RNA–Protein interactions for RNA: ENST00000487201.1

RHBDF1-210, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 1,708 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-210ENST00000487201 DPP8Q6V1X1 898 aaPredicted RBP28.1■■■□□ 2.09
RHBDF1-210ENST00000487201 TMX4Q9H1E5 349 aaPredicted RBP28.1■■■□□ 2.09
RHBDF1-210ENST00000487201 MPHOSPH8Q99549 860 aa28.09■■■□□ 2.09
RHBDF1-210ENST00000487201 NSFL1CQ9UNZ2 370 aaKnown RBP28.09■■■□□ 2.09
RHBDF1-210ENST00000487201 COL4A5P29400 1685 aa28.09■■■□□ 2.09
RHBDF1-210ENST00000487201 KLHDC4Q8TBB5 520 aa28.09■■■□□ 2.09
RHBDF1-210ENST00000487201 C1orf115Q9H7X2 142 aa28.09■■■□□ 2.09
RHBDF1-210ENST00000487201 PODXL2Q9NZ53 605 aa28.09■■■□□ 2.09
RHBDF1-210ENST00000487201 TIAM2Q8IVF5 1701 aa28.09■■■□□ 2.09
RHBDF1-210ENST00000487201 MTX1Q13505 466 aa28.08■■■□□ 2.09
RHBDF1-210ENST00000487201 RNF181Q9P0P0 153 aa28.08■■■□□ 2.09
RHBDF1-210ENST00000487201 POLLQ9UGP5 575 aa28.08■■■□□ 2.09
RHBDF1-210ENST00000487201 DDX19BQ9UMR2 479 aa28.07■■■□□ 2.08
RHBDF1-210ENST00000487201 WTIPA6NIX2 430 aaPredicted RBP28.06■■■□□ 2.08
RHBDF1-210ENST00000487201 LDHAL6AQ6ZMR3 332 aa28.06■■■□□ 2.08
RHBDF1-210ENST00000487201 PUS3Q9BZE2 481 aaKnown RBP28.06■■■□□ 2.08
RHBDF1-210ENST00000487201 PTPN12Q05209 780 aaKnown RBP28.06■■■□□ 2.08
RHBDF1-210ENST00000487201 TAF7LQ5H9L4 462 aa28.06■■■□□ 2.08
RHBDF1-210ENST00000487201 IARSP41252 1262 aaKnown RBP28.05■■■□□ 2.08
RHBDF1-210ENST00000487201 TBC1D16Q8TBP0 767 aa28.05■■■□□ 2.08
RHBDF1-210ENST00000487201 ZBTB40Q9NUA8 1239 aa28.05■■■□□ 2.08
RHBDF1-210ENST00000487201 ANKIB1Q9P2G1 1089 aa28.05■■■□□ 2.08
RHBDF1-210ENST00000487201 XDHP47989 1333 aa28.04■■■□□ 2.08
RHBDF1-210ENST00000487201 CHRNDQ07001 517 aa28.04■■■□□ 2.08
RHBDF1-210ENST00000487201 PNMA6EA0A0J9YXQ4 647 aa28.04■■■□□ 2.08
RHBDF1-210ENST00000487201 RIPOR2Q9Y4F9 1068 aa28.04■■■□□ 2.08
RHBDF1-210ENST00000487201 SRGAP3O43295 1099 aa28.03■■■□□ 2.08
RHBDF1-210ENST00000487201 LRRC24Q50LG9 513 aa28.03■■■□□ 2.08
RHBDF1-210ENST00000487201 GPR101Q96P66 508 aaPredicted RBP28.02■■■□□ 2.08
RHBDF1-210ENST00000487201 AOC3Q16853 763 aa28.01■■■□□ 2.07
RHBDF1-210ENST00000487201 SUPT20HQ8NEM7 779 aa28.01■■■□□ 2.07
RHBDF1-210ENST00000487201 CNNM1Q9NRU3 951 aa28.01■■■□□ 2.07
RHBDF1-210ENST00000487201 GGA1Q9UJY5 639 aa28.01■■■□□ 2.07
RHBDF1-210ENST00000487201 UFL1O94874 794 aa28.01■■■□□ 2.07
RHBDF1-210ENST00000487201 HELBQ8NG08 1087 aaPredicted RBP28.01■■■□□ 2.07
RHBDF1-210ENST00000487201 PA2G4Q9UQ80 394 aaKnown RBP28.01■■■□□ 2.07
RHBDF1-210ENST00000487201 SUPT16HQ9Y5B9 1047 aaKnown RBP28.01■■■□□ 2.07
RHBDF1-210ENST00000487201 C6orf229H3BNL8 230 aa28■■■□□ 2.07
RHBDF1-210ENST00000487201 TAF5LO75529 589 aa28■■■□□ 2.07
RHBDF1-210ENST00000487201 YY1P25490 414 aa28■■■□□ 2.07
RHBDF1-210ENST00000487201 KIAA2012Q0VF49 1180 aa28■■■□□ 2.07
RHBDF1-210ENST00000487201 SNAP23O00161 211 aa27.99■■■□□ 2.07
RHBDF1-210ENST00000487201 PPIP5K2O43314 1243 aa27.99■■■□□ 2.07
RHBDF1-210ENST00000487201 ANKRD2Q9GZV1 360 aa27.99■■■□□ 2.07
RHBDF1-210ENST00000487201 VPS33BQ9H267 617 aa27.99■■■□□ 2.07
RHBDF1-210ENST00000487201 COPRSQ9NQ92 184 aa27.99■■■□□ 2.07
RHBDF1-210ENST00000487201 ATP8B2P98198 1209 aa27.98■■■□□ 2.07
RHBDF1-210ENST00000487201 CEP85Q6P2H3 762 aa27.98■■■□□ 2.07
RHBDF1-210ENST00000487201 ATG9AQ7Z3C6 839 aa27.98■■■□□ 2.07
RHBDF1-210ENST00000487201 ATP2B4P23634 1241 aa27.98■■■□□ 2.07
RHBDF1-210ENST00000487201 POLA2Q14181 598 aa27.98■■■□□ 2.07
RHBDF1-210ENST00000487201 WASHC4Q2M389 1173 aa27.98■■■□□ 2.07
RHBDF1-210ENST00000487201 LARGE2Q8N3Y3 721 aa27.98■■■□□ 2.07
RHBDF1-210ENST00000487201 EYA2O00167 538 aa27.97■■■□□ 2.07
RHBDF1-210ENST00000487201 VGLL2Q8N8G2 317 aa27.97■■■□□ 2.07
RHBDF1-210ENST00000487201 SSH3Q8TE77 659 aa27.97■■■□□ 2.07
RHBDF1-210ENST00000487201 SIL1Q9H173 461 aa27.97■■■□□ 2.07
RHBDF1-210ENST00000487201 ZC3H4Q9UPT8 1303 aaKnown RBP27.97■■■□□ 2.07
RHBDF1-210ENST00000487201 LEMD3Q9Y2U8 911 aa27.95■■■□□ 2.07
RHBDF1-210ENST00000487201 ZNF804BA4D1E1 1349 aa27.95■■■□□ 2.07
RHBDF1-210ENST00000487201 MROH5Q6ZUA9 1318 aa27.95■■■□□ 2.07
RHBDF1-210ENST00000487201 IRS2Q9Y4H2 1338 aa27.95■■■□□ 2.07
RHBDF1-210ENST00000487201 FZD9O00144 591 aa27.95■■■□□ 2.06
RHBDF1-210ENST00000487201 RIMBP2O15034 1052 aa27.95■■■□□ 2.06
RHBDF1-210ENST00000487201 KLRK1P26718 216 aa27.95■■■□□ 2.06
RHBDF1-210ENST00000487201 CIAO1O76071 339 aa27.94■■■□□ 2.06
RHBDF1-210ENST00000487201 TXNRD3Q86VQ6 643 aa27.94■■■□□ 2.06
RHBDF1-210ENST00000487201 CRBNQ96SW2 442 aa27.94■■■□□ 2.06
RHBDF1-210ENST00000487201 EYA3Q99504 573 aa27.94■■■□□ 2.06
RHBDF1-210ENST00000487201 CHMP4BQ9H444 224 aaKnown RBP27.94■■■□□ 2.06
RHBDF1-210ENST00000487201 FBXO3Q9UK99 471 aa27.94■■■□□ 2.06
RHBDF1-210ENST00000487201 SIRT2Q8IXJ6 389 aa27.93■■■□□ 2.06
RHBDF1-210ENST00000487201 JDP2Q8WYK2 163 aa27.93■■■□□ 2.06
RHBDF1-210ENST00000487201 MED23Q9ULK4 1368 aa27.93■■■□□ 2.06
RHBDF1-210ENST00000487201 SCN9AQ15858 1988 aa27.93■■■□□ 2.06
RHBDF1-210ENST00000487201 METTL24Q5JXM2 366 aa27.92■■■□□ 2.06
RHBDF1-210ENST00000487201 ZC3H12CQ9C0D7 883 aaKnown RBP27.92■■■□□ 2.06
RHBDF1-210ENST00000487201 ZNF541Q9H0D2 1346 aa27.92■■■□□ 2.06
RHBDF1-210ENST00000487201 NIM1KQ8IY84 436 aa27.91■■■□□ 2.06
RHBDF1-210ENST00000487201 YDJCA8MPS7 323 aa27.9■■■□□ 2.06
RHBDF1-210ENST00000487201 PDE8BO95263 885 aa27.9■■■□□ 2.06
RHBDF1-210ENST00000487201 DBNDD1Q9H9R9 158 aa27.9■■■□□ 2.06
RHBDF1-210ENST00000487201 DOK7Q18PE1 504 aa27.89■■■□□ 2.06
RHBDF1-210ENST00000487201 IL15P40933 162 aaPredicted RBP27.89■■■□□ 2.05
RHBDF1-210ENST00000487201 KCNJ4P48050 445 aa27.89■■■□□ 2.05
RHBDF1-210ENST00000487201 RPAP2Q8IXW5 612 aaPredicted RBP27.89■■■□□ 2.05
RHBDF1-210ENST00000487201 ZNRF3Q9ULT6 936 aa27.89■■■□□ 2.05
RHBDF1-210ENST00000487201 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.89■■■□□ 2.05
RHBDF1-210ENST00000487201 UBE4AQ14139 1066 aa27.88■■■□□ 2.05
RHBDF1-210ENST00000487201 C15orf52Q6ZUT6 534 aaKnown RBP27.88■■■□□ 2.05
RHBDF1-210ENST00000487201 GLTPD2A6NH11 291 aa27.87■■■□□ 2.05
RHBDF1-210ENST00000487201 ZNF784Q8NCA9 323 aaPredicted RBP27.87■■■□□ 2.05
RHBDF1-210ENST00000487201 ECE2O60344 883 aa27.87■■■□□ 2.05
RHBDF1-210ENST00000487201 PSME4Q14997 1843 aa27.86■■■□□ 2.05
RHBDF1-210ENST00000487201 FGFR2P21802 821 aa27.86■■■□□ 2.05
RHBDF1-210ENST00000487201 KCNQ5Q9NR82 932 aa27.86■■■□□ 2.05
RHBDF1-210ENST00000487201 NOP58Q9Y2X3 529 aaKnown RBP27.86■■■□□ 2.05
RHBDF1-210ENST00000487201 ZNF646O15015 1829 aaPredicted RBP27.85■■■□□ 2.05
RHBDF1-210ENST00000487201 ZNF526Q8TF50 670 aaPredicted RBP27.85■■■□□ 2.05
RHBDF1-210ENST00000487201 DDNO94850 711 aaPredicted RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms