RNA–Protein interactions for RNA: ENST00000487054.1

LBR-207, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-207ENST00000487054 TRPM7Q96QT4 1865 aa12.97□□□□□ -0.33
LBR-207ENST00000487054 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
LBR-207ENST00000487054 VEGFBP49765 207 aa12.97□□□□□ -0.33
LBR-207ENST00000487054 CCDC30Q5VVM6 783 aa12.97□□□□□ -0.33
LBR-207ENST00000487054 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
LBR-207ENST00000487054 METTL22Q9BUU2 404 aaPredicted RBP12.97□□□□□ -0.33
LBR-207ENST00000487054 DBNDD1Q9H9R9 158 aa12.97□□□□□ -0.33
LBR-207ENST00000487054 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
LBR-207ENST00000487054 NSFL1CQ9UNZ2 370 aaKnown RBP12.97□□□□□ -0.33
LBR-207ENST00000487054 MAP3K2Q9Y2U5 619 aa12.97□□□□□ -0.33
LBR-207ENST00000487054 MYH3P11055 1940 aa12.97□□□□□ -0.33
LBR-207ENST00000487054 FANCIQ9NVI1 1328 aa12.96□□□□□ -0.33
LBR-207ENST00000487054 PI4KAP2A4QPH2 592 aa12.96□□□□□ -0.33
LBR-207ENST00000487054 IGKV5-2P06315 115 aa12.96□□□□□ -0.33
LBR-207ENST00000487054 CIAPIN1Q6FI81 312 aa12.96□□□□□ -0.33
LBR-207ENST00000487054 PI4KAP1Q8N8J0 262 aa12.96□□□□□ -0.33
LBR-207ENST00000487054 VPS33BQ9H267 617 aa12.96□□□□□ -0.33
LBR-207ENST00000487054 ZBED9Q6R2W3 1325 aa12.95□□□□□ -0.34
LBR-207ENST00000487054 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
LBR-207ENST00000487054 PCCAP05165 728 aaPredicted RBP12.95□□□□□ -0.34
LBR-207ENST00000487054 HIRAP54198 1017 aaPredicted RBP12.95□□□□□ -0.34
LBR-207ENST00000487054 DOK7Q18PE1 504 aa12.95□□□□□ -0.34
LBR-207ENST00000487054 WASHC4Q2M389 1173 aa12.95□□□□□ -0.34
LBR-207ENST00000487054 CWF19L2Q2TBE0 894 aaKnown RBP12.95□□□□□ -0.34
LBR-207ENST00000487054 TWISTNBQ3B726 338 aaPredicted RBP12.95□□□□□ -0.34
LBR-207ENST00000487054 USP50Q70EL3 339 aaPredicted RBP12.95□□□□□ -0.34
LBR-207ENST00000487054 CCDC191Q8NCU4 936 aa12.95□□□□□ -0.34
LBR-207ENST00000487054 TRPM4Q8TD43 1214 aa12.95□□□□□ -0.34
LBR-207ENST00000487054 CWC25Q9NXE8 425 aaPredicted RBP12.95□□□□□ -0.34
LBR-207ENST00000487054 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
LBR-207ENST00000487054 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
LBR-207ENST00000487054 CT47B1P0C2W7 299 aaPredicted RBP12.94□□□□□ -0.34
LBR-207ENST00000487054 RPS8P62241 208 aaKnown RBP12.94□□□□□ -0.34
LBR-207ENST00000487054 HNRNPUQ00839 825 aaKnown RBP eCLIP12.94□□□□□ -0.34
LBR-207ENST00000487054 SLFN5Q08AF3 891 aa12.94□□□□□ -0.34
LBR-207ENST00000487054 DLK2Q6UY11 383 aa12.94□□□□□ -0.34
LBR-207ENST00000487054 KSR2Q6VAB6 950 aa12.94□□□□□ -0.34
LBR-207ENST00000487054 TMC4Q7Z404 712 aa12.94□□□□□ -0.34
LBR-207ENST00000487054 TBC1D16Q8TBP0 767 aa12.94□□□□□ -0.34
LBR-207ENST00000487054 BCL2L13Q9BXK5 485 aa12.94□□□□□ -0.34
LBR-207ENST00000487054 ADARB2Q9NS39 739 aaKnown RBP12.94□□□□□ -0.34
LBR-207ENST00000487054 PSMD14O00487 310 aa12.93□□□□□ -0.34
LBR-207ENST00000487054 FOXN1O15353 648 aa12.93□□□□□ -0.34
LBR-207ENST00000487054 PDE8AO60658 829 aa12.93□□□□□ -0.34
LBR-207ENST00000487054 DDX58O95786 925 aaKnown RBP12.93□□□□□ -0.34
LBR-207ENST00000487054 EGFRP00533 1210 aa12.93□□□□□ -0.34
LBR-207ENST00000487054 CST9Q5W186 159 aa12.93□□□□□ -0.34
LBR-207ENST00000487054 TRMT2AQ8IZ69 625 aaKnown RBP12.93□□□□□ -0.34
LBR-207ENST00000487054 GLIS2Q9BZE0 524 aaPredicted RBP12.93□□□□□ -0.34
LBR-207ENST00000487054 ABT1Q9ULW3 272 aaKnown RBP12.93□□□□□ -0.34
LBR-207ENST00000487054 PSME4Q14997 1843 aa12.92□□□□□ -0.34
LBR-207ENST00000487054 POLR2AP24928 1970 aaKnown RBP12.92□□□□□ -0.34
LBR-207ENST00000487054 RASSF10A6NK89 507 aa12.92□□□□□ -0.34
LBR-207ENST00000487054 ECE2O60344 883 aa12.92□□□□□ -0.34
LBR-207ENST00000487054 TNIP1Q15025 636 aa12.92□□□□□ -0.34
LBR-207ENST00000487054 MICALL2Q8IY33 904 aa12.92□□□□□ -0.34
LBR-207ENST00000487054 STK31Q9BXU1 1019 aa12.92□□□□□ -0.34
LBR-207ENST00000487054 CNOT7Q9UIV1 285 aaKnown RBP12.92□□□□□ -0.34
LBR-207ENST00000487054 ZNF646O15015 1829 aaPredicted RBP12.92□□□□□ -0.34
LBR-207ENST00000487054 THSD7BQ9C0I4 1608 aa12.91□□□□□ -0.34
LBR-207ENST00000487054 CDHR2Q9BYE9 1310 aa12.91□□□□□ -0.34
LBR-207ENST00000487054 NEURL1BA8MQ27 555 aa12.91□□□□□ -0.34
LBR-207ENST00000487054 UFL1O94874 794 aa12.91□□□□□ -0.34
LBR-207ENST00000487054 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
LBR-207ENST00000487054 DEFB115Q30KQ5 88 aa12.91□□□□□ -0.34
LBR-207ENST00000487054 CCDC152Q4G0S7 254 aa12.91□□□□□ -0.34
LBR-207ENST00000487054 SAMD7Q7Z3H4 446 aa12.91□□□□□ -0.34
LBR-207ENST00000487054 GREM2Q9H772 168 aa12.91□□□□□ -0.34
LBR-207ENST00000487054 CTSWP56202 376 aa12.9□□□□□ -0.34
LBR-207ENST00000487054 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.34
LBR-207ENST00000487054 FLIIQ13045 1269 aa12.9□□□□□ -0.34
LBR-207ENST00000487054 GRM1Q13255 1194 aa12.9□□□□□ -0.34
LBR-207ENST00000487054 TBC1D10BQ4KMP7 808 aaPredicted RBP12.9□□□□□ -0.34
LBR-207ENST00000487054 TNS4Q8IZW8 715 aa12.9□□□□□ -0.34
LBR-207ENST00000487054 TTLL11Q8NHH1 800 aa12.9□□□□□ -0.34
LBR-207ENST00000487054 PODXL2Q9NZ53 605 aa12.9□□□□□ -0.34
LBR-207ENST00000487054 ANKIB1Q9P2G1 1089 aa12.9□□□□□ -0.34
LBR-207ENST00000487054 WDR33Q9C0J8 1336 aaKnown RBP12.89□□□□□ -0.35
LBR-207ENST00000487054 HAX1O00165 279 aa12.89□□□□□ -0.35
LBR-207ENST00000487054 VAMP4O75379 141 aa12.89□□□□□ -0.35
LBR-207ENST00000487054 CYP4F22Q6NT55 531 aa12.89□□□□□ -0.35
LBR-207ENST00000487054 UBE3BQ7Z3V4 1068 aa12.89□□□□□ -0.35
LBR-207ENST00000487054 EYA3Q99504 573 aa12.89□□□□□ -0.35
LBR-207ENST00000487054 PGAP2Q9UHJ9 254 aa12.89□□□□□ -0.35
LBR-207ENST00000487054 A0A1B0GUL6 1792 aa12.89□□□□□ -0.35
LBR-207ENST00000487054 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
LBR-207ENST00000487054 H7C1W4 665 aa12.88□□□□□ -0.35
LBR-207ENST00000487054 CELF2O95319 508 aaKnown RBP12.88□□□□□ -0.35
LBR-207ENST00000487054 NEXNQ0ZGT2 675 aa12.88□□□□□ -0.35
LBR-207ENST00000487054 FKBP5Q13451 457 aaPredicted RBP12.88□□□□□ -0.35
LBR-207ENST00000487054 RBM26Q5T8P6 1007 aaKnown RBP12.88□□□□□ -0.35
LBR-207ENST00000487054 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
LBR-207ENST00000487054 ANKRD18AQ8IVF6 992 aa12.88□□□□□ -0.35
LBR-207ENST00000487054 ZC3H12CQ9C0D7 883 aaKnown RBP12.88□□□□□ -0.35
LBR-207ENST00000487054 ZNF408Q9H9D4 720 aa12.88□□□□□ -0.35
LBR-207ENST00000487054 GGA1Q9UJY5 639 aa12.88□□□□□ -0.35
LBR-207ENST00000487054 F6X3S4 739 aa12.87□□□□□ -0.35
LBR-207ENST00000487054 H7C1D1 291 aa12.87□□□□□ -0.35
LBR-207ENST00000487054 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
LBR-207ENST00000487054 CASP7P55210 303 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms