RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 DPP8Q6V1X1 898 aaPredicted RBP24.66■■□□□ 1.54
LIME1-205ENST00000480139 SUPT20HQ8NEM7 779 aa24.66■■□□□ 1.54
LIME1-205ENST00000480139 MINPP1Q9UNW1 487 aa24.66■■□□□ 1.54
LIME1-205ENST00000480139 RFX5P48382 616 aaPredicted RBP24.65■■□□□ 1.54
LIME1-205ENST00000480139 PRELPP51888 382 aa24.65■■□□□ 1.54
LIME1-205ENST00000480139 GPSM2P81274 684 aa24.65■■□□□ 1.54
LIME1-205ENST00000480139 VPS33BQ9H267 617 aa24.65■■□□□ 1.54
LIME1-205ENST00000480139 XDHP47989 1333 aa24.64■■□□□ 1.54
LIME1-205ENST00000480139 TIAM2Q8IVF5 1701 aa24.64■■□□□ 1.54
LIME1-205ENST00000480139 LDHAL6AQ6ZMR3 332 aa24.64■■□□□ 1.54
LIME1-205ENST00000480139 ZNF594Q96JF6 807 aaPredicted RBP24.64■■□□□ 1.54
LIME1-205ENST00000480139 ZBTB40Q9NUA8 1239 aa24.64■■□□□ 1.54
LIME1-205ENST00000480139 NSFL1CQ9UNZ2 370 aaKnown RBP24.64■■□□□ 1.54
LIME1-205ENST00000480139 ANKRD2Q9GZV1 360 aa24.63■■□□□ 1.53
LIME1-205ENST00000480139 FBXO3Q9UK99 471 aa24.63■■□□□ 1.53
LIME1-205ENST00000480139 SRGAP3O43295 1099 aa24.62■■□□□ 1.53
LIME1-205ENST00000480139 PTPN12Q05209 780 aaKnown RBP24.62■■□□□ 1.53
LIME1-205ENST00000480139 ANKIB1Q9P2G1 1089 aa24.62■■□□□ 1.53
LIME1-205ENST00000480139 ZC3H4Q9UPT8 1303 aaKnown RBP24.61■■□□□ 1.53
LIME1-205ENST00000480139 IARSP41252 1262 aaKnown RBP24.61■■□□□ 1.53
LIME1-205ENST00000480139 C9orf131Q5VYM1 1079 aa24.61■■□□□ 1.53
LIME1-205ENST00000480139 ZNF277Q9NRM2 450 aaPredicted RBP24.61■■□□□ 1.53
LIME1-205ENST00000480139 CNNM1Q9NRU3 951 aa24.61■■□□□ 1.53
LIME1-205ENST00000480139 RNF181Q9P0P0 153 aa24.61■■□□□ 1.53
LIME1-205ENST00000480139 ATP8B2P98198 1209 aa24.6■■□□□ 1.53
LIME1-205ENST00000480139 CHRNDQ07001 517 aa24.6■■□□□ 1.53
LIME1-205ENST00000480139 TBC1D16Q8TBP0 767 aa24.6■■□□□ 1.53
LIME1-205ENST00000480139 C1orf115Q9H7X2 142 aa24.6■■□□□ 1.53
LIME1-205ENST00000480139 COPRSQ9NQ92 184 aa24.6■■□□□ 1.53
LIME1-205ENST00000480139 GGA1Q9UJY5 639 aa24.6■■□□□ 1.53
LIME1-205ENST00000480139 RIPOR2Q9Y4F9 1068 aa24.6■■□□□ 1.53
LIME1-205ENST00000480139 SUPT16HQ9Y5B9 1047 aaKnown RBP24.6■■□□□ 1.53
LIME1-205ENST00000480139 ATP2B4P23634 1241 aa24.59■■□□□ 1.53
LIME1-205ENST00000480139 KLHDC4Q8TBB5 520 aa24.59■■□□□ 1.53
LIME1-205ENST00000480139 POLLQ9UGP5 575 aa24.59■■□□□ 1.53
LIME1-205ENST00000480139 MROH5Q6ZUA9 1318 aa24.59■■□□□ 1.53
LIME1-205ENST00000480139 PNMA6EA0A0J9YXQ4 647 aa24.58■■□□□ 1.53
LIME1-205ENST00000480139 EYA2O00167 538 aa24.58■■□□□ 1.53
LIME1-205ENST00000480139 CIAO1O76071 339 aa24.58■■□□□ 1.53
LIME1-205ENST00000480139 KIAA2012Q0VF49 1180 aa24.58■■□□□ 1.53
LIME1-205ENST00000480139 CEP85Q6P2H3 762 aa24.58■■□□□ 1.53
LIME1-205ENST00000480139 SSH3Q8TE77 659 aa24.58■■□□□ 1.53
LIME1-205ENST00000480139 EYA3Q99504 573 aa24.58■■□□□ 1.53
LIME1-205ENST00000480139 PUS3Q9BZE2 481 aaKnown RBP24.58■■□□□ 1.53
LIME1-205ENST00000480139 LEMD3Q9Y2U8 911 aa24.58■■□□□ 1.53
LIME1-205ENST00000480139 UFL1O94874 794 aa24.57■■□□□ 1.52
LIME1-205ENST00000480139 POLA2Q14181 598 aa24.57■■□□□ 1.52
LIME1-205ENST00000480139 COL4A5P29400 1685 aa24.56■■□□□ 1.52
LIME1-205ENST00000480139 C6orf229H3BNL8 230 aa24.56■■□□□ 1.52
LIME1-205ENST00000480139 PPIP5K2O43314 1243 aa24.56■■□□□ 1.52
LIME1-205ENST00000480139 WASHC4Q2M389 1173 aa24.56■■□□□ 1.52
LIME1-205ENST00000480139 LRRC24Q50LG9 513 aa24.56■■□□□ 1.52
LIME1-205ENST00000480139 RPAP2Q8IXW5 612 aaPredicted RBP24.56■■□□□ 1.52
LIME1-205ENST00000480139 MED23Q9ULK4 1368 aa24.55■■□□□ 1.52
LIME1-205ENST00000480139 LARGE2Q8N3Y3 721 aa24.55■■□□□ 1.52
LIME1-205ENST00000480139 ZNF804BA4D1E1 1349 aa24.55■■□□□ 1.52
LIME1-205ENST00000480139 AOC3Q16853 763 aa24.54■■□□□ 1.52
LIME1-205ENST00000480139 ATG9AQ7Z3C6 839 aa24.54■■□□□ 1.52
LIME1-205ENST00000480139 IL15P40933 162 aaPredicted RBP24.53■■□□□ 1.52
LIME1-205ENST00000480139 VGLL2Q8N8G2 317 aa24.53■■□□□ 1.52
LIME1-205ENST00000480139 JDP2Q8WYK2 163 aa24.53■■□□□ 1.52
LIME1-205ENST00000480139 CRBNQ96SW2 442 aa24.53■■□□□ 1.52
LIME1-205ENST00000480139 PA2G4Q9UQ80 394 aaKnown RBP24.53■■□□□ 1.52
LIME1-205ENST00000480139 TAF5LO75529 589 aa24.52■■□□□ 1.52
LIME1-205ENST00000480139 AAMPQ13685 434 aa24.52■■□□□ 1.52
LIME1-205ENST00000480139 METTL24Q5JXM2 366 aa24.52■■□□□ 1.52
LIME1-205ENST00000480139 C15orf52Q6ZUT6 534 aaKnown RBP24.52■■□□□ 1.52
LIME1-205ENST00000480139 HELBQ8NG08 1087 aaPredicted RBP24.52■■□□□ 1.52
LIME1-205ENST00000480139 ZC3H12CQ9C0D7 883 aaKnown RBP24.52■■□□□ 1.52
LIME1-205ENST00000480139 SIL1Q9H173 461 aa24.52■■□□□ 1.52
LIME1-205ENST00000480139 PDE8BO95263 885 aa24.51■■□□□ 1.51
LIME1-205ENST00000480139 KCNJ4P48050 445 aa24.51■■□□□ 1.51
LIME1-205ENST00000480139 UBE4AQ14139 1066 aa24.51■■□□□ 1.51
LIME1-205ENST00000480139 NIM1KQ8IY84 436 aa24.51■■□□□ 1.51
LIME1-205ENST00000480139 FZD9O00144 591 aa24.5■■□□□ 1.51
LIME1-205ENST00000480139 YY1P25490 414 aa24.5■■□□□ 1.51
LIME1-205ENST00000480139 NOP58Q9Y2X3 529 aaKnown RBP24.5■■□□□ 1.51
LIME1-205ENST00000480139 IRS2Q9Y4H2 1338 aa24.5■■□□□ 1.51
LIME1-205ENST00000480139 WTIPA6NIX2 430 aaPredicted RBP24.49■■□□□ 1.51
LIME1-205ENST00000480139 HMMRO75330 724 aa24.49■■□□□ 1.51
LIME1-205ENST00000480139 GPR101Q96P66 508 aaPredicted RBP24.49■■□□□ 1.51
LIME1-205ENST00000480139 RIMBP2O15034 1052 aa24.48■■□□□ 1.51
LIME1-205ENST00000480139 SIRT2Q8IXJ6 389 aa24.48■■□□□ 1.51
LIME1-205ENST00000480139 ZNRF3Q9ULT6 936 aa24.48■■□□□ 1.51
LIME1-205ENST00000480139 PSME4Q14997 1843 aa24.47■■□□□ 1.51
LIME1-205ENST00000480139 PUM3Q15397 648 aaKnown RBP24.47■■□□□ 1.51
LIME1-205ENST00000480139 CEP126Q9P2H0 1117 aa24.47■■□□□ 1.51
LIME1-205ENST00000480139 ARAP2Q8WZ64 1704 aa24.47■■□□□ 1.51
LIME1-205ENST00000480139 FGFR2P21802 821 aa24.46■■□□□ 1.51
LIME1-205ENST00000480139 G3BP1Q13283 466 aaKnown RBP eCLIP24.46■■□□□ 1.51
LIME1-205ENST00000480139 SNAP23O00161 211 aa24.45■■□□□ 1.5
LIME1-205ENST00000480139 SURF6O75683 361 aaKnown RBP24.45■■□□□ 1.5
LIME1-205ENST00000480139 EIF6P56537 245 aaKnown RBP24.45■■□□□ 1.5
LIME1-205ENST00000480139 TXNRD3Q86VQ6 643 aa24.45■■□□□ 1.5
LIME1-205ENST00000480139 GLTPD2A6NH11 291 aa24.44■■□□□ 1.5
LIME1-205ENST00000480139 ECE2O60344 883 aa24.44■■□□□ 1.5
LIME1-205ENST00000480139 KLRK1P26718 216 aa24.44■■□□□ 1.5
LIME1-205ENST00000480139 DPY19L2Q6NUT2 758 aa24.44■■□□□ 1.5
LIME1-205ENST00000480139 PODNQ7Z5L7 613 aa24.44■■□□□ 1.5
LIME1-205ENST00000480139 LPIN2Q92539 896 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms