RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 KRT24Q2M2I5 525 aa19.61■□□□□ 0.73
PFDN4-204ENST00000487129 RASAL3Q86YV0 1011 aa19.61■□□□□ 0.73
PFDN4-204ENST00000487129 CDCA5Q96FF9 252 aa19.61■□□□□ 0.73
PFDN4-204ENST00000487129 BABAM1Q9NWV8 329 aa19.61■□□□□ 0.73
PFDN4-204ENST00000487129 AKAP11Q9UKA4 1901 aa19.61■□□□□ 0.73
PFDN4-204ENST00000487129 ISCA1Q9BUE6 129 aa19.6■□□□□ 0.73
PFDN4-204ENST00000487129 MAPK8IP3Q9UPT6 1336 aa19.59■□□□□ 0.73
PFDN4-204ENST00000487129 TBC1D16Q8TBP0 767 aa19.59■□□□□ 0.73
PFDN4-204ENST00000487129 FAM89AQ96GI7 184 aa19.59■□□□□ 0.73
PFDN4-204ENST00000487129 C6orf229H3BNL8 230 aa19.58■□□□□ 0.72
PFDN4-204ENST00000487129 ZNF280AP59817 542 aaPredicted RBP19.58■□□□□ 0.72
PFDN4-204ENST00000487129 SULF1Q8IWU6 871 aa19.58■□□□□ 0.72
PFDN4-204ENST00000487129 HPS5Q9UPZ3 1129 aa19.58■□□□□ 0.72
PFDN4-204ENST00000487129 PAPPA2Q9BXP8 1791 aa19.57■□□□□ 0.72
PFDN4-204ENST00000487129 CHPF2Q9P2E5 772 aa19.57■□□□□ 0.72
PFDN4-204ENST00000487129 RIPK4P57078 832 aa19.56■□□□□ 0.72
PFDN4-204ENST00000487129 PLBD2Q8NHP8 589 aa19.56■□□□□ 0.72
PFDN4-204ENST00000487129 GMLQ99445 158 aa19.56■□□□□ 0.72
PFDN4-204ENST00000487129 EYA3Q99504 573 aa19.56■□□□□ 0.72
PFDN4-204ENST00000487129 PODXL2Q9NZ53 605 aa19.56■□□□□ 0.72
PFDN4-204ENST00000487129 ATP5J2-PTCD1G3V325 749 aa19.55■□□□□ 0.72
PFDN4-204ENST00000487129 ANGEL2Q5VTE6 544 aaKnown RBP19.55■□□□□ 0.72
PFDN4-204ENST00000487129 CHL1O00533 1208 aa19.54■□□□□ 0.72
PFDN4-204ENST00000487129 TMPOP42166 694 aaKnown RBP19.54■□□□□ 0.72
PFDN4-204ENST00000487129 RPS8P62241 208 aaKnown RBP19.54■□□□□ 0.72
PFDN4-204ENST00000487129 MOB2Q70IA6 237 aa19.54■□□□□ 0.72
PFDN4-204ENST00000487129 REM2Q8IYK8 340 aaPredicted RBP19.54■□□□□ 0.72
PFDN4-204ENST00000487129 PSME4Q14997 1843 aa19.53■□□□□ 0.72
PFDN4-204ENST00000487129 FKBP1BP68106 108 aa19.53■□□□□ 0.72
PFDN4-204ENST00000487129 SCARF1Q14162 830 aa19.53■□□□□ 0.72
PFDN4-204ENST00000487129 ANKRD13DQ6ZTN6 518 aa19.53■□□□□ 0.72
PFDN4-204ENST00000487129 ZNF296Q8WUU4 475 aaPredicted RBP19.53■□□□□ 0.72
PFDN4-204ENST00000487129 PNNQ9H307 717 aaKnown RBP19.53■□□□□ 0.72
PFDN4-204ENST00000487129 TRIM28Q13263 835 aaKnown RBP19.52■□□□□ 0.72
PFDN4-204ENST00000487129 RTL5Q5HYW3 569 aaPredicted RBP19.52■□□□□ 0.72
PFDN4-204ENST00000487129 RSBN1LQ6PCB5 846 aaPredicted RBP19.52■□□□□ 0.72
PFDN4-204ENST00000487129 AGBL3Q8NEM8 1001 aa19.52■□□□□ 0.72
PFDN4-204ENST00000487129 ZC3H12CQ9C0D7 883 aaKnown RBP19.52■□□□□ 0.72
PFDN4-204ENST00000487129 SEC31BQ9NQW1 1179 aa19.52■□□□□ 0.72
PFDN4-204ENST00000487129 SCAF8Q9UPN6 1271 aaKnown RBP19.52■□□□□ 0.72
PFDN4-204ENST00000487129 PITPNM2Q9BZ72 1349 aa19.51■□□□□ 0.71
PFDN4-204ENST00000487129 IRS4O14654 1257 aaPredicted RBP19.51■□□□□ 0.71
PFDN4-204ENST00000487129 PKN2Q16513 984 aaKnown RBP19.51■□□□□ 0.71
PFDN4-204ENST00000487129 HTTP42858 3142 aa19.51■□□□□ 0.71
PFDN4-204ENST00000487129 UFL1O94874 794 aa19.5■□□□□ 0.71
PFDN4-204ENST00000487129 TBC1D8O95759 1140 aa19.5■□□□□ 0.71
PFDN4-204ENST00000487129 HDGFL1Q5TGJ6 251 aa19.5■□□□□ 0.71
PFDN4-204ENST00000487129 ZNF646O15015 1829 aaPredicted RBP19.49■□□□□ 0.71
PFDN4-204ENST00000487129 NOM1Q5C9Z4 860 aaKnown RBP19.49■□□□□ 0.71
PFDN4-204ENST00000487129 MYOZ2Q9NPC6 264 aa19.49■□□□□ 0.71
PFDN4-204ENST00000487129 UBE2Q2LH0YL09 131 aa19.48■□□□□ 0.71
PFDN4-204ENST00000487129 HOXB7P09629 217 aa19.48■□□□□ 0.71
PFDN4-204ENST00000487129 TM4SF4P48230 202 aa19.48■□□□□ 0.71
PFDN4-204ENST00000487129 LMOD3Q0VAK6 560 aa19.48■□□□□ 0.71
PFDN4-204ENST00000487129 GGA1Q9UJY5 639 aa19.48■□□□□ 0.71
PFDN4-204ENST00000487129 MKI67P46013 3256 aaKnown RBP19.48■□□□□ 0.71
PFDN4-204ENST00000487129 WTIPA6NIX2 430 aaPredicted RBP19.47■□□□□ 0.71
PFDN4-204ENST00000487129 USP17L8P0C7I0 530 aa19.47■□□□□ 0.71
PFDN4-204ENST00000487129 PRAMEF18Q5VWM3 479 aa19.47■□□□□ 0.71
PFDN4-204ENST00000487129 ZBTB38Q8NAP3 1195 aaPredicted RBP19.47■□□□□ 0.71
PFDN4-204ENST00000487129 DBF4Q9UBU7 674 aaPredicted RBP19.47■□□□□ 0.71
PFDN4-204ENST00000487129 TRIM35Q9UPQ4 493 aa19.47■□□□□ 0.71
PFDN4-204ENST00000487129 GPR25O00155 361 aa19.46■□□□□ 0.71
PFDN4-204ENST00000487129 R3HDMLQ9H3Y0 253 aa19.46■□□□□ 0.71
PFDN4-204ENST00000487129 ANKIB1Q9P2G1 1089 aa19.46■□□□□ 0.71
PFDN4-204ENST00000487129 NBPF9Q3BBW0 867 aa19.45■□□□□ 0.7
PFDN4-204ENST00000487129 FBXO46Q6PJ61 603 aaPredicted RBP19.45■□□□□ 0.7
PFDN4-204ENST00000487129 CFHR5Q9BXR6 569 aa19.45■□□□□ 0.7
PFDN4-204ENST00000487129 HDAC9Q9UKV0 1011 aa19.45■□□□□ 0.7
PFDN4-204ENST00000487129 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
PFDN4-204ENST00000487129 USP17L3A6NCW0 530 aa19.43■□□□□ 0.7
PFDN4-204ENST00000487129 USP17L4A6NCW7 530 aa19.43■□□□□ 0.7
PFDN4-204ENST00000487129 USP17L1Q7RTZ2 530 aa19.43■□□□□ 0.7
PFDN4-204ENST00000487129 G3V3G9 751 aa19.42■□□□□ 0.7
PFDN4-204ENST00000487129 DACT2Q5SW24 774 aa19.42■□□□□ 0.7
PFDN4-204ENST00000487129 DCAF8Q5TAQ9 597 aa19.42■□□□□ 0.7
PFDN4-204ENST00000487129 PODNQ7Z5L7 613 aa19.42■□□□□ 0.7
PFDN4-204ENST00000487129 MXD3Q9BW11 206 aa19.42■□□□□ 0.7
PFDN4-204ENST00000487129 XDHP47989 1333 aa19.42■□□□□ 0.7
PFDN4-204ENST00000487129 WNT10BO00744 389 aa19.41■□□□□ 0.7
PFDN4-204ENST00000487129 PCCAP05165 728 aaPredicted RBP19.41■□□□□ 0.7
PFDN4-204ENST00000487129 NEUROD2Q15784 382 aa19.41■□□□□ 0.7
PFDN4-204ENST00000487129 DUSP27Q5VZP5 1158 aa19.41■□□□□ 0.7
PFDN4-204ENST00000487129 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
PFDN4-204ENST00000487129 LAS1LQ9Y4W2 734 aaKnown RBP19.41■□□□□ 0.7
PFDN4-204ENST00000487129 MKRN3Q13064 507 aaKnown RBP19.4■□□□□ 0.7
PFDN4-204ENST00000487129 CCDC152Q4G0S7 254 aa19.4■□□□□ 0.7
PFDN4-204ENST00000487129 JARID2Q92833 1246 aaPredicted RBP19.4■□□□□ 0.7
PFDN4-204ENST00000487129 CCDC85AQ96PX6 553 aaPredicted RBP19.4■□□□□ 0.7
PFDN4-204ENST00000487129 PHAXQ9H814 394 aaKnown RBP19.4■□□□□ 0.7
PFDN4-204ENST00000487129 MED23Q9ULK4 1368 aa19.4■□□□□ 0.7
PFDN4-204ENST00000487129 PDE8AO60658 829 aa19.39■□□□□ 0.69
PFDN4-204ENST00000487129 ATP2B4P23634 1241 aa19.39■□□□□ 0.69
PFDN4-204ENST00000487129 PTPN12Q05209 780 aaKnown RBP19.39■□□□□ 0.69
PFDN4-204ENST00000487129 FKTNO75072 461 aa19.38■□□□□ 0.69
PFDN4-204ENST00000487129 LDLRAD1Q5T700 205 aa19.38■□□□□ 0.69
PFDN4-204ENST00000487129 RIC3Q7Z5B4 369 aa19.38■□□□□ 0.69
PFDN4-204ENST00000487129 CCDC191Q8NCU4 936 aa19.38■□□□□ 0.69
PFDN4-204ENST00000487129 MYD88Q99836 296 aa19.38■□□□□ 0.69
PFDN4-204ENST00000487129 BRCA2P51587 3418 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms