RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 FER1L6Q2WGJ9 1857 aa18.24■□□□□ 0.51
SMARCD3-207ENST00000472103 GPSM2P81274 684 aa18.24■□□□□ 0.51
SMARCD3-207ENST00000472103 HELBQ8NG08 1087 aaPredicted RBP18.24■□□□□ 0.51
SMARCD3-207ENST00000472103 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.24■□□□□ 0.51
SMARCD3-207ENST00000472103 DUOX1Q9NRD9 1551 aa18.24■□□□□ 0.51
SMARCD3-207ENST00000472103 SNAP23O00161 211 aa18.23■□□□□ 0.51
SMARCD3-207ENST00000472103 EYA2O00167 538 aa18.23■□□□□ 0.51
SMARCD3-207ENST00000472103 CHRNDQ07001 517 aa18.23■□□□□ 0.51
SMARCD3-207ENST00000472103 CNNM1Q9NRU3 951 aa18.23■□□□□ 0.51
SMARCD3-207ENST00000472103 SRCAPQ6ZRS2 3230 aa18.23■□□□□ 0.51
SMARCD3-207ENST00000472103 TAF5LO75529 589 aa18.22■□□□□ 0.51
SMARCD3-207ENST00000472103 GPR162Q16538 588 aa18.22■□□□□ 0.51
SMARCD3-207ENST00000472103 CCDC93Q567U6 631 aa18.22■□□□□ 0.51
SMARCD3-207ENST00000472103 TMC4Q7Z404 712 aa18.22■□□□□ 0.51
SMARCD3-207ENST00000472103 NFKBIEO00221 500 aa18.21■□□□□ 0.51
SMARCD3-207ENST00000472103 SURF6O75683 361 aaKnown RBP18.21■□□□□ 0.51
SMARCD3-207ENST00000472103 PRELPP51888 382 aa18.21■□□□□ 0.51
SMARCD3-207ENST00000472103 RASSF7Q02833 373 aa18.21■□□□□ 0.51
SMARCD3-207ENST00000472103 GPR101Q96P66 508 aaPredicted RBP18.21■□□□□ 0.51
SMARCD3-207ENST00000472103 EXOC6BQ9Y2D4 811 aa18.21■□□□□ 0.51
SMARCD3-207ENST00000472103 NOP58Q9Y2X3 529 aaKnown RBP18.21■□□□□ 0.51
SMARCD3-207ENST00000472103 CIAO1O76071 339 aa18.2■□□□□ 0.5
SMARCD3-207ENST00000472103 SASH1O94885 1247 aa18.2■□□□□ 0.5
SMARCD3-207ENST00000472103 AAMPQ13685 434 aa18.2■□□□□ 0.5
SMARCD3-207ENST00000472103 MPNDQ8N594 471 aa18.2■□□□□ 0.5
SMARCD3-207ENST00000472103 VGLL2Q8N8G2 317 aa18.2■□□□□ 0.5
SMARCD3-207ENST00000472103 POLLQ9UGP5 575 aa18.2■□□□□ 0.5
SMARCD3-207ENST00000472103 NSFL1CQ9UNZ2 370 aaKnown RBP18.2■□□□□ 0.5
SMARCD3-207ENST00000472103 IGHDP01880 384 aa18.19■□□□□ 0.5
SMARCD3-207ENST00000472103 CC2D2BQ6DHV5 1058 aa18.19■□□□□ 0.5
SMARCD3-207ENST00000472103 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
SMARCD3-207ENST00000472103 HMMRO75330 724 aa18.18■□□□□ 0.5
SMARCD3-207ENST00000472103 NEFLP07196 543 aa18.18■□□□□ 0.5
SMARCD3-207ENST00000472103 METTL24Q5JXM2 366 aa18.18■□□□□ 0.5
SMARCD3-207ENST00000472103 ARHGAP27Q6ZUM4 889 aa18.18■□□□□ 0.5
SMARCD3-207ENST00000472103 TBC1D16Q8TBP0 767 aa18.18■□□□□ 0.5
SMARCD3-207ENST00000472103 FBXO3Q9UK99 471 aa18.18■□□□□ 0.5
SMARCD3-207ENST00000472103 CCDC88AQ3V6T2 1871 aa18.18■□□□□ 0.5
SMARCD3-207ENST00000472103 KLRK1P26718 216 aa18.17■□□□□ 0.5
SMARCD3-207ENST00000472103 IL15P40933 162 aaPredicted RBP18.17■□□□□ 0.5
SMARCD3-207ENST00000472103 FKBP4Q02790 459 aaKnown RBP eCLIP18.17■□□□□ 0.5
SMARCD3-207ENST00000472103 TFCP2Q12800 502 aa18.17■□□□□ 0.5
SMARCD3-207ENST00000472103 G3BP1Q13283 466 aaKnown RBP eCLIP18.17■□□□□ 0.5
SMARCD3-207ENST00000472103 DPP8Q6V1X1 898 aaPredicted RBP18.17■□□□□ 0.5
SMARCD3-207ENST00000472103 RTFDC1Q9BY42 306 aaPredicted RBP18.17■□□□□ 0.5
SMARCD3-207ENST00000472103 DCTPP1Q9H773 170 aa18.17■□□□□ 0.5
SMARCD3-207ENST00000472103 ANKIB1Q9P2G1 1089 aa18.17■□□□□ 0.5
SMARCD3-207ENST00000472103 XDHP47989 1333 aa18.17■□□□□ 0.5
SMARCD3-207ENST00000472103 MROH5Q6ZUA9 1318 aa18.17■□□□□ 0.5
SMARCD3-207ENST00000472103 SBF1O95248 1867 aa18.16■□□□□ 0.5
SMARCD3-207ENST00000472103 COL4A5P29400 1685 aa18.16■□□□□ 0.5
SMARCD3-207ENST00000472103 UFL1O94874 794 aa18.16■□□□□ 0.5
SMARCD3-207ENST00000472103 HDAC1Q13547 482 aaPredicted RBP18.16■□□□□ 0.5
SMARCD3-207ENST00000472103 SOGA3Q5TF21 947 aa18.16■□□□□ 0.5
SMARCD3-207ENST00000472103 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
SMARCD3-207ENST00000472103 ANKRD2Q9GZV1 360 aa18.16■□□□□ 0.5
SMARCD3-207ENST00000472103 ZNF277Q9NRM2 450 aaPredicted RBP18.16■□□□□ 0.5
SMARCD3-207ENST00000472103 GGA1Q9UJY5 639 aa18.16■□□□□ 0.5
SMARCD3-207ENST00000472103 IRS2Q9Y4H2 1338 aa18.16■□□□□ 0.5
SMARCD3-207ENST00000472103 APBB1O00213 710 aa18.15■□□□□ 0.5
SMARCD3-207ENST00000472103 PDE8BO95263 885 aa18.15■□□□□ 0.5
SMARCD3-207ENST00000472103 ATP2B4P23634 1241 aa18.15■□□□□ 0.5
SMARCD3-207ENST00000472103 TXNRD3Q86VQ6 643 aa18.15■□□□□ 0.5
SMARCD3-207ENST00000472103 PSMD1Q99460 953 aa18.15■□□□□ 0.5
SMARCD3-207ENST00000472103 TAOK3Q9H2K8 898 aa18.15■□□□□ 0.5
SMARCD3-207ENST00000472103 C6orf229H3BNL8 230 aa18.14■□□□□ 0.49
SMARCD3-207ENST00000472103 FGFR2P21802 821 aa18.14■□□□□ 0.49
SMARCD3-207ENST00000472103 OS9Q13438 667 aaPredicted RBP18.14■□□□□ 0.49
SMARCD3-207ENST00000472103 TMX4Q9H1E5 349 aaPredicted RBP18.14■□□□□ 0.49
SMARCD3-207ENST00000472103 CEP126Q9P2H0 1117 aa18.14■□□□□ 0.49
SMARCD3-207ENST00000472103 ZNF804BA4D1E1 1349 aa18.14■□□□□ 0.49
SMARCD3-207ENST00000472103 LTBP3Q9NS15 1303 aa18.14■□□□□ 0.49
SMARCD3-207ENST00000472103 RIMBP2O15034 1052 aa18.13■□□□□ 0.49
SMARCD3-207ENST00000472103 RHPN1Q8TCX5 695 aa18.13■□□□□ 0.49
SMARCD3-207ENST00000472103 LEMD3Q9Y2U8 911 aa18.13■□□□□ 0.49
SMARCD3-207ENST00000472103 SMARCA5O60264 1052 aaPredicted RBP18.12■□□□□ 0.49
SMARCD3-207ENST00000472103 GRIN3BO60391 1043 aa18.12■□□□□ 0.49
SMARCD3-207ENST00000472103 UBE4AQ14139 1066 aa18.12■□□□□ 0.49
SMARCD3-207ENST00000472103 AOC3Q16853 763 aa18.12■□□□□ 0.49
SMARCD3-207ENST00000472103 GRIPAP1Q4V328 841 aa18.12■□□□□ 0.49
SMARCD3-207ENST00000472103 IL1RAPL2Q9NP60 686 aa18.12■□□□□ 0.49
SMARCD3-207ENST00000472103 ZNF609O15014 1411 aa18.12■□□□□ 0.49
SMARCD3-207ENST00000472103 ADORA1P30542 326 aa18.11■□□□□ 0.49
SMARCD3-207ENST00000472103 IARSP41252 1262 aaKnown RBP18.11■□□□□ 0.49
SMARCD3-207ENST00000472103 KCNJ4P48050 445 aa18.11■□□□□ 0.49
SMARCD3-207ENST00000472103 TIMM10P62072 90 aa18.11■□□□□ 0.49
SMARCD3-207ENST00000472103 RWDD1Q9H446 243 aaPredicted RBP18.11■□□□□ 0.49
SMARCD3-207ENST00000472103 ARAP2Q8WZ64 1704 aa18.11■□□□□ 0.49
SMARCD3-207ENST00000472103 DICER1Q9UPY3 1922 aaKnown RBP18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 MED23Q9ULK4 1368 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 A0A1B0GUL7 405 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 PPIP5K2O43314 1243 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 RAB11FIP3O75154 756 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 KIAA2012Q0VF49 1180 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 PUM3Q15397 648 aaKnown RBP18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 ATP2B3Q16720 1220 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 WASHC4Q2M389 1173 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 HSP90AB4PQ58FF6 505 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 TNNI3KQ59H18 835 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 SUPT20HQ8NEM7 779 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms