RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 LIMCH1Q9UPQ0 1083 aa14.3□□□□□ -0.12
SND1-210ENST00000483503 RIPOR2Q9Y4F9 1068 aa14.3□□□□□ -0.12
SND1-210ENST00000483503 CASTP20810 708 aaKnown RBP14.29□□□□□ -0.12
SND1-210ENST00000483503 SSFA2P28290 1259 aa14.29□□□□□ -0.12
SND1-210ENST00000483503 ANKRD1Q15327 319 aa14.29□□□□□ -0.12
SND1-210ENST00000483503 ATP2B3Q16720 1220 aa14.29□□□□□ -0.12
SND1-210ENST00000483503 RC3H1Q5TC82 1133 aaKnown RBP14.29□□□□□ -0.12
SND1-210ENST00000483503 MEX3CQ5U5Q3 659 aaKnown RBP14.29□□□□□ -0.12
SND1-210ENST00000483503 RASEFQ8IZ41 740 aa14.29□□□□□ -0.12
SND1-210ENST00000483503 JAKMIP1Q96N16 626 aaKnown RBP14.29□□□□□ -0.12
SND1-210ENST00000483503 GREM2Q9H772 168 aa14.29□□□□□ -0.12
SND1-210ENST00000483503 SH2B1Q9NRF2 756 aaPredicted RBP14.29□□□□□ -0.12
SND1-210ENST00000483503 PDRG1Q9NUG6 133 aa14.29□□□□□ -0.12
SND1-210ENST00000483503 UBN2Q6ZU65 1347 aa14.29□□□□□ -0.12
SND1-210ENST00000483503 MROH5Q6ZUA9 1318 aa14.29□□□□□ -0.12
SND1-210ENST00000483503 CNTNAP4Q9C0A0 1308 aa14.29□□□□□ -0.12
SND1-210ENST00000483503 RTL9Q8NET4 1388 aa14.29□□□□□ -0.12
SND1-210ENST00000483503 GOLIM4O00461 696 aa14.28□□□□□ -0.12
SND1-210ENST00000483503 SLC27A2O14975 620 aa14.28□□□□□ -0.12
SND1-210ENST00000483503 TAF5LO75529 589 aa14.28□□□□□ -0.12
SND1-210ENST00000483503 CYP2E1P05181 493 aaPredicted RBP14.28□□□□□ -0.12
SND1-210ENST00000483503 COL5A3P25940 1745 aaPredicted RBP14.28□□□□□ -0.12
SND1-210ENST00000483503 CCDC152Q4G0S7 254 aa14.28□□□□□ -0.12
SND1-210ENST00000483503 USPL1Q5W0Q7 1092 aa14.28□□□□□ -0.12
SND1-210ENST00000483503 RUFY3Q7L099 469 aa14.28□□□□□ -0.12
SND1-210ENST00000483503 XAGE2Q96GT9 111 aa14.28□□□□□ -0.12
SND1-210ENST00000483503 ZNF512BQ96KM6 892 aaPredicted RBP14.28□□□□□ -0.12
SND1-210ENST00000483503 ALDH8A1Q9H2A2 487 aaPredicted RBP14.28□□□□□ -0.12
SND1-210ENST00000483503 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.28□□□□□ -0.12
SND1-210ENST00000483503 THSD7AQ9UPZ6 1657 aa14.27□□□□□ -0.12
SND1-210ENST00000483503 RNF113AO15541 343 aaKnown RBP14.27□□□□□ -0.13
SND1-210ENST00000483503 KCNQ2O43526 872 aa14.27□□□□□ -0.13
SND1-210ENST00000483503 TRAK2O60296 914 aa14.27□□□□□ -0.13
SND1-210ENST00000483503 PDIA4P13667 645 aaKnown RBP14.27□□□□□ -0.13
SND1-210ENST00000483503 HSPA1LP34931 641 aa14.27□□□□□ -0.13
SND1-210ENST00000483503 ZMYM1Q5SVZ6 1142 aa14.27□□□□□ -0.13
SND1-210ENST00000483503 SUSD4Q5VX71 490 aa14.27□□□□□ -0.13
SND1-210ENST00000483503 ZSCAN25Q6NSZ9 544 aa14.27□□□□□ -0.13
SND1-210ENST00000483503 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.13
SND1-210ENST00000483503 EDC3Q96F86 508 aaKnown RBP14.27□□□□□ -0.13
SND1-210ENST00000483503 NIP7Q9Y221 180 aaKnown RBP eCLIP14.27□□□□□ -0.13
SND1-210ENST00000483503 RIC1Q4ADV7 1423 aa14.26□□□□□ -0.13
SND1-210ENST00000483503 RPAP1Q9BWH6 1393 aaPredicted RBP14.26□□□□□ -0.13
SND1-210ENST00000483503 UQCRFS1P1P0C7P4 283 aa14.26□□□□□ -0.13
SND1-210ENST00000483503 AK2P54819 239 aa14.26□□□□□ -0.13
SND1-210ENST00000483503 TTF1Q15361 905 aaPredicted RBP14.26□□□□□ -0.13
SND1-210ENST00000483503 BLOC1S2Q6QNY1 142 aa14.26□□□□□ -0.13
SND1-210ENST00000483503 SYNE4Q8N205 404 aa14.26□□□□□ -0.13
SND1-210ENST00000483503 ZGPATQ8N5A5 531 aaKnown RBP14.26□□□□□ -0.13
SND1-210ENST00000483503 CCDC85AQ96PX6 553 aaPredicted RBP14.26□□□□□ -0.13
SND1-210ENST00000483503 DSCC1Q9BVC3 393 aa14.26□□□□□ -0.13
SND1-210ENST00000483503 BCORQ6W2J9 1755 aa14.25□□□□□ -0.13
SND1-210ENST00000483503 PDE8BO95263 885 aa14.25□□□□□ -0.13
SND1-210ENST00000483503 BAG4O95429 457 aaKnown RBP14.25□□□□□ -0.13
SND1-210ENST00000483503 PUM3Q15397 648 aaKnown RBP14.25□□□□□ -0.13
SND1-210ENST00000483503 ZNF589Q86UQ0 364 aaPredicted RBP14.25□□□□□ -0.13
SND1-210ENST00000483503 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.25□□□□□ -0.132e-21■■■■■ 38.6
SND1-210ENST00000483503 LRP5O75197 1615 aa14.25□□□□□ -0.13
SND1-210ENST00000483503 MYH14Q7Z406 1995 aaKnown RBP14.25□□□□□ -0.13
SND1-210ENST00000483503 LAMB2P55268 1798 aa14.24□□□□□ -0.13
SND1-210ENST00000483503 NHSQ6T4R5 1651 aa14.24□□□□□ -0.13
SND1-210ENST00000483503 NTSR2O95665 410 aa14.24□□□□□ -0.13
SND1-210ENST00000483503 HMGB1P09429 215 aaKnown RBP14.24□□□□□ -0.13
SND1-210ENST00000483503 SLC5A1P13866 664 aa14.24□□□□□ -0.13
SND1-210ENST00000483503 IGHMBP2P38935 993 aaKnown RBP14.24□□□□□ -0.13
SND1-210ENST00000483503 NOL8Q76FK4 1167 aaKnown RBP14.24□□□□□ -0.13
SND1-210ENST00000483503 VGLL2Q8N8G2 317 aa14.24□□□□□ -0.13
SND1-210ENST00000483503 LINC00116Q8NCU8 138 aa14.24□□□□□ -0.13
SND1-210ENST00000483503 LPIN2Q92539 896 aa14.24□□□□□ -0.13
SND1-210ENST00000483503 GJD4Q96KN9 370 aaPredicted RBP14.24□□□□□ -0.13
SND1-210ENST00000483503 MPHOSPH8Q99549 860 aa14.24□□□□□ -0.13
SND1-210ENST00000483503 WDR33Q9C0J8 1336 aaKnown RBP14.23□□□□□ -0.13
SND1-210ENST00000483503 RPS6KA4O75676 772 aa14.23□□□□□ -0.13
SND1-210ENST00000483503 HCLS1P14317 486 aaPredicted RBP14.23□□□□□ -0.13
SND1-210ENST00000483503 RPS6KB1P23443 525 aa14.23□□□□□ -0.13
SND1-210ENST00000483503 HMGB2P26583 209 aaKnown RBP14.23□□□□□ -0.13
SND1-210ENST00000483503 ADORA1P30542 326 aa14.23□□□□□ -0.13
SND1-210ENST00000483503 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
SND1-210ENST00000483503 CDC5LQ99459 802 aaKnown RBP14.23□□□□□ -0.13
SND1-210ENST00000483503 NYXQ9GZU5 481 aa14.23□□□□□ -0.13
SND1-210ENST00000483503 CTNNA3Q9UI47 895 aa14.23□□□□□ -0.13
SND1-210ENST00000483503 TRPC5Q9UL62 973 aaPredicted RBP14.23□□□□□ -0.13
SND1-210ENST00000483503 BRD1O95696 1058 aa14.22□□□□□ -0.13
SND1-210ENST00000483503 ADCK5Q3MIX3 580 aa14.22□□□□□ -0.13
SND1-210ENST00000483503 L1TD1Q5T7N2 865 aaKnown RBP14.22□□□□□ -0.13
SND1-210ENST00000483503 CHMP4CQ96CF2 233 aa14.22□□□□□ -0.13
SND1-210ENST00000483503 ISY1Q9ULR0 285 aaKnown RBP14.22□□□□□ -0.13
SND1-210ENST00000483503 SMC3Q9UQE7 1217 aa14.22□□□□□ -0.13
SND1-210ENST00000483503 NDUFB9Q9Y6M9 179 aa14.22□□□□□ -0.13
SND1-210ENST00000483503 AFF2P51816 1311 aa14.21□□□□□ -0.13
SND1-210ENST00000483503 ONECUT3O60422 494 aaPredicted RBP14.21□□□□□ -0.13
SND1-210ENST00000483503 FGFR2P21802 821 aa14.21□□□□□ -0.13
SND1-210ENST00000483503 ARID4AP29374 1257 aaPredicted RBP14.21□□□□□ -0.13
SND1-210ENST00000483503 APPBP2Q92624 585 aa14.21□□□□□ -0.13
SND1-210ENST00000483503 NARFQ9UHQ1 456 aa14.21□□□□□ -0.13
SND1-210ENST00000483503 ATRNO75882 1429 aa14.21□□□□□ -0.13
SND1-210ENST00000483503 BTAF1O14981 1849 aa14.2□□□□□ -0.14
SND1-210ENST00000483503 FAM177BA6PVY3 158 aa14.2□□□□□ -0.14
SND1-210ENST00000483503 ZPR1O75312 459 aa14.2□□□□□ -0.14
SND1-210ENST00000483503 ZAP70P43403 619 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 250.4 ms