RNA–Protein interactions for RNA: ENST00000474391.1

COL4A1-203, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 2

Gene COL4A1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-203ENST00000474391 CT47B1P0C2W7 299 aaPredicted RBP13.37□□□□□ -0.27
COL4A1-203ENST00000474391 ITGA6P23229 1130 aa13.37□□□□□ -0.27
COL4A1-203ENST00000474391 LMOD1P29536 600 aaPredicted RBP13.37□□□□□ -0.27
COL4A1-203ENST00000474391 EPS15P42566 896 aa13.37□□□□□ -0.27
COL4A1-203ENST00000474391 FOXO4P98177 505 aa13.37□□□□□ -0.27
COL4A1-203ENST00000474391 TNIP1Q15025 636 aa13.37□□□□□ -0.27
COL4A1-203ENST00000474391 SRCIN1Q9C0H9 1055 aa13.37□□□□□ -0.27
COL4A1-203ENST00000474391 ANKIB1Q9P2G1 1089 aa13.37□□□□□ -0.27
COL4A1-203ENST00000474391 GGA1Q9UJY5 639 aa13.37□□□□□ -0.27
COL4A1-203ENST00000474391 MINPP1Q9UNW1 487 aa13.37□□□□□ -0.27
COL4A1-203ENST00000474391 PASKQ96RG2 1323 aa13.37□□□□□ -0.27
COL4A1-203ENST00000474391 RIMBP2O15034 1052 aa13.36□□□□□ -0.27
COL4A1-203ENST00000474391 RAD17O75943 681 aa13.36□□□□□ -0.27
COL4A1-203ENST00000474391 UFL1O94874 794 aa13.36□□□□□ -0.27
COL4A1-203ENST00000474391 ITGBL1O95965 494 aaPredicted RBP13.36□□□□□ -0.27
COL4A1-203ENST00000474391 GMPSP49915 693 aaPredicted RBP13.36□□□□□ -0.27
COL4A1-203ENST00000474391 HTRA3P83110 453 aa13.36□□□□□ -0.27
COL4A1-203ENST00000474391 FAM161AQ3B820 660 aa13.36□□□□□ -0.27
COL4A1-203ENST00000474391 EAPPQ56P03 285 aaPredicted RBP13.36□□□□□ -0.27
COL4A1-203ENST00000474391 USP50Q70EL3 339 aaPredicted RBP13.36□□□□□ -0.27
COL4A1-203ENST00000474391 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
COL4A1-203ENST00000474391 ZC3H12CQ9C0D7 883 aaKnown RBP13.36□□□□□ -0.27
COL4A1-203ENST00000474391 DBNDD1Q9H9R9 158 aa13.36□□□□□ -0.27
COL4A1-203ENST00000474391 UTYO14607 1347 aa13.36□□□□□ -0.27
COL4A1-203ENST00000474391 ECE2O60344 883 aa13.35□□□□□ -0.27
COL4A1-203ENST00000474391 ATP2B4P23634 1241 aa13.35□□□□□ -0.27
COL4A1-203ENST00000474391 IGHMBP2P38935 993 aaKnown RBP13.35□□□□□ -0.27
COL4A1-203ENST00000474391 SLC4A10Q6U841 1118 aa13.35□□□□□ -0.27
COL4A1-203ENST00000474391 ADARB2Q9NS39 739 aaKnown RBP13.35□□□□□ -0.27
COL4A1-203ENST00000474391 WTIPA6NIX2 430 aaPredicted RBP13.34□□□□□ -0.27
COL4A1-203ENST00000474391 BRPF1P55201 1214 aaPredicted RBP13.34□□□□□ -0.27
COL4A1-203ENST00000474391 DOK7Q18PE1 504 aa13.34□□□□□ -0.27
COL4A1-203ENST00000474391 EPHA10Q5JZY3 1008 aa13.34□□□□□ -0.27
COL4A1-203ENST00000474391 DPF2Q92785 391 aa13.34□□□□□ -0.27
COL4A1-203ENST00000474391 C9orf78Q9NZ63 289 aaPredicted RBP13.34□□□□□ -0.27
COL4A1-203ENST00000474391 MED23Q9ULK4 1368 aa13.33□□□□□ -0.27
COL4A1-203ENST00000474391 ZNF609O15014 1411 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 ANKRD18BA2A2Z9 1011 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 PSMD14O00487 310 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 CCT4P50991 539 aaKnown RBP13.33□□□□□ -0.28
COL4A1-203ENST00000474391 MAP1SQ66K74 1059 aaPredicted RBP13.33□□□□□ -0.28
COL4A1-203ENST00000474391 LMBR1LQ6UX01 489 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 CNTROBQ8N137 903 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 KLRG1Q96E93 195 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 KAZALD1Q96I82 304 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 MPHOSPH8Q99549 860 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 BCL2L13Q9BXK5 485 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 ANKRD2Q9GZV1 360 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 KCNQ5Q9NR82 932 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 PGAP2Q9UHJ9 254 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 LEMD3Q9Y2U8 911 aa13.33□□□□□ -0.28
COL4A1-203ENST00000474391 VIL1P09327 827 aaKnown RBP13.32□□□□□ -0.28
COL4A1-203ENST00000474391 NBPF7P0C2Y1 421 aaPredicted RBP13.32□□□□□ -0.28
COL4A1-203ENST00000474391 RPS12P25398 132 aaKnown RBP13.32□□□□□ -0.28
COL4A1-203ENST00000474391 IFIT5Q13325 482 aaKnown RBP13.32□□□□□ -0.28
COL4A1-203ENST00000474391 PODNQ7Z5L7 613 aa13.32□□□□□ -0.28
COL4A1-203ENST00000474391 JMYQ8N9B5 988 aa13.32□□□□□ -0.28
COL4A1-203ENST00000474391 SMC4Q9NTJ3 1288 aa13.32□□□□□ -0.28
COL4A1-203ENST00000474391 CNOT7Q9UIV1 285 aaKnown RBP13.32□□□□□ -0.28
COL4A1-203ENST00000474391 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
COL4A1-203ENST00000474391 SPEF2Q9C093 1822 aa13.32□□□□□ -0.28
COL4A1-203ENST00000474391 RABL6Q3YEC7 729 aaPredicted RBP13.31□□□□□ -0.28
COL4A1-203ENST00000474391 ZC3H15Q8WU90 426 aaKnown RBP13.31□□□□□ -0.28
COL4A1-203ENST00000474391 SUCLG2Q96I99 432 aa13.31□□□□□ -0.28
COL4A1-203ENST00000474391 SCN9AQ15858 1988 aa13.31□□□□□ -0.28
COL4A1-203ENST00000474391 SHTN1A0MZ66 631 aa13.3□□□□□ -0.28
COL4A1-203ENST00000474391 H7C1D1 291 aa13.3□□□□□ -0.28
COL4A1-203ENST00000474391 RARSP54136 660 aaKnown RBP13.3□□□□□ -0.28
COL4A1-203ENST00000474391 HIRAP54198 1017 aaPredicted RBP13.3□□□□□ -0.28
COL4A1-203ENST00000474391 CHRNDQ07001 517 aa13.3□□□□□ -0.28
COL4A1-203ENST00000474391 CCDC57Q2TAC2 916 aa13.3□□□□□ -0.28
COL4A1-203ENST00000474391 MICALL2Q8IY33 904 aa13.3□□□□□ -0.28
COL4A1-203ENST00000474391 USP44Q9H0E7 712 aa13.3□□□□□ -0.28
COL4A1-203ENST00000474391 ZNF804BA4D1E1 1349 aa13.3□□□□□ -0.28
COL4A1-203ENST00000474391 G3V3G9 751 aa13.29□□□□□ -0.28
COL4A1-203ENST00000474391 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
COL4A1-203ENST00000474391 TXNRD3Q86VQ6 643 aa13.29□□□□□ -0.28
COL4A1-203ENST00000474391 TRPM4Q8TD43 1214 aa13.29□□□□□ -0.28
COL4A1-203ENST00000474391 COA1Q9GZY4 146 aa13.29□□□□□ -0.28
COL4A1-203ENST00000474391 CHMP3Q9Y3E7 222 aa13.29□□□□□ -0.28
COL4A1-203ENST00000474391 IRS2Q9Y4H2 1338 aa13.29□□□□□ -0.28
COL4A1-203ENST00000474391 PSME4Q14997 1843 aa13.29□□□□□ -0.28
COL4A1-203ENST00000474391 TMEM88BA6NKF7 163 aa13.28□□□□□ -0.28
COL4A1-203ENST00000474391 RSBN1LQ6PCB5 846 aaPredicted RBP13.28□□□□□ -0.28
COL4A1-203ENST00000474391 LDHAL6AQ6ZMR3 332 aa13.28□□□□□ -0.28
COL4A1-203ENST00000474391 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
COL4A1-203ENST00000474391 ANKRD44Q8N8A2 993 aa13.28□□□□□ -0.28
COL4A1-203ENST00000474391 AGBL3Q8NEM8 1001 aa13.28□□□□□ -0.28
COL4A1-203ENST00000474391 ZNF594Q96JF6 807 aaPredicted RBP13.28□□□□□ -0.28
COL4A1-203ENST00000474391 GMLQ99445 158 aa13.28□□□□□ -0.28
COL4A1-203ENST00000474391 BICC1Q9H694 974 aaKnown RBP13.28□□□□□ -0.28
COL4A1-203ENST00000474391 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
COL4A1-203ENST00000474391 USP17L3A6NCW0 530 aa13.27□□□□□ -0.29
COL4A1-203ENST00000474391 USP17L4A6NCW7 530 aa13.27□□□□□ -0.29
COL4A1-203ENST00000474391 EGFRP00533 1210 aa13.27□□□□□ -0.29
COL4A1-203ENST00000474391 KLRK1P26718 216 aa13.27□□□□□ -0.29
COL4A1-203ENST00000474391 ZNF280AP59817 542 aaPredicted RBP13.27□□□□□ -0.29
COL4A1-203ENST00000474391 USP17L1Q7RTZ2 530 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms