RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 KAZALD1Q96I82 304 aa20.45■□□□□ 0.86
DDR1-246ENST00000485023 MPHOSPH8Q99549 860 aa20.45■□□□□ 0.86
DDR1-246ENST00000485023 BICC1Q9H694 974 aaKnown RBP20.45■□□□□ 0.86
DDR1-246ENST00000485023 BSDC1Q9NW68 430 aaPredicted RBP20.45■□□□□ 0.86
DDR1-246ENST00000485023 GGA1Q9UJY5 639 aa20.45■□□□□ 0.86
DDR1-246ENST00000485023 UTYO14607 1347 aa20.45■□□□□ 0.86
DDR1-246ENST00000485023 VEGFAP15692 232 aaPredicted RBP20.44■□□□□ 0.86
DDR1-246ENST00000485023 TAF7LQ5H9L4 462 aa20.44■□□□□ 0.86
DDR1-246ENST00000485023 CLUAP1Q96AJ1 413 aa20.44■□□□□ 0.86
DDR1-246ENST00000485023 ZNF594Q96JF6 807 aaPredicted RBP20.44■□□□□ 0.86
DDR1-246ENST00000485023 USP44Q9H0E7 712 aa20.44■□□□□ 0.86
DDR1-246ENST00000485023 DBNDD1Q9H9R9 158 aa20.44■□□□□ 0.86
DDR1-246ENST00000485023 MINPP1Q9UNW1 487 aa20.44■□□□□ 0.86
DDR1-246ENST00000485023 XDHP47989 1333 aa20.44■□□□□ 0.86
DDR1-246ENST00000485023 WTIPA6NIX2 430 aaPredicted RBP20.43■□□□□ 0.86
DDR1-246ENST00000485023 POTECB2RU33 542 aa20.43■□□□□ 0.86
DDR1-246ENST00000485023 TRIM27P14373 513 aa20.43■□□□□ 0.86
DDR1-246ENST00000485023 DOK7Q18PE1 504 aa20.43■□□□□ 0.86
DDR1-246ENST00000485023 CCDC57Q2TAC2 916 aa20.43■□□□□ 0.86
DDR1-246ENST00000485023 EYA3Q99504 573 aa20.43■□□□□ 0.86
DDR1-246ENST00000485023 VPS33BQ9H267 617 aa20.43■□□□□ 0.86
DDR1-246ENST00000485023 PODXL2Q9NZ53 605 aa20.43■□□□□ 0.86
DDR1-246ENST00000485023 ZNRF3Q9ULT6 936 aa20.43■□□□□ 0.86
DDR1-246ENST00000485023 IPO8O15397 1037 aaKnown RBP20.42■□□□□ 0.86
DDR1-246ENST00000485023 RAD17O75943 681 aa20.41■□□□□ 0.86
DDR1-246ENST00000485023 TOMM70O94826 608 aa20.41■□□□□ 0.86
DDR1-246ENST00000485023 ATF7IPQ6VMQ6 1270 aa20.41■□□□□ 0.86
DDR1-246ENST00000485023 GPC2Q8N158 579 aa20.41■□□□□ 0.86
DDR1-246ENST00000485023 ANKRD44Q8N8A2 993 aa20.41■□□□□ 0.86
DDR1-246ENST00000485023 ARHGAP45Q92619 1136 aa20.41■□□□□ 0.86
DDR1-246ENST00000485023 YTHDC1Q96MU7 727 aaKnown RBP20.41■□□□□ 0.86
DDR1-246ENST00000485023 YDJCA8MPS7 323 aa20.4■□□□□ 0.86
DDR1-246ENST00000485023 UBTFL1P0CB47 393 aaPredicted RBP20.4■□□□□ 0.86
DDR1-246ENST00000485023 ATP2B4P23634 1241 aa20.4■□□□□ 0.86
DDR1-246ENST00000485023 CXCL9Q07325 125 aa20.4■□□□□ 0.86
DDR1-246ENST00000485023 ZC3H12CQ9C0D7 883 aaKnown RBP20.4■□□□□ 0.86
DDR1-246ENST00000485023 G3V3G9 751 aa20.39■□□□□ 0.85
DDR1-246ENST00000485023 ECE2O60344 883 aa20.39■□□□□ 0.85
DDR1-246ENST00000485023 CHRNDQ07001 517 aa20.39■□□□□ 0.85
DDR1-246ENST00000485023 DCAF8Q5TAQ9 597 aa20.39■□□□□ 0.85
DDR1-246ENST00000485023 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.85
DDR1-246ENST00000485023 HELBQ8NG08 1087 aaPredicted RBP20.39■□□□□ 0.85
DDR1-246ENST00000485023 L3MBTL3Q96JM7 780 aaPredicted RBP20.39■□□□□ 0.85
DDR1-246ENST00000485023 MEIS3Q99687 375 aa20.39■□□□□ 0.85
DDR1-246ENST00000485023 CNNM1Q9NRU3 951 aa20.39■□□□□ 0.85
DDR1-246ENST00000485023 IQCA1LA6NCM1 817 aa20.38■□□□□ 0.85
DDR1-246ENST00000485023 TAF5LO75529 589 aa20.38■□□□□ 0.85
DDR1-246ENST00000485023 RABL6Q3YEC7 729 aaPredicted RBP20.38■□□□□ 0.85
DDR1-246ENST00000485023 CIAPIN1Q6FI81 312 aa20.38■□□□□ 0.85
DDR1-246ENST00000485023 HACL1Q9UJ83 578 aa20.38■□□□□ 0.85
DDR1-246ENST00000485023 PLIN1O60240 522 aa20.37■□□□□ 0.85
DDR1-246ENST00000485023 POTEIP0CG38 1075 aa20.37■□□□□ 0.85
DDR1-246ENST00000485023 POTEJP0CG39 1038 aa20.37■□□□□ 0.85
DDR1-246ENST00000485023 KLRK1P26718 216 aa20.37■□□□□ 0.85
DDR1-246ENST00000485023 KCNJ4P48050 445 aa20.37■□□□□ 0.85
DDR1-246ENST00000485023 EAPPQ56P03 285 aaPredicted RBP20.37■□□□□ 0.85
DDR1-246ENST00000485023 INTS3Q68E01 1043 aaKnown RBP20.37■□□□□ 0.85
DDR1-246ENST00000485023 LDHAL6AQ6ZMR3 332 aa20.37■□□□□ 0.85
DDR1-246ENST00000485023 ANKRD2Q9GZV1 360 aa20.37■□□□□ 0.85
DDR1-246ENST00000485023 KCNQ5Q9NR82 932 aa20.37■□□□□ 0.85
DDR1-246ENST00000485023 LRRFIP2Q9Y608 721 aaKnown RBP20.37■□□□□ 0.85
DDR1-246ENST00000485023 SNAP23O00161 211 aa20.36■□□□□ 0.85
DDR1-246ENST00000485023 LMOD1P29536 600 aaPredicted RBP20.36■□□□□ 0.85
DDR1-246ENST00000485023 SCNN1DP51172 638 aa20.36■□□□□ 0.85
DDR1-246ENST00000485023 TMEM57Q8N5G2 664 aa20.36■□□□□ 0.85
DDR1-246ENST00000485023 KLHDC4Q8TBB5 520 aa20.36■□□□□ 0.85
DDR1-246ENST00000485023 RBM46Q8TBY0 533 aaKnown RBP20.36■□□□□ 0.85
DDR1-246ENST00000485023 PUS3Q9BZE2 481 aaKnown RBP20.36■□□□□ 0.85
DDR1-246ENST00000485023 TAF1DQ9H5J8 278 aaPredicted RBP20.36■□□□□ 0.85
DDR1-246ENST00000485023 MED23Q9ULK4 1368 aa20.35■□□□□ 0.85
DDR1-246ENST00000485023 ZNF804BA4D1E1 1349 aa20.35■□□□□ 0.85
DDR1-246ENST00000485023 EPHX2P34913 555 aa20.35■□□□□ 0.85
DDR1-246ENST00000485023 GMPSP49915 693 aaPredicted RBP20.35■□□□□ 0.85
DDR1-246ENST00000485023 FTSJ3Q8IY81 847 aaKnown RBP20.35■□□□□ 0.85
DDR1-246ENST00000485023 A0A1B0GUL6 1792 aa20.35■□□□□ 0.85
DDR1-246ENST00000485023 PSMD14O00487 310 aa20.34■□□□□ 0.85
DDR1-246ENST00000485023 TNIP1Q15025 636 aa20.34■□□□□ 0.85
DDR1-246ENST00000485023 TXNRD3Q86VQ6 643 aa20.34■□□□□ 0.85
DDR1-246ENST00000485023 LEMD3Q9Y2U8 911 aa20.34■□□□□ 0.85
DDR1-246ENST00000485023 ZBTB12Q9Y330 459 aaPredicted RBP20.34■□□□□ 0.85
DDR1-246ENST00000485023 SCN4AP35499 1836 aa20.34■□□□□ 0.85
DDR1-246ENST00000485023 EPS15P42566 896 aa20.33■□□□□ 0.85
DDR1-246ENST00000485023 SMC1BQ8NDV3 1235 aa20.33■□□□□ 0.85
DDR1-246ENST00000485023 CEP350Q5VT06 3117 aa20.32■□□□□ 0.84
DDR1-246ENST00000485023 LRRC24Q50LG9 513 aa20.32■□□□□ 0.84
DDR1-246ENST00000485023 CLEC11AQ9Y240 323 aa20.32■□□□□ 0.84
DDR1-246ENST00000485023 SHTN1A0MZ66 631 aa20.31■□□□□ 0.84
DDR1-246ENST00000485023 RLBP1P12271 317 aa20.31■□□□□ 0.84
DDR1-246ENST00000485023 DZIP1LQ8IYY4 767 aaKnown RBP20.31■□□□□ 0.84
DDR1-246ENST00000485023 FBXW7Q969H0 707 aa20.31■□□□□ 0.84
DDR1-246ENST00000485023 GPRC5DQ9NZD1 345 aa20.31■□□□□ 0.84
DDR1-246ENST00000485023 GNAI3P08754 354 aa20.3■□□□□ 0.84
DDR1-246ENST00000485023 FSTL1Q12841 308 aa20.3■□□□□ 0.84
DDR1-246ENST00000485023 ITPRIPQ8IWB1 547 aa20.3■□□□□ 0.84
DDR1-246ENST00000485023 RCAN3Q9UKA8 241 aa20.3■□□□□ 0.84
DDR1-246ENST00000485023 SCN9AQ15858 1988 aa20.3■□□□□ 0.84
DDR1-246ENST00000485023 RFX5P48382 616 aaPredicted RBP20.29■□□□□ 0.84
DDR1-246ENST00000485023 METTL24Q5JXM2 366 aa20.29■□□□□ 0.84
DDR1-246ENST00000485023 PANK1Q8TE04 598 aa20.29■□□□□ 0.84
DDR1-246ENST00000485023 SIL1Q9H173 461 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms