RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 NBPF5PQ86XG9 351 aaPredicted RBP8.3□□□□□ -1.08
HDAC1-205ENST00000472928 DZIP3Q86Y13 1208 aaKnown RBP8.3□□□□□ -1.08
HDAC1-205ENST00000472928 IL27Q8NEV9 243 aa8.3□□□□□ -1.08
HDAC1-205ENST00000472928 IL17REQ8NFR9 667 aa8.3□□□□□ -1.08
HDAC1-205ENST00000472928 RUNDC1Q96C34 613 aa8.3□□□□□ -1.08
HDAC1-205ENST00000472928 TEX13AQ9BXU3 409 aaPredicted RBP8.3□□□□□ -1.08
HDAC1-205ENST00000472928 PCDHGA4Q9Y5G9 962 aa8.3□□□□□ -1.08
HDAC1-205ENST00000472928 TRPM7Q96QT4 1865 aa8.3□□□□□ -1.08
HDAC1-205ENST00000472928 APAF1O14727 1248 aa8.29□□□□□ -1.08
HDAC1-205ENST00000472928 KCNQ3O43525 872 aa8.29□□□□□ -1.08
HDAC1-205ENST00000472928 PIP4K2AP48426 406 aaPredicted RBP8.29□□□□□ -1.08
HDAC1-205ENST00000472928 SAPCD2Q86UD0 394 aa8.29□□□□□ -1.08
HDAC1-205ENST00000472928 SLC51AQ86UW1 340 aa8.29□□□□□ -1.08
HDAC1-205ENST00000472928 PSMD1Q99460 953 aa8.29□□□□□ -1.08
HDAC1-205ENST00000472928 EPAS1Q99814 870 aa8.29□□□□□ -1.08
HDAC1-205ENST00000472928 CDHR5Q9HBB8 845 aa8.29□□□□□ -1.08
HDAC1-205ENST00000472928 GJA3Q9Y6H8 435 aa8.29□□□□□ -1.08
HDAC1-205ENST00000472928 SIPA1L3O60292 1781 aaPredicted RBP8.29□□□□□ -1.08
HDAC1-205ENST00000472928 CA12O43570 354 aa8.28□□□□□ -1.08
HDAC1-205ENST00000472928 PRKAR2BP31323 418 aa8.28□□□□□ -1.08
HDAC1-205ENST00000472928 DGKZQ13574 1117 aa8.28□□□□□ -1.08
HDAC1-205ENST00000472928 CLEC4GQ6UXB4 293 aa8.28□□□□□ -1.08
HDAC1-205ENST00000472928 USP50Q70EL3 339 aaPredicted RBP8.28□□□□□ -1.08
HDAC1-205ENST00000472928 PARP9Q8IXQ6 854 aa8.28□□□□□ -1.08
HDAC1-205ENST00000472928 FMNL2Q96PY5 1086 aa8.28□□□□□ -1.08
HDAC1-205ENST00000472928 ZIC5Q96T25 663 aa8.28□□□□□ -1.08
HDAC1-205ENST00000472928 RSPH6AQ9H0K4 717 aa8.28□□□□□ -1.08
HDAC1-205ENST00000472928 ABCC12Q96J65 1359 aa8.27□□□□□ -1.09
HDAC1-205ENST00000472928 PRAMEF22A3QJZ6 481 aa8.27□□□□□ -1.09
HDAC1-205ENST00000472928 NEFMP07197 916 aa8.27□□□□□ -1.09
HDAC1-205ENST00000472928 LMOD1P29536 600 aaPredicted RBP8.27□□□□□ -1.09
HDAC1-205ENST00000472928 EIF6P56537 245 aaKnown RBP8.27□□□□□ -1.09
HDAC1-205ENST00000472928 CRY2Q49AN0 593 aa8.27□□□□□ -1.09
HDAC1-205ENST00000472928 CIAPIN1Q6FI81 312 aa8.27□□□□□ -1.09
HDAC1-205ENST00000472928 JDP2Q8WYK2 163 aa8.27□□□□□ -1.09
HDAC1-205ENST00000472928 PLEKHF1Q96S99 279 aa8.27□□□□□ -1.09
HDAC1-205ENST00000472928 PNNQ9H307 717 aaKnown RBP8.27□□□□□ -1.09
HDAC1-205ENST00000472928 NPDC1Q9NQX5 325 aaPredicted RBP8.27□□□□□ -1.09
HDAC1-205ENST00000472928 RRP7AQ9Y3A4 280 aaKnown RBP8.27□□□□□ -1.09
HDAC1-205ENST00000472928 PCDHGA10Q9Y5H3 936 aa8.27□□□□□ -1.09
HDAC1-205ENST00000472928 USP16Q9Y5T5 823 aa8.27□□□□□ -1.09
HDAC1-205ENST00000472928 ZNF521Q96K83 1311 aa8.27□□□□□ -1.09
HDAC1-205ENST00000472928 CEMIPQ8WUJ3 1361 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 GNAT3A8MTJ3 354 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 NBPF26B4DH59 902 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 MAP3K7O43318 606 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 CELF2O95319 508 aaKnown RBP8.26□□□□□ -1.09
HDAC1-205ENST00000472928 ALDH1B1P30837 517 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 TEFQ10587 303 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 NBPF10Q6P3W6 841 aaKnown RBP8.26□□□□□ -1.09
HDAC1-205ENST00000472928 TPTE2Q6XPS3 522 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 LARGE2Q8N3Y3 721 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 NGEFQ8N5V2 710 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 NBPF15Q8N660 670 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 SLAIN1Q8ND83 568 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 HHIPL1Q96JK4 782 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 FAM117AQ9C073 453 aa8.26□□□□□ -1.09
HDAC1-205ENST00000472928 NIP7Q9Y221 180 aaKnown RBP eCLIP8.26□□□□□ -1.09
HDAC1-205ENST00000472928 FAM177BA6PVY3 158 aa8.25□□□□□ -1.09
HDAC1-205ENST00000472928 SOX10P56693 466 aa8.25□□□□□ -1.09
HDAC1-205ENST00000472928 HLFQ16534 295 aa8.25□□□□□ -1.09
HDAC1-205ENST00000472928 CC2D2BQ6DHV5 1058 aa8.25□□□□□ -1.09
HDAC1-205ENST00000472928 TYW1BQ6NUM6 668 aa8.25□□□□□ -1.09
HDAC1-205ENST00000472928 NPM2Q86SE8 214 aaKnown RBP8.25□□□□□ -1.09
HDAC1-205ENST00000472928 GLIS2Q9BZE0 524 aaPredicted RBP8.25□□□□□ -1.09
HDAC1-205ENST00000472928 ADARB2Q9NS39 739 aaKnown RBP8.25□□□□□ -1.09
HDAC1-205ENST00000472928 GPRC5DQ9NZD1 345 aa8.25□□□□□ -1.09
HDAC1-205ENST00000472928 PGAP2Q9UHJ9 254 aa8.25□□□□□ -1.09
HDAC1-205ENST00000472928 ZNF652Q9Y2D9 606 aa8.25□□□□□ -1.09
HDAC1-205ENST00000472928 CEP290O15078 2479 aa8.24□□□□□ -1.09
HDAC1-205ENST00000472928 RIC1Q4ADV7 1423 aa8.24□□□□□ -1.09
HDAC1-205ENST00000472928 HOXA10P31260 410 aaPredicted RBP8.24□□□□□ -1.09
HDAC1-205ENST00000472928 TMPOP42166 694 aaKnown RBP8.24□□□□□ -1.09
HDAC1-205ENST00000472928 HIRAP54198 1017 aaPredicted RBP8.24□□□□□ -1.09
HDAC1-205ENST00000472928 PRPF38BQ5VTL8 546 aaKnown RBP8.24□□□□□ -1.09
HDAC1-205ENST00000472928 GAS2L2Q8NHY3 880 aa8.24□□□□□ -1.09
HDAC1-205ENST00000472928 KDM3BQ7LBC6 1761 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 BTBD11A6QL63 1104 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 NOGQ13253 232 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 NFE2L2Q16236 605 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 TSR1Q2NL82 804 aaKnown RBP8.23□□□□□ -1.09
HDAC1-205ENST00000472928 NUTM1Q86Y26 1132 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 WWC1Q8IX03 1113 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 NIM1KQ8IY84 436 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 TRPM4Q8TD43 1214 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 FBXW7Q969H0 707 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 CDCA7LQ96GN5 454 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 DDRGK1Q96HY6 314 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 CUL9Q8IWT3 2517 aa8.23□□□□□ -1.09
HDAC1-205ENST00000472928 FAM155AB1AL88 458 aaPredicted RBP8.22□□□□□ -1.09
HDAC1-205ENST00000472928 PPIP5K2O43314 1243 aa8.22□□□□□ -1.09
HDAC1-205ENST00000472928 SNRPA1P09661 255 aaKnown RBP8.22□□□□□ -1.09
HDAC1-205ENST00000472928 GMPSP49915 693 aaPredicted RBP8.22□□□□□ -1.09
HDAC1-205ENST00000472928 FOSBP53539 338 aa8.22□□□□□ -1.09
HDAC1-205ENST00000472928 CXCL9Q07325 125 aa8.22□□□□□ -1.09
HDAC1-205ENST00000472928 TTLL12Q14166 644 aaPredicted RBP8.22□□□□□ -1.09
HDAC1-205ENST00000472928 CCDC27Q2M243 656 aa8.22□□□□□ -1.09
HDAC1-205ENST00000472928 DLK2Q6UY11 383 aa8.22□□□□□ -1.09
HDAC1-205ENST00000472928 PHACTR3Q96KR7 559 aa8.22□□□□□ -1.09
HDAC1-205ENST00000472928 ZNF408Q9H9D4 720 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms