000488186 TBC1D16Q8TBP0 767 aa19.55■□□□□ 0.72
C9orf3-219ENST00000488186 JDP2Q8WYK2 163 aa19.55■□□□□ 0.72
C9orf3-219ENST00000488186 ZC3H12CQ9C0D7 883 aaKnown RBP19.55■□□□□ 0.72
C9orf3-219ENST00000488186 LEMD3Q9Y2U8 911 aa19.55■□□□□ 0.72
C9orf3-219ENST00000488186 EYA2O00167 538 aa19.54■□□□□ 0.72
C9orf3-219ENST00000488186 RIMBP2O15034 1052 aa19.54■□□□□ 0.72
C9orf3-219ENST00000488186 G3BP1Q13283 466 aaKnown RBP eCLIP19.54■□□□□ 0.72
C9orf3-219ENST00000488186 LRRC24Q50LG9 513 aa19.54■□□□□ 0.72
C9orf3-219ENST00000488186 RPAP2Q8IXW5 612 aaPredicted RBP19.54■□□□□ 0.72
C9orf3-219ENST00000488186 POLLQ9UGP5 575 aa19.54■□□□□ 0.72
C9orf3-219ENST00000488186 FBXO3Q9UK99 471 aa19.54■□□□□ 0.72
C9orf3-219ENST00000488186 PA2G4Q9UQ80 394 aaKnown RBP19.54■□□□□ 0.72
C9orf3-219ENST00000488186 PNMA6EA0A0J9YXQ4 647 aa19.53■□□□□ 0.72
C9orf3-219ENST00000488186 HMMRO75330 724 aa19.53■□□□□ 0.72
C9orf3-219ENST00000488186 TAF5LO75529 589 aa19.53■□□□□ 0.72
C9orf3-219ENST00000488186 OS9Q13438 667 aaPredicted RBP19.53■□□□□ 0.72
C9orf3-219ENST00000488186 CEP85Q6P2H3 762 aa19.53■□□□□ 0.72
C9orf3-219ENST00000488186 COPRSQ9NQ92 184 aa19.53■□□□□ 0.72
C9orf3-219ENST00000488186 RIPOR2Q9Y4F9 1068 aa19.53■□□□□ 0.72
C9orf3-219ENST00000488186 TIAM2Q8IVF5 1701 aa19.53■□□□□ 0.72
C9orf3-219ENST00000488186 COL4A1P02462 1669 aa19.52■□□□□ 0.72
C9orf3-219ENST00000488186 LTBP1Q14766 1721 aa19.52■□□□□ 0.72
C9orf3-219ENST00000488186 IL15P40933 162 aaPredicted RBP19.52■□□□□ 0.72
C9orf3-219ENST00000488186 AOC3Q16853 763 aa19.52■□□□□ 0.72
C9orf3-219ENST00000488186 CEP126Q9P2H0 1117 aa19.52■□□□□ 0.72
C9orf3-219ENST00000488186 SPEF2Q9C093 1822 aa19.52■□□□□ 0.72
C9orf3-219ENST00000488186 ZNF804BA4D1E1 1349 aa19.51■□□□□ 0.71
C9orf3-219ENST00000488186 SURF6O75683 361 aaKnown RBP19.51■□□□□ 0.71
C9orf3-219ENST00000488186 CIAO1O76071 339 aa19.51■□□□□ 0.71
C9orf3-219ENST00000488186 NIM1KQ8IY84 436 aa19.51■□□□□ 0.71
C9orf3-219ENST00000488186 SSH3Q8TE77 659 aa19.51■□□□□ 0.71
C9orf3-219ENST00000488186 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
C9orf3-219ENST00000488186 GLTPD2A6NH11 291 aa19.5■□□□□ 0.71
C9orf3-219ENST00000488186 KIAA2012Q0VF49 1180 aa19.5■□□□□ 0.71
C9orf3-219ENST00000488186 POLA2Q14181 598 aa19.5■□□□□ 0.71
C9orf3-219ENST00000488186 DPY19L2Q6NUT2 758 aa19.5■□□□□ 0.71
C9orf3-219ENST00000488186 GPR101Q96P66 508 aaPredicted RBP19.5■□□□□ 0.71
C9orf3-219ENST00000488186 FZD9O00144 591 aa19.49■□□□□ 0.71
C9orf3-219ENST00000488186 IRX6P78412 446 aaPredicted RBP19.49■□□□□ 0.71
C9orf3-219ENST00000488186 AAMPQ13685 434 aa19.49■□□□□ 0.71
C9orf3-219ENST00000488186 GPBP1L1Q9HC44 474 aaPredicted RBP19.49■□□□□ 0.71
C9orf3-219ENST00000488186 PDE8BO95263 885 aa19.48■□□□□ 0.71
C9orf3-219ENST00000488186 UBE4AQ14139 1066 aa19.48■□□□□ 0.71
C9orf3-219ENST00000488186 ATG9AQ7Z3C6 839 aa19.48■□□□□ 0.71
C9orf3-219ENST00000488186 DUOX1Q9NRD9 1551 aa19.48■□□□□ 0.71
C9orf3-219ENST00000488186 EIF6P56537 245 aaKnown RBP19.47■□□□□ 0.71
C9orf3-219ENST00000488186 DOK7Q18PE1 504 aa19.47■□□□□ 0.71
C9orf3-219ENST00000488186 HSP90AB4PQ58FF6 505 aa19.47■□□□□ 0.71
C9orf3-219ENST00000488186 EXOC6Q8TAG9 804 aa19.47■□□□□ 0.71
C9orf3-219ENST00000488186 WDR90Q96KV7 1748 aa19.46■□□□□ 0.71
C9orf3-219ENST00000488186 SNAP23O00161 211 aa19.46■□□□□ 0.71
C9orf3-219ENST00000488186 IFIT1P09914 478 aaKnown RBP19.46■□□□□ 0.71
C9orf3-219ENST00000488186 PUM3Q15397 648 aaKnown RBP19.46■□□□□ 0.71
C9orf3-219ENST00000488186 ZNRF3Q9ULT6 936 aa19.46■□□□□ 0.71
C9orf3-219ENST00000488186 WTIPA6NIX2 430 aaPredicted RBP19.45■□□□□ 0.7
C9orf3-219ENST00000488186 SLC5A1P13866 664 aa19.45■□□□□ 0.7
C9orf3-219ENST00000488186 VPS37DQ86XT2 251 aa19.45■□□□□ 0.7
C9orf3-219ENST00000488186 DBNDD1Q9H9R9 158 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms