RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 HPS5Q9UPZ3 1129 aa16.3■□□□□ 0.2
TRIM13-207ENST00000474805 RASAL3Q86YV0 1011 aa16.29■□□□□ 0.2
TRIM13-207ENST00000474805 FAM89AQ96GI7 184 aa16.29■□□□□ 0.2
TRIM13-207ENST00000474805 EYA3Q99504 573 aa16.29■□□□□ 0.2
TRIM13-207ENST00000474805 VIL1P09327 827 aaKnown RBP16.28■□□□□ 0.2
TRIM13-207ENST00000474805 SF3B3Q15393 1217 aaKnown RBP16.28■□□□□ 0.2
TRIM13-207ENST00000474805 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
TRIM13-207ENST00000474805 TBC1D16Q8TBP0 767 aa16.28■□□□□ 0.2
TRIM13-207ENST00000474805 RIPK4P57078 832 aa16.27■□□□□ 0.2
TRIM13-207ENST00000474805 ANGEL2Q5VTE6 544 aaKnown RBP16.27■□□□□ 0.2
TRIM13-207ENST00000474805 REM2Q8IYK8 340 aaPredicted RBP16.27■□□□□ 0.2
TRIM13-207ENST00000474805 ZC3H12CQ9C0D7 883 aaKnown RBP16.27■□□□□ 0.2
TRIM13-207ENST00000474805 PNNQ9H307 717 aaKnown RBP16.27■□□□□ 0.2
TRIM13-207ENST00000474805 ATP5J2-PTCD1G3V325 749 aa16.26■□□□□ 0.19
TRIM13-207ENST00000474805 TBC1D8O95759 1140 aa16.26■□□□□ 0.19
TRIM13-207ENST00000474805 SCARF1Q14162 830 aa16.26■□□□□ 0.19
TRIM13-207ENST00000474805 KRT24Q2M2I5 525 aa16.26■□□□□ 0.19
TRIM13-207ENST00000474805 MOB2Q70IA6 237 aa16.26■□□□□ 0.19
TRIM13-207ENST00000474805 HDAC9Q9UKV0 1011 aa16.26■□□□□ 0.19
TRIM13-207ENST00000474805 PSME4Q14997 1843 aa16.25■□□□□ 0.19
TRIM13-207ENST00000474805 G3V3G9 751 aa16.25■□□□□ 0.19
TRIM13-207ENST00000474805 RPS8P62241 208 aaKnown RBP16.25■□□□□ 0.19
TRIM13-207ENST00000474805 DCAF8Q5TAQ9 597 aa16.25■□□□□ 0.19
TRIM13-207ENST00000474805 ZNF296Q8WUU4 475 aaPredicted RBP16.25■□□□□ 0.19
TRIM13-207ENST00000474805 ISCA1Q9BUE6 129 aa16.25■□□□□ 0.19
TRIM13-207ENST00000474805 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
TRIM13-207ENST00000474805 CHPF2Q9P2E5 772 aa16.25■□□□□ 0.19
TRIM13-207ENST00000474805 SCAF8Q9UPN6 1271 aaKnown RBP16.25■□□□□ 0.19
TRIM13-207ENST00000474805 PAPPA2Q9BXP8 1791 aa16.24■□□□□ 0.19
TRIM13-207ENST00000474805 PKN2Q16513 984 aaKnown RBP16.24■□□□□ 0.19
TRIM13-207ENST00000474805 ANKRD13DQ6ZTN6 518 aa16.24■□□□□ 0.19
TRIM13-207ENST00000474805 PLBD2Q8NHP8 589 aa16.24■□□□□ 0.19
TRIM13-207ENST00000474805 UBE2Q2LH0YL09 131 aa16.23■□□□□ 0.19
TRIM13-207ENST00000474805 ZNF280AP59817 542 aaPredicted RBP16.23■□□□□ 0.19
TRIM13-207ENST00000474805 FKBP1BP68106 108 aa16.23■□□□□ 0.19
TRIM13-207ENST00000474805 IRS4O14654 1257 aaPredicted RBP16.22■□□□□ 0.19
TRIM13-207ENST00000474805 UFL1O94874 794 aa16.22■□□□□ 0.19
TRIM13-207ENST00000474805 PRAMEF18Q5VWM3 479 aa16.22■□□□□ 0.19
TRIM13-207ENST00000474805 RSBN1LQ6PCB5 846 aaPredicted RBP16.22■□□□□ 0.19
TRIM13-207ENST00000474805 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
TRIM13-207ENST00000474805 PODXL2Q9NZ53 605 aa16.22■□□□□ 0.19
TRIM13-207ENST00000474805 ANKIB1Q9P2G1 1089 aa16.22■□□□□ 0.19
TRIM13-207ENST00000474805 TMPOP42166 694 aaKnown RBP16.21■□□□□ 0.19
TRIM13-207ENST00000474805 AGBL3Q8NEM8 1001 aa16.21■□□□□ 0.19
TRIM13-207ENST00000474805 MYOZ2Q9NPC6 264 aa16.21■□□□□ 0.19
TRIM13-207ENST00000474805 LAS1LQ9Y4W2 734 aaKnown RBP16.21■□□□□ 0.19
TRIM13-207ENST00000474805 USP17L8P0C7I0 530 aa16.2■□□□□ 0.18
TRIM13-207ENST00000474805 GMLQ99445 158 aa16.2■□□□□ 0.18
TRIM13-207ENST00000474805 GGA1Q9UJY5 639 aa16.2■□□□□ 0.18
TRIM13-207ENST00000474805 GPR25O00155 361 aa16.19■□□□□ 0.18
TRIM13-207ENST00000474805 CHL1O00533 1208 aa16.19■□□□□ 0.18
TRIM13-207ENST00000474805 TM4SF4P48230 202 aa16.19■□□□□ 0.18
TRIM13-207ENST00000474805 MKRN3Q13064 507 aaKnown RBP16.19■□□□□ 0.18
TRIM13-207ENST00000474805 TTLL12Q14166 644 aaPredicted RBP16.19■□□□□ 0.18
TRIM13-207ENST00000474805 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
TRIM13-207ENST00000474805 HDGFL1Q5TGJ6 251 aa16.19■□□□□ 0.18
TRIM13-207ENST00000474805 PITPNM2Q9BZ72 1349 aa16.19■□□□□ 0.18
TRIM13-207ENST00000474805 LMOD3Q0VAK6 560 aa16.18■□□□□ 0.18
TRIM13-207ENST00000474805 FBXO46Q6PJ61 603 aaPredicted RBP16.18■□□□□ 0.18
TRIM13-207ENST00000474805 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
TRIM13-207ENST00000474805 ZNF609O15014 1411 aa16.18■□□□□ 0.18
TRIM13-207ENST00000474805 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
TRIM13-207ENST00000474805 NBPF9Q3BBW0 867 aa16.17■□□□□ 0.18
TRIM13-207ENST00000474805 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
TRIM13-207ENST00000474805 R3HDMLQ9H3Y0 253 aa16.17■□□□□ 0.18
TRIM13-207ENST00000474805 USP17L3A6NCW0 530 aa16.16■□□□□ 0.18
TRIM13-207ENST00000474805 USP17L4A6NCW7 530 aa16.16■□□□□ 0.18
TRIM13-207ENST00000474805 USP17L1Q7RTZ2 530 aa16.16■□□□□ 0.18
TRIM13-207ENST00000474805 ZBTB38Q8NAP3 1195 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-207ENST00000474805 JARID2Q92833 1246 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-207ENST00000474805 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
TRIM13-207ENST00000474805 WTIPA6NIX2 430 aaPredicted RBP16.15■□□□□ 0.18
TRIM13-207ENST00000474805 FKTNO75072 461 aa16.15■□□□□ 0.18
TRIM13-207ENST00000474805 NOM1Q5C9Z4 860 aaKnown RBP16.15■□□□□ 0.18
TRIM13-207ENST00000474805 RIC3Q7Z5B4 369 aa16.15■□□□□ 0.18
TRIM13-207ENST00000474805 MXD3Q9BW11 206 aa16.15■□□□□ 0.18
TRIM13-207ENST00000474805 ZNF646O15015 1829 aaPredicted RBP16.15■□□□□ 0.18
TRIM13-207ENST00000474805 SPEF2Q9C093 1822 aa16.15■□□□□ 0.18
TRIM13-207ENST00000474805 PRKG1Q13976 671 aa16.14■□□□□ 0.17
TRIM13-207ENST00000474805 CCDC152Q4G0S7 254 aa16.14■□□□□ 0.17
TRIM13-207ENST00000474805 PODNQ7Z5L7 613 aa16.14■□□□□ 0.17
TRIM13-207ENST00000474805 CCDC146Q8IYE0 955 aa16.14■□□□□ 0.17
TRIM13-207ENST00000474805 GCC1Q96CN9 775 aa16.14■□□□□ 0.17
TRIM13-207ENST00000474805 XDHP47989 1333 aa16.14■□□□□ 0.17
TRIM13-207ENST00000474805 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
TRIM13-207ENST00000474805 NF2P35240 595 aa16.13■□□□□ 0.17
TRIM13-207ENST00000474805 PTPN12Q05209 780 aaKnown RBP16.13■□□□□ 0.17
TRIM13-207ENST00000474805 SREBF2Q12772 1141 aa16.13■□□□□ 0.17
TRIM13-207ENST00000474805 TRIM35Q9UPQ4 493 aa16.13■□□□□ 0.17
TRIM13-207ENST00000474805 WNT10BO00744 389 aa16.12■□□□□ 0.17
TRIM13-207ENST00000474805 PDE8AO60658 829 aa16.12■□□□□ 0.17
TRIM13-207ENST00000474805 HOXB7P09629 217 aa16.12■□□□□ 0.17
TRIM13-207ENST00000474805 HABP4Q5JVS0 413 aaKnown RBP16.12■□□□□ 0.17
TRIM13-207ENST00000474805 DUSP27Q5VZP5 1158 aa16.12■□□□□ 0.17
TRIM13-207ENST00000474805 ANKRD18AQ8IVF6 992 aa16.12■□□□□ 0.17
TRIM13-207ENST00000474805 FBXW7Q969H0 707 aa16.12■□□□□ 0.17
TRIM13-207ENST00000474805 MYD88Q99836 296 aa16.12■□□□□ 0.17
TRIM13-207ENST00000474805 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
TRIM13-207ENST00000474805 HSP90B1P14625 803 aaKnown RBP16.11■□□□□ 0.17
TRIM13-207ENST00000474805 DACT2Q5SW24 774 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms