RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 KIAA2012Q0VF49 1180 aa16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 NEXNQ0ZGT2 675 aa16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 FLIIQ13045 1269 aa16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 TNIP1Q15025 636 aa16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 CDC37L1Q7L3B6 337 aa16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 PI4KAP1Q8N8J0 262 aa16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 TRPM4Q8TD43 1214 aa16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 FAM89AQ96GI7 184 aa16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 CWC25Q9NXE8 425 aaPredicted RBP16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 CNOT7Q9UIV1 285 aaKnown RBP16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 MAP3K2Q9Y2U5 619 aa16.57■□□□□ 0.24
SHROOM3-204ENST00000473602 SHTN1A0MZ66 631 aa16.56■□□□□ 0.24
SHROOM3-204ENST00000473602 E9PSI1 815 aa16.56■□□□□ 0.24
SHROOM3-204ENST00000473602 DGKZQ13574 1117 aa16.56■□□□□ 0.24
SHROOM3-204ENST00000473602 DIEXFQ68CQ4 756 aaKnown RBP16.56■□□□□ 0.24
SHROOM3-204ENST00000473602 USP48Q86UV5 1035 aa16.56■□□□□ 0.24
SHROOM3-204ENST00000473602 ZIC5Q96T25 663 aa16.56■□□□□ 0.24
SHROOM3-204ENST00000473602 MYH3P11055 1940 aa16.56■□□□□ 0.24
SHROOM3-204ENST00000473602 LRRC37AA6NMS7 1700 aa16.56■□□□□ 0.24
SHROOM3-204ENST00000473602 TAF1P21675 1872 aa16.55■□□□□ 0.24
SHROOM3-204ENST00000473602 CDHR2Q9BYE9 1310 aa16.55■□□□□ 0.24
SHROOM3-204ENST00000473602 YDJCA8MPS7 323 aa16.55■□□□□ 0.24
SHROOM3-204ENST00000473602 H7C1D1 291 aa16.55■□□□□ 0.24
SHROOM3-204ENST00000473602 IRS4O14654 1257 aaPredicted RBP16.55■□□□□ 0.24
SHROOM3-204ENST00000473602 PCCAP05165 728 aaPredicted RBP16.55■□□□□ 0.24
SHROOM3-204ENST00000473602 SF3B3Q15393 1217 aaKnown RBP16.55■□□□□ 0.24
SHROOM3-204ENST00000473602 DLK2Q6UY11 383 aa16.55■□□□□ 0.24
SHROOM3-204ENST00000473602 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
SHROOM3-204ENST00000473602 G2E3Q7L622 706 aa16.55■□□□□ 0.24
SHROOM3-204ENST00000473602 TMC4Q7Z404 712 aa16.55■□□□□ 0.24
SHROOM3-204ENST00000473602 HUNKP57058 714 aa16.54■□□□□ 0.24
SHROOM3-204ENST00000473602 NOGQ13253 232 aa16.54■□□□□ 0.24
SHROOM3-204ENST00000473602 FKBP5Q13451 457 aaPredicted RBP16.54■□□□□ 0.24
SHROOM3-204ENST00000473602 ZBTB12Q9Y330 459 aaPredicted RBP16.54■□□□□ 0.24
SHROOM3-204ENST00000473602 TRPM7Q96QT4 1865 aa16.54■□□□□ 0.24
SHROOM3-204ENST00000473602 GRAPQ13588 217 aa16.53■□□□□ 0.24
SHROOM3-204ENST00000473602 MICALL2Q8IY33 904 aa16.53■□□□□ 0.24
SHROOM3-204ENST00000473602 GRAPLQ8TC17 118 aaPredicted RBP16.53■□□□□ 0.24
SHROOM3-204ENST00000473602 IGKV5-2P06315 115 aa16.52■□□□□ 0.24
SHROOM3-204ENST00000473602 RTL5Q5HYW3 569 aaPredicted RBP16.52■□□□□ 0.24
SHROOM3-204ENST00000473602 SAMD7Q7Z3H4 446 aa16.52■□□□□ 0.24
SHROOM3-204ENST00000473602 DNAAF4Q8WXU2 420 aa16.52■□□□□ 0.24
SHROOM3-204ENST00000473602 NEURL1BA8MQ27 555 aa16.51■□□□□ 0.23
SHROOM3-204ENST00000473602 PDE8AO60658 829 aa16.51■□□□□ 0.23
SHROOM3-204ENST00000473602 SLFN5Q08AF3 891 aa16.51■□□□□ 0.23
SHROOM3-204ENST00000473602 ZNF428Q96B54 188 aa16.51■□□□□ 0.23
SHROOM3-204ENST00000473602 CASP8AP2Q9UKL3 1982 aa16.51■□□□□ 0.23
SHROOM3-204ENST00000473602 RGMBQ6NW40 437 aa16.5■□□□□ 0.23
SHROOM3-204ENST00000473602 LINS1Q8NG48 757 aa16.5■□□□□ 0.23
SHROOM3-204ENST00000473602 DPF2Q92785 391 aa16.5■□□□□ 0.23
SHROOM3-204ENST00000473602 PCDH10Q9P2E7 1040 aa16.5■□□□□ 0.23
SHROOM3-204ENST00000473602 PSMD14O00487 310 aa16.49■□□□□ 0.23
SHROOM3-204ENST00000473602 EGFRP00533 1210 aa16.49■□□□□ 0.23
SHROOM3-204ENST00000473602 CWF19L2Q2TBE0 894 aaKnown RBP16.49■□□□□ 0.23
SHROOM3-204ENST00000473602 CCDC152Q4G0S7 254 aa16.49■□□□□ 0.23
SHROOM3-204ENST00000473602 TBC1D10BQ4KMP7 808 aaPredicted RBP16.49■□□□□ 0.23
SHROOM3-204ENST00000473602 KRT26Q7Z3Y9 468 aa16.49■□□□□ 0.23
SHROOM3-204ENST00000473602 MIER1Q8N108 512 aa16.49■□□□□ 0.23
SHROOM3-204ENST00000473602 FAM155AB1AL88 458 aaPredicted RBP16.48■□□□□ 0.23
SHROOM3-204ENST00000473602 GCKRQ14397 625 aa16.48■□□□□ 0.23
SHROOM3-204ENST00000473602 WASHC4Q2M389 1173 aa16.48■□□□□ 0.23
SHROOM3-204ENST00000473602 RBM26Q5T8P6 1007 aaKnown RBP16.48■□□□□ 0.23
SHROOM3-204ENST00000473602 C2orf69Q8N8R5 385 aa16.48■□□□□ 0.23
SHROOM3-204ENST00000473602 DBNDD1Q9H9R9 158 aa16.48■□□□□ 0.23
SHROOM3-204ENST00000473602 GBA2Q9HCG7 927 aaPredicted RBP16.48■□□□□ 0.23
SHROOM3-204ENST00000473602 NSFL1CQ9UNZ2 370 aaKnown RBP16.48■□□□□ 0.23
SHROOM3-204ENST00000473602 RIMBP2O15034 1052 aa16.47■□□□□ 0.23
SHROOM3-204ENST00000473602 KIF23Q02241 960 aaPredicted RBP16.47■□□□□ 0.23
SHROOM3-204ENST00000473602 TRMT2AQ8IZ69 625 aaKnown RBP16.47■□□□□ 0.23
SHROOM3-204ENST00000473602 CELF1Q92879 486 aaKnown RBP16.47■□□□□ 0.23
SHROOM3-204ENST00000473602 CCDC102AQ96A19 550 aa16.47■□□□□ 0.23
SHROOM3-204ENST00000473602 KCNQ5Q9NR82 932 aa16.47■□□□□ 0.23
SHROOM3-204ENST00000473602 TNRC18O15417 2968 aaPredicted RBP16.47■□□□□ 0.23
SHROOM3-204ENST00000473602 DUOX1Q9NRD9 1551 aa16.47■□□□□ 0.23
SHROOM3-204ENST00000473602 ADM5C9JUS6 153 aa16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 C6orf229H3BNL8 230 aa16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 H7C1W4 665 aa16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 TRPA1O75762 1119 aa16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 CT47B1P0C2W7 299 aaPredicted RBP16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 ZNF157P51786 506 aaPredicted RBP16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 CTSWP56202 376 aa16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 RPS8P62241 208 aaKnown RBP16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 DCPSQ96C86 337 aaKnown RBP16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 SAGE1Q9NXZ1 904 aa16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 POLLQ9UGP5 575 aa16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 RTL9Q8NET4 1388 aa16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 COL4A1P02462 1669 aa16.46■□□□□ 0.23
SHROOM3-204ENST00000473602 SOX10P56693 466 aa16.45■□□□□ 0.22
SHROOM3-204ENST00000473602 DOK7Q18PE1 504 aa16.45■□□□□ 0.22
SHROOM3-204ENST00000473602 UBE3BQ7Z3V4 1068 aa16.45■□□□□ 0.22
SHROOM3-204ENST00000473602 CDCA7LQ96GN5 454 aa16.45■□□□□ 0.22
SHROOM3-204ENST00000473602 PLA2G12BQ9BX93 195 aa16.45■□□□□ 0.22
SHROOM3-204ENST00000473602 RNF186Q9NXI6 227 aa16.45■□□□□ 0.22
SHROOM3-204ENST00000473602 F6X3S4 739 aa16.44■□□□□ 0.22
SHROOM3-204ENST00000473602 RPS12P25398 132 aaKnown RBP16.44■□□□□ 0.22
SHROOM3-204ENST00000473602 GPSM2P81274 684 aa16.44■□□□□ 0.22
SHROOM3-204ENST00000473602 ALDH1L2Q3SY69 923 aa16.44■□□□□ 0.22
SHROOM3-204ENST00000473602 BEND3Q5T5X7 828 aa16.44■□□□□ 0.22
SHROOM3-204ENST00000473602 JARID2Q92833 1246 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms