RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 CDC5LQ99459 802 aaKnown RBP17.91■□□□□ 0.46
COMMD3-208ENST00000470045 GREM2Q9H772 168 aa17.91■□□□□ 0.46
COMMD3-208ENST00000470045 SCN9AQ15858 1988 aa17.91■□□□□ 0.46
COMMD3-208ENST00000470045 C6orf229H3BNL8 230 aa17.89■□□□□ 0.45
COMMD3-208ENST00000470045 CSF1RP07333 972 aa17.89■□□□□ 0.45
COMMD3-208ENST00000470045 LMOD1P29536 600 aaPredicted RBP17.89■□□□□ 0.45
COMMD3-208ENST00000470045 HTRA3P83110 453 aa17.89■□□□□ 0.45
COMMD3-208ENST00000470045 CIAPIN1Q6FI81 312 aa17.89■□□□□ 0.45
COMMD3-208ENST00000470045 MRPL50Q8N5N7 158 aaKnown RBP17.89■□□□□ 0.45
COMMD3-208ENST00000470045 CDCA7LQ96GN5 454 aa17.89■□□□□ 0.45
COMMD3-208ENST00000470045 EYA3Q99504 573 aa17.89■□□□□ 0.45
COMMD3-208ENST00000470045 XDHP47989 1333 aa17.89■□□□□ 0.45
COMMD3-208ENST00000470045 PASKQ96RG2 1323 aa17.89■□□□□ 0.45
COMMD3-208ENST00000470045 EPS15P42566 896 aa17.88■□□□□ 0.45
COMMD3-208ENST00000470045 EAPPQ56P03 285 aaPredicted RBP17.88■□□□□ 0.45
COMMD3-208ENST00000470045 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
COMMD3-208ENST00000470045 GPRC5DQ9NZD1 345 aa17.88■□□□□ 0.45
COMMD3-208ENST00000470045 ZNF646O15015 1829 aaPredicted RBP17.88■□□□□ 0.45
COMMD3-208ENST00000470045 ALDH1L1O75891 902 aa17.87■□□□□ 0.45
COMMD3-208ENST00000470045 UFL1O94874 794 aa17.87■□□□□ 0.45
COMMD3-208ENST00000470045 TNIP1Q15025 636 aa17.87■□□□□ 0.45
COMMD3-208ENST00000470045 GPR101Q96P66 508 aaPredicted RBP17.87■□□□□ 0.45
COMMD3-208ENST00000470045 ANKIB1Q9P2G1 1089 aa17.87■□□□□ 0.45
COMMD3-208ENST00000470045 GGA1Q9UJY5 639 aa17.87■□□□□ 0.45
COMMD3-208ENST00000470045 RIMBP2O15034 1052 aa17.86■□□□□ 0.45
COMMD3-208ENST00000470045 RAD17O75943 681 aa17.86■□□□□ 0.45
COMMD3-208ENST00000470045 ITGBL1O95965 494 aaPredicted RBP17.86■□□□□ 0.45
COMMD3-208ENST00000470045 GMPSP49915 693 aaPredicted RBP17.86■□□□□ 0.45
COMMD3-208ENST00000470045 FOXO4P98177 505 aa17.86■□□□□ 0.45
COMMD3-208ENST00000470045 FAM161AQ3B820 660 aa17.86■□□□□ 0.45
COMMD3-208ENST00000470045 SSH1Q8WYL5 1049 aa17.86■□□□□ 0.45
COMMD3-208ENST00000470045 DBNDD1Q9H9R9 158 aa17.86■□□□□ 0.45
COMMD3-208ENST00000470045 PTPRCP08575 1304 aa17.86■□□□□ 0.45
COMMD3-208ENST00000470045 ZNF609O15014 1411 aa17.86■□□□□ 0.45
COMMD3-208ENST00000470045 GRM8O00222 908 aa17.85■□□□□ 0.45
COMMD3-208ENST00000470045 ECE2O60344 883 aa17.85■□□□□ 0.45
COMMD3-208ENST00000470045 ABCB7O75027 752 aa17.85■□□□□ 0.45
COMMD3-208ENST00000470045 ITGA6P23229 1130 aa17.85■□□□□ 0.45
COMMD3-208ENST00000470045 ALDH1L2Q3SY69 923 aa17.85■□□□□ 0.45
COMMD3-208ENST00000470045 USP50Q70EL3 339 aaPredicted RBP17.85■□□□□ 0.45
COMMD3-208ENST00000470045 KLRG1Q96E93 195 aa17.85■□□□□ 0.45
COMMD3-208ENST00000470045 SRCIN1Q9C0H9 1055 aa17.85■□□□□ 0.45
COMMD3-208ENST00000470045 ADARB2Q9NS39 739 aaKnown RBP17.85■□□□□ 0.45
COMMD3-208ENST00000470045 MINPP1Q9UNW1 487 aa17.85■□□□□ 0.45
COMMD3-208ENST00000470045 MED23Q9ULK4 1368 aa17.84■□□□□ 0.45
COMMD3-208ENST00000470045 ATP2B4P23634 1241 aa17.84■□□□□ 0.45
COMMD3-208ENST00000470045 ZC3H12CQ9C0D7 883 aaKnown RBP17.84■□□□□ 0.45
COMMD3-208ENST00000470045 TRPM7Q96QT4 1865 aa17.84■□□□□ 0.45
COMMD3-208ENST00000470045 UTYO14607 1347 aa17.83■□□□□ 0.44
COMMD3-208ENST00000470045 PSMD14O00487 310 aa17.83■□□□□ 0.44
COMMD3-208ENST00000470045 CT47B1P0C2W7 299 aaPredicted RBP17.83■□□□□ 0.44
COMMD3-208ENST00000470045 IGHMBP2P38935 993 aaKnown RBP17.83■□□□□ 0.44
COMMD3-208ENST00000470045 DIEXFQ68CQ4 756 aaKnown RBP17.83■□□□□ 0.44
COMMD3-208ENST00000470045 SLC4A10Q6U841 1118 aa17.83■□□□□ 0.44
COMMD3-208ENST00000470045 CREBZFQ9NS37 354 aa17.83■□□□□ 0.44
COMMD3-208ENST00000470045 DOK7Q18PE1 504 aa17.82■□□□□ 0.44
COMMD3-208ENST00000470045 EPHA10Q5JZY3 1008 aa17.82■□□□□ 0.44
COMMD3-208ENST00000470045 MAP1SQ66K74 1059 aaPredicted RBP17.82■□□□□ 0.44
COMMD3-208ENST00000470045 MIER1Q8N108 512 aa17.82■□□□□ 0.44
COMMD3-208ENST00000470045 CNTROBQ8N137 903 aa17.82■□□□□ 0.44
COMMD3-208ENST00000470045 JMYQ8N9B5 988 aa17.82■□□□□ 0.44
COMMD3-208ENST00000470045 DPF2Q92785 391 aa17.82■□□□□ 0.44
COMMD3-208ENST00000470045 KCNQ5Q9NR82 932 aa17.82■□□□□ 0.44
COMMD3-208ENST00000470045 CLEC11AQ9Y240 323 aa17.82■□□□□ 0.44
COMMD3-208ENST00000470045 ANKRD18BA2A2Z9 1011 aa17.81■□□□□ 0.44
COMMD3-208ENST00000470045 CCT4P50991 539 aaKnown RBP17.81■□□□□ 0.44
COMMD3-208ENST00000470045 BCL2L13Q9BXK5 485 aa17.81■□□□□ 0.44
COMMD3-208ENST00000470045 C9orf78Q9NZ63 289 aaPredicted RBP17.81■□□□□ 0.44
COMMD3-208ENST00000470045 WTIPA6NIX2 430 aaPredicted RBP17.8■□□□□ 0.44
COMMD3-208ENST00000470045 VIL1P09327 827 aaKnown RBP17.8■□□□□ 0.44
COMMD3-208ENST00000470045 RPS12P25398 132 aaKnown RBP17.8■□□□□ 0.44
COMMD3-208ENST00000470045 LMBR1LQ6UX01 489 aa17.8■□□□□ 0.44
COMMD3-208ENST00000470045 KAZALD1Q96I82 304 aa17.8■□□□□ 0.44
COMMD3-208ENST00000470045 PGAP2Q9UHJ9 254 aa17.8■□□□□ 0.44
COMMD3-208ENST00000470045 LEMD3Q9Y2U8 911 aa17.8■□□□□ 0.44
COMMD3-208ENST00000470045 ZBTB12Q9Y330 459 aaPredicted RBP17.8■□□□□ 0.44
COMMD3-208ENST00000470045 SHTN1A0MZ66 631 aa17.79■□□□□ 0.44
COMMD3-208ENST00000470045 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
COMMD3-208ENST00000470045 IFIT5Q13325 482 aaKnown RBP17.79■□□□□ 0.44
COMMD3-208ENST00000470045 MICALL2Q8IY33 904 aa17.79■□□□□ 0.44
COMMD3-208ENST00000470045 MPHOSPH8Q99549 860 aa17.79■□□□□ 0.44
COMMD3-208ENST00000470045 ANKRD2Q9GZV1 360 aa17.79■□□□□ 0.44
COMMD3-208ENST00000470045 SMC4Q9NTJ3 1288 aa17.79■□□□□ 0.44
COMMD3-208ENST00000470045 CNOT7Q9UIV1 285 aaKnown RBP17.79■□□□□ 0.44
COMMD3-208ENST00000470045 NBPF7P0C2Y1 421 aaPredicted RBP17.78■□□□□ 0.44
COMMD3-208ENST00000470045 HIRAP54198 1017 aaPredicted RBP17.78■□□□□ 0.44
COMMD3-208ENST00000470045 PODNQ7Z5L7 613 aa17.78■□□□□ 0.44
COMMD3-208ENST00000470045 TRPM4Q8TD43 1214 aa17.78■□□□□ 0.44
COMMD3-208ENST00000470045 ZC3H15Q8WU90 426 aaKnown RBP17.78■□□□□ 0.44
COMMD3-208ENST00000470045 SUCLG2Q96I99 432 aa17.78■□□□□ 0.44
COMMD3-208ENST00000470045 TMEM88BA6NKF7 163 aa17.77■□□□□ 0.44
COMMD3-208ENST00000470045 CHRNDQ07001 517 aa17.77■□□□□ 0.44
COMMD3-208ENST00000470045 ZNF804BA4D1E1 1349 aa17.76■□□□□ 0.43
COMMD3-208ENST00000470045 IRS2Q9Y4H2 1338 aa17.76■□□□□ 0.43
COMMD3-208ENST00000470045 G3V3G9 751 aa17.76■□□□□ 0.43
COMMD3-208ENST00000470045 H7C1D1 291 aa17.76■□□□□ 0.43
COMMD3-208ENST00000470045 RABL6Q3YEC7 729 aaPredicted RBP17.76■□□□□ 0.43
COMMD3-208ENST00000470045 DCAF8Q5TAQ9 597 aa17.76■□□□□ 0.43
COMMD3-208ENST00000470045 TXNRD3Q86VQ6 643 aa17.76■□□□□ 0.43
COMMD3-208ENST00000470045 CHMP3Q9Y3E7 222 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms