RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
HDAC1-208ENST00000482310 MTX1Q13505 466 aa16.45■□□□□ 0.22
HDAC1-208ENST00000482310 LDHAL6AQ6ZMR3 332 aa16.45■□□□□ 0.22
HDAC1-208ENST00000482310 SBF1O95248 1867 aa16.45■□□□□ 0.22
HDAC1-208ENST00000482310 POLA2Q14181 598 aa16.44■□□□□ 0.22
HDAC1-208ENST00000482310 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
HDAC1-208ENST00000482310 TMX4Q9H1E5 349 aaPredicted RBP16.44■□□□□ 0.22
HDAC1-208ENST00000482310 HMMRO75330 724 aa16.43■□□□□ 0.22
HDAC1-208ENST00000482310 SURF6O75683 361 aaKnown RBP16.43■□□□□ 0.22
HDAC1-208ENST00000482310 BBOX1O75936 387 aa16.43■□□□□ 0.22
HDAC1-208ENST00000482310 RPAP2Q8IXW5 612 aaPredicted RBP16.43■□□□□ 0.22
HDAC1-208ENST00000482310 SSH3Q8TE77 659 aa16.43■□□□□ 0.22
HDAC1-208ENST00000482310 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
HDAC1-208ENST00000482310 ANKIB1Q9P2G1 1089 aa16.43■□□□□ 0.22
HDAC1-208ENST00000482310 EXOC6BQ9Y2D4 811 aa16.43■□□□□ 0.22
HDAC1-208ENST00000482310 ATP6V0A2Q9Y487 856 aa16.43■□□□□ 0.22
HDAC1-208ENST00000482310 CEP350Q5VT06 3117 aa16.43■□□□□ 0.22
HDAC1-208ENST00000482310 TAF5LO75529 589 aa16.42■□□□□ 0.22
HDAC1-208ENST00000482310 GPSM2P81274 684 aa16.42■□□□□ 0.22
HDAC1-208ENST00000482310 CHRNDQ07001 517 aa16.42■□□□□ 0.22
HDAC1-208ENST00000482310 METTL24Q5JXM2 366 aa16.42■□□□□ 0.22
HDAC1-208ENST00000482310 GPR101Q96P66 508 aaPredicted RBP16.42■□□□□ 0.22
HDAC1-208ENST00000482310 DUOX1Q9NRD9 1551 aa16.42■□□□□ 0.22
HDAC1-208ENST00000482310 ARAP2Q8WZ64 1704 aa16.42■□□□□ 0.22
HDAC1-208ENST00000482310 DICER1Q9UPY3 1922 aaKnown RBP16.41■□□□□ 0.22
HDAC1-208ENST00000482310 EYA2O00167 538 aa16.41■□□□□ 0.22
HDAC1-208ENST00000482310 RASSF7Q02833 373 aa16.41■□□□□ 0.22
HDAC1-208ENST00000482310 G3BP1Q13283 466 aaKnown RBP eCLIP16.41■□□□□ 0.22
HDAC1-208ENST00000482310 CCDC93Q567U6 631 aa16.41■□□□□ 0.22
HDAC1-208ENST00000482310 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
HDAC1-208ENST00000482310 SP8Q8IXZ3 490 aa16.41■□□□□ 0.22
HDAC1-208ENST00000482310 COPRSQ9NQ92 184 aa16.41■□□□□ 0.22
HDAC1-208ENST00000482310 MINPP1Q9UNW1 487 aa16.41■□□□□ 0.22
HDAC1-208ENST00000482310 NSFL1CQ9UNZ2 370 aaKnown RBP16.41■□□□□ 0.22
HDAC1-208ENST00000482310 TIAM2Q8IVF5 1701 aa16.41■□□□□ 0.22
HDAC1-208ENST00000482310 SNAP23O00161 211 aa16.4■□□□□ 0.22
HDAC1-208ENST00000482310 ATG9AQ7Z3C6 839 aa16.4■□□□□ 0.22
HDAC1-208ENST00000482310 TMC4Q7Z404 712 aa16.4■□□□□ 0.22
HDAC1-208ENST00000482310 WTIPA6NIX2 430 aaPredicted RBP16.39■□□□□ 0.21
HDAC1-208ENST00000482310 C6orf229H3BNL8 230 aa16.39■□□□□ 0.21
HDAC1-208ENST00000482310 UFL1O94874 794 aa16.39■□□□□ 0.21
HDAC1-208ENST00000482310 KCNJ4P48050 445 aa16.39■□□□□ 0.21
HDAC1-208ENST00000482310 DPP8Q6V1X1 898 aaPredicted RBP16.39■□□□□ 0.21
HDAC1-208ENST00000482310 MPNDQ8N594 471 aa16.39■□□□□ 0.21
HDAC1-208ENST00000482310 C7orf43Q8WVR3 580 aa16.39■□□□□ 0.21
HDAC1-208ENST00000482310 RIPOR2Q9Y4F9 1068 aa16.39■□□□□ 0.21
HDAC1-208ENST00000482310 GRIN3BO60391 1043 aa16.38■□□□□ 0.21
HDAC1-208ENST00000482310 TFCP2Q12800 502 aa16.38■□□□□ 0.21
HDAC1-208ENST00000482310 AAMPQ13685 434 aa16.38■□□□□ 0.21
HDAC1-208ENST00000482310 XDHP47989 1333 aa16.38■□□□□ 0.21
HDAC1-208ENST00000482310 MROH5Q6ZUA9 1318 aa16.38■□□□□ 0.21
HDAC1-208ENST00000482310 RIMBP2O15034 1052 aa16.37■□□□□ 0.21
HDAC1-208ENST00000482310 CIAO1O76071 339 aa16.37■□□□□ 0.21
HDAC1-208ENST00000482310 IGHDP01880 384 aa16.37■□□□□ 0.21
HDAC1-208ENST00000482310 IL15P40933 162 aaPredicted RBP16.37■□□□□ 0.21
HDAC1-208ENST00000482310 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
HDAC1-208ENST00000482310 GGA1Q9UJY5 639 aa16.37■□□□□ 0.21
HDAC1-208ENST00000482310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.37■□□□□ 0.21
HDAC1-208ENST00000482310 SNED1Q8TER0 1413 aa16.36■□□□□ 0.21
HDAC1-208ENST00000482310 SMARCA5O60264 1052 aaPredicted RBP16.36■□□□□ 0.21
HDAC1-208ENST00000482310 ANKRD2Q9GZV1 360 aa16.36■□□□□ 0.21
HDAC1-208ENST00000482310 TAOK3Q9H2K8 898 aa16.36■□□□□ 0.21
HDAC1-208ENST00000482310 IL1RAPL2Q9NP60 686 aa16.36■□□□□ 0.21
HDAC1-208ENST00000482310 ZNF277Q9NRM2 450 aaPredicted RBP16.36■□□□□ 0.21
HDAC1-208ENST00000482310 CEP126Q9P2H0 1117 aa16.36■□□□□ 0.21
HDAC1-208ENST00000482310 POLLQ9UGP5 575 aa16.36■□□□□ 0.21
HDAC1-208ENST00000482310 NFKBIEO00221 500 aa16.35■□□□□ 0.21
HDAC1-208ENST00000482310 SASH1O94885 1247 aa16.35■□□□□ 0.21
HDAC1-208ENST00000482310 KLRK1P26718 216 aa16.35■□□□□ 0.21
HDAC1-208ENST00000482310 CC2D2BQ6DHV5 1058 aa16.35■□□□□ 0.21
HDAC1-208ENST00000482310 B4GALNT3Q6L9W6 998 aa16.35■□□□□ 0.21
HDAC1-208ENST00000482310 RTKN2Q8IZC4 609 aa16.35■□□□□ 0.21
HDAC1-208ENST00000482310 TBC1D16Q8TBP0 767 aa16.35■□□□□ 0.21
HDAC1-208ENST00000482310 RWDD1Q9H446 243 aaPredicted RBP16.35■□□□□ 0.21
HDAC1-208ENST00000482310 ZNF609O15014 1411 aa16.35■□□□□ 0.21
HDAC1-208ENST00000482310 FKBP4Q02790 459 aaKnown RBP eCLIP16.34■□□□□ 0.21
HDAC1-208ENST00000482310 HDAC1Q13547 482 aaPredicted RBP16.34■□□□□ 0.21
HDAC1-208ENST00000482310 AOC3Q16853 763 aa16.34■□□□□ 0.21
HDAC1-208ENST00000482310 VGLL2Q8N8G2 317 aa16.34■□□□□ 0.21
HDAC1-208ENST00000482310 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
HDAC1-208ENST00000482310 FBXO3Q9UK99 471 aa16.34■□□□□ 0.21
HDAC1-208ENST00000482310 NOP58Q9Y2X3 529 aaKnown RBP16.34■□□□□ 0.21
HDAC1-208ENST00000482310 SCN9AQ15858 1988 aa16.34■□□□□ 0.21
HDAC1-208ENST00000482310 ZNF804BA4D1E1 1349 aa16.34■□□□□ 0.21
HDAC1-208ENST00000482310 PDE8BO95263 885 aa16.33■□□□□ 0.2
HDAC1-208ENST00000482310 ATP2B4P23634 1241 aa16.33■□□□□ 0.2
HDAC1-208ENST00000482310 ATP2B3Q16720 1220 aa16.33■□□□□ 0.2
HDAC1-208ENST00000482310 HSP90AB4PQ58FF6 505 aa16.33■□□□□ 0.2
HDAC1-208ENST00000482310 NEUROD6Q96NK8 337 aa16.33■□□□□ 0.2
HDAC1-208ENST00000482310 COL4A5P29400 1685 aa16.33■□□□□ 0.2
HDAC1-208ENST00000482310 PPIP5K2O43314 1243 aa16.32■□□□□ 0.2
HDAC1-208ENST00000482310 PSME4Q14997 1843 aa16.32■□□□□ 0.2
HDAC1-208ENST00000482310 PUM3Q15397 648 aaKnown RBP16.32■□□□□ 0.2
HDAC1-208ENST00000482310 ERC1Q8IUD2 1116 aa16.32■□□□□ 0.2
HDAC1-208ENST00000482310 RHPN1Q8TCX5 695 aa16.32■□□□□ 0.2
HDAC1-208ENST00000482310 DCTPP1Q9H773 170 aa16.32■□□□□ 0.2
HDAC1-208ENST00000482310 PODXL2Q9NZ53 605 aa16.32■□□□□ 0.2
HDAC1-208ENST00000482310 MYO5AQ9Y4I1 1855 aaKnown RBP16.31■□□□□ 0.2
HDAC1-208ENST00000482310 G3V3G9 751 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 SLC5A1P13866 664 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms