RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 KDM2BQ8NHM5 1336 aa19.09■□□□□ 0.65
SEC13-215ENST00000477547 PNMA6EA0A0J9YXQ4 647 aa19.09■□□□□ 0.65
SEC13-215ENST00000477547 ALDH1B1P30837 517 aa19.09■□□□□ 0.65
SEC13-215ENST00000477547 ANKRD18AQ8IVF6 992 aa19.09■□□□□ 0.65
SEC13-215ENST00000477547 TTLL6Q8N841 843 aa19.09■□□□□ 0.65
SEC13-215ENST00000477547 IGHMBP2P38935 993 aaKnown RBP19.08■□□□□ 0.65
SEC13-215ENST00000477547 AAMPQ13685 434 aa19.08■□□□□ 0.65
SEC13-215ENST00000477547 ARAP2Q8WZ64 1704 aa19.08■□□□□ 0.64
SEC13-215ENST00000477547 CCDC88AQ3V6T2 1871 aa19.07■□□□□ 0.64
SEC13-215ENST00000477547 DALRD3Q5D0E6 543 aaKnown RBP19.07■□□□□ 0.64
SEC13-215ENST00000477547 ZNF594Q96JF6 807 aaPredicted RBP19.07■□□□□ 0.64
SEC13-215ENST00000477547 DUOX1Q9NRD9 1551 aa19.07■□□□□ 0.64
SEC13-215ENST00000477547 HSPA1AP0DMV8 641 aaKnown RBP19.06■□□□□ 0.64
SEC13-215ENST00000477547 HSPA1BP0DMV9 641 aaKnown RBP19.06■□□□□ 0.64
SEC13-215ENST00000477547 RFX5P48382 616 aaPredicted RBP19.06■□□□□ 0.64
SEC13-215ENST00000477547 RPS8P62241 208 aaKnown RBP19.06■□□□□ 0.64
SEC13-215ENST00000477547 ATP8B2P98198 1209 aa19.06■□□□□ 0.64
SEC13-215ENST00000477547 RPAP2Q8IXW5 612 aaPredicted RBP19.06■□□□□ 0.64
SEC13-215ENST00000477547 KLHDC4Q8TBB5 520 aa19.06■□□□□ 0.64
SEC13-215ENST00000477547 MPHOSPH8Q99549 860 aa19.06■□□□□ 0.64
SEC13-215ENST00000477547 HMMRO75330 724 aa19.05■□□□□ 0.64
SEC13-215ENST00000477547 POLA2Q14181 598 aa19.05■□□□□ 0.64
SEC13-215ENST00000477547 TMC4Q7Z404 712 aa19.05■□□□□ 0.64
SEC13-215ENST00000477547 SLC51AQ86UW1 340 aa19.05■□□□□ 0.64
SEC13-215ENST00000477547 SMC1BQ8NDV3 1235 aa19.05■□□□□ 0.64
SEC13-215ENST00000477547 SSH3Q8TE77 659 aa19.05■□□□□ 0.64
SEC13-215ENST00000477547 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
SEC13-215ENST00000477547 SBF1O95248 1867 aa19.05■□□□□ 0.64
SEC13-215ENST00000477547 BBOX1O75936 387 aa19.04■□□□□ 0.64
SEC13-215ENST00000477547 PTPN12Q05209 780 aaKnown RBP19.04■□□□□ 0.64
SEC13-215ENST00000477547 SIL1Q9H173 461 aa19.04■□□□□ 0.64
SEC13-215ENST00000477547 PA2G4Q9UQ80 394 aaKnown RBP19.04■□□□□ 0.64
SEC13-215ENST00000477547 PCDHB15Q9Y5E8 787 aa19.04■□□□□ 0.64
SEC13-215ENST00000477547 SNED1Q8TER0 1413 aa19.04■□□□□ 0.64
SEC13-215ENST00000477547 SIRT2Q8IXJ6 389 aa19.03■□□□□ 0.64
SEC13-215ENST00000477547 COPRSQ9NQ92 184 aa19.03■□□□□ 0.64
SEC13-215ENST00000477547 CNNM1Q9NRU3 951 aa19.03■□□□□ 0.64
SEC13-215ENST00000477547 ATP6V0A2Q9Y487 856 aa19.03■□□□□ 0.64
SEC13-215ENST00000477547 MYH13Q9UKX3 1938 aa19.03■□□□□ 0.64
SEC13-215ENST00000477547 TIAM2Q8IVF5 1701 aa19.03■□□□□ 0.64
SEC13-215ENST00000477547 C21orf2O43822 256 aa19.02■□□□□ 0.64
SEC13-215ENST00000477547 OLFM4Q6UX06 510 aa19.02■□□□□ 0.64
SEC13-215ENST00000477547 LDHAL6AQ6ZMR3 332 aa19.02■□□□□ 0.64
SEC13-215ENST00000477547 BSDC1Q9NW68 430 aaPredicted RBP19.02■□□□□ 0.64
SEC13-215ENST00000477547 DICER1Q9UPY3 1922 aaKnown RBP19.02■□□□□ 0.64
SEC13-215ENST00000477547 RASSF7Q02833 373 aa19.01■□□□□ 0.63
SEC13-215ENST00000477547 CCDC93Q567U6 631 aa19.01■□□□□ 0.63
SEC13-215ENST00000477547 PUS3Q9BZE2 481 aaKnown RBP19.01■□□□□ 0.63
SEC13-215ENST00000477547 TMX4Q9H1E5 349 aaPredicted RBP19.01■□□□□ 0.63
SEC13-215ENST00000477547 EYA2O00167 538 aa19■□□□□ 0.63
SEC13-215ENST00000477547 LRRC24Q50LG9 513 aa19■□□□□ 0.63
SEC13-215ENST00000477547 SOGA3Q5TF21 947 aa19■□□□□ 0.63
SEC13-215ENST00000477547 SP8Q8IXZ3 490 aa19■□□□□ 0.63
SEC13-215ENST00000477547 C7orf43Q8WVR3 580 aa19■□□□□ 0.63
SEC13-215ENST00000477547 CIAO1O76071 339 aa19■□□□□ 0.63
SEC13-215ENST00000477547 OS9Q13438 667 aaPredicted RBP19■□□□□ 0.63
SEC13-215ENST00000477547 CC2D2BQ6DHV5 1058 aa19■□□□□ 0.63
SEC13-215ENST00000477547 FBXO3Q9UK99 471 aa19■□□□□ 0.63
SEC13-215ENST00000477547 SURF6O75683 361 aaKnown RBP18.99■□□□□ 0.63
SEC13-215ENST00000477547 CHRNDQ07001 517 aa18.99■□□□□ 0.63
SEC13-215ENST00000477547 MINPP1Q9UNW1 487 aa18.99■□□□□ 0.63
SEC13-215ENST00000477547 EXOC6BQ9Y2D4 811 aa18.99■□□□□ 0.63
SEC13-215ENST00000477547 XDHP47989 1333 aa18.98■□□□□ 0.63
SEC13-215ENST00000477547 MROH5Q6ZUA9 1318 aa18.98■□□□□ 0.63
SEC13-215ENST00000477547 ZNF609O15014 1411 aa18.98■□□□□ 0.63
SEC13-215ENST00000477547 IL15P40933 162 aaPredicted RBP18.98■□□□□ 0.63
SEC13-215ENST00000477547 GPSM2P81274 684 aa18.98■□□□□ 0.63
SEC13-215ENST00000477547 METTL24Q5JXM2 366 aa18.98■□□□□ 0.63
SEC13-215ENST00000477547 ATG9AQ7Z3C6 839 aa18.98■□□□□ 0.63
SEC13-215ENST00000477547 RIPOR2Q9Y4F9 1068 aa18.98■□□□□ 0.63
SEC13-215ENST00000477547 G3BP1Q13283 466 aaKnown RBP eCLIP18.97■□□□□ 0.632e-9■■■□□ 17.5
SEC13-215ENST00000477547 HDAC1Q13547 482 aaPredicted RBP18.97■□□□□ 0.63
SEC13-215ENST00000477547 DPP8Q6V1X1 898 aaPredicted RBP18.97■□□□□ 0.63
SEC13-215ENST00000477547 ANKRD2Q9GZV1 360 aa18.97■□□□□ 0.63
SEC13-215ENST00000477547 ANKIB1Q9P2G1 1089 aa18.97■□□□□ 0.63
SEC13-215ENST00000477547 NSFL1CQ9UNZ2 370 aaKnown RBP18.97■□□□□ 0.63
SEC13-215ENST00000477547 MPNDQ8N594 471 aa18.96■□□□□ 0.63
SEC13-215ENST00000477547 HELBQ8NG08 1087 aaPredicted RBP18.96■□□□□ 0.63
SEC13-215ENST00000477547 NOP58Q9Y2X3 529 aaKnown RBP18.96■□□□□ 0.63
SEC13-215ENST00000477547 PSME4Q14997 1843 aa18.95■□□□□ 0.62
SEC13-215ENST00000477547 UFL1O94874 794 aa18.95■□□□□ 0.62
SEC13-215ENST00000477547 VEGFAP15692 232 aaPredicted RBP18.95■□□□□ 0.62
SEC13-215ENST00000477547 GRIPAP1Q4V328 841 aa18.95■□□□□ 0.62
SEC13-215ENST00000477547 HSP90AB4PQ58FF6 505 aa18.95■□□□□ 0.62
SEC13-215ENST00000477547 RTKN2Q8IZC4 609 aa18.95■□□□□ 0.62
SEC13-215ENST00000477547 VGLL2Q8N8G2 317 aa18.95■□□□□ 0.62
SEC13-215ENST00000477547 TAOK3Q9H2K8 898 aa18.95■□□□□ 0.62
SEC13-215ENST00000477547 GLTPD2A6NH11 291 aa18.94■□□□□ 0.62
SEC13-215ENST00000477547 APBB1O00213 710 aa18.94■□□□□ 0.62
SEC13-215ENST00000477547 NFKBIEO00221 500 aa18.94■□□□□ 0.62
SEC13-215ENST00000477547 TAF5LO75529 589 aa18.94■□□□□ 0.62
SEC13-215ENST00000477547 KCNJ4P48050 445 aa18.94■□□□□ 0.62
SEC13-215ENST00000477547 ERC1Q8IUD2 1116 aa18.94■□□□□ 0.62
SEC13-215ENST00000477547 RWDD1Q9H446 243 aaPredicted RBP18.94■□□□□ 0.62
SEC13-215ENST00000477547 PODXL2Q9NZ53 605 aa18.94■□□□□ 0.62
SEC13-215ENST00000477547 GGA1Q9UJY5 639 aa18.94■□□□□ 0.62
SEC13-215ENST00000477547 FKBP4Q02790 459 aaKnown RBP eCLIP18.93■□□□□ 0.62
SEC13-215ENST00000477547 CEP126Q9P2H0 1117 aa18.93■□□□□ 0.62
SEC13-215ENST00000477547 LTBP3Q9NS15 1303 aa18.93■□□□□ 0.62
SEC13-215ENST00000477547 C6orf229H3BNL8 230 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms