RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 RABL6Q3YEC7 729 aaPredicted RBP12.33□□□□□ -0.44
PMF1-204ENST00000466489 CELF1Q92879 486 aaKnown RBP12.33□□□□□ -0.44
PMF1-204ENST00000466489 SEC31BQ9NQW1 1179 aa12.33□□□□□ -0.44
PMF1-204ENST00000466489 TNNQ9UQP3 1299 aa12.33□□□□□ -0.44
PMF1-204ENST00000466489 LRRFIP2Q9Y608 721 aaKnown RBP12.33□□□□□ -0.44
PMF1-204ENST00000466489 LTBP3Q9NS15 1303 aa12.33□□□□□ -0.44
PMF1-204ENST00000466489 SBF1O95248 1867 aa12.32□□□□□ -0.44
PMF1-204ENST00000466489 RLBP1P12271 317 aa12.32□□□□□ -0.44
PMF1-204ENST00000466489 FKBP4Q02790 459 aaKnown RBP eCLIP12.32□□□□□ -0.44
PMF1-204ENST00000466489 DPP8Q6V1X1 898 aaPredicted RBP12.32□□□□□ -0.44
PMF1-204ENST00000466489 MPNDQ8N594 471 aa12.32□□□□□ -0.44
PMF1-204ENST00000466489 IL27Q8NEV9 243 aa12.32□□□□□ -0.44
PMF1-204ENST00000466489 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
PMF1-204ENST00000466489 BSDC1Q9NW68 430 aaPredicted RBP12.32□□□□□ -0.44
PMF1-204ENST00000466489 ANKIB1Q9P2G1 1089 aa12.32□□□□□ -0.44
PMF1-204ENST00000466489 DICER1Q9UPY3 1922 aaKnown RBP12.32□□□□□ -0.44
PMF1-204ENST00000466489 LMNB1P20700 586 aa12.31□□□□□ -0.44
PMF1-204ENST00000466489 GSE1Q14687 1217 aa12.31□□□□□ -0.44
PMF1-204ENST00000466489 EPHA10Q5JZY3 1008 aa12.31□□□□□ -0.44
PMF1-204ENST00000466489 LDHAL6AQ6ZMR3 332 aa12.31□□□□□ -0.44
PMF1-204ENST00000466489 C7orf43Q8WVR3 580 aa12.31□□□□□ -0.44
PMF1-204ENST00000466489 PSMD1Q99460 953 aa12.31□□□□□ -0.44
PMF1-204ENST00000466489 ANKRD2Q9GZV1 360 aa12.31□□□□□ -0.44
PMF1-204ENST00000466489 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
PMF1-204ENST00000466489 XDHP47989 1333 aa12.31□□□□□ -0.44
PMF1-204ENST00000466489 KCNJ4P48050 445 aa12.3□□□□□ -0.44
PMF1-204ENST00000466489 ANKRD44Q8N8A2 993 aa12.3□□□□□ -0.44
PMF1-204ENST00000466489 EYA3Q99504 573 aa12.3□□□□□ -0.44
PMF1-204ENST00000466489 NSFL1CQ9UNZ2 370 aaKnown RBP12.3□□□□□ -0.44
PMF1-204ENST00000466489 TIAM2Q8IVF5 1701 aa12.29□□□□□ -0.44
PMF1-204ENST00000466489 GOLGB1Q14789 3259 aaKnown RBP12.29□□□□□ -0.44
PMF1-204ENST00000466489 ZBTB7BO15156 539 aaPredicted RBP12.29□□□□□ -0.44
PMF1-204ENST00000466489 SRGAP3O43295 1099 aa12.29□□□□□ -0.44
PMF1-204ENST00000466489 HMMRO75330 724 aa12.29□□□□□ -0.44
PMF1-204ENST00000466489 JDP2Q8WYK2 163 aa12.29□□□□□ -0.44
PMF1-204ENST00000466489 KAZALD1Q96I82 304 aa12.29□□□□□ -0.44
PMF1-204ENST00000466489 VPS33BQ9H267 617 aa12.29□□□□□ -0.44
PMF1-204ENST00000466489 RNF181Q9P0P0 153 aa12.29□□□□□ -0.44
PMF1-204ENST00000466489 GGA1Q9UJY5 639 aa12.29□□□□□ -0.44
PMF1-204ENST00000466489 FBXO3Q9UK99 471 aa12.29□□□□□ -0.44
PMF1-204ENST00000466489 ISY1Q9ULR0 285 aaKnown RBP12.29□□□□□ -0.44
PMF1-204ENST00000466489 ZC3H4Q9UPT8 1303 aaKnown RBP12.29□□□□□ -0.44
PMF1-204ENST00000466489 G3V3G9 751 aa12.28□□□□□ -0.44
PMF1-204ENST00000466489 C6orf229H3BNL8 230 aa12.28□□□□□ -0.44
PMF1-204ENST00000466489 RASSF7Q02833 373 aa12.28□□□□□ -0.44
PMF1-204ENST00000466489 MTX1Q13505 466 aa12.28□□□□□ -0.44
PMF1-204ENST00000466489 HDAC1Q13547 482 aaPredicted RBP12.28□□□□□ -0.44
PMF1-204ENST00000466489 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
PMF1-204ENST00000466489 MROH5Q6ZUA9 1318 aa12.28□□□□□ -0.44
PMF1-204ENST00000466489 NFKBIEO00221 500 aa12.27□□□□□ -0.45
PMF1-204ENST00000466489 PPIP5K2O43314 1243 aa12.27□□□□□ -0.45
PMF1-204ENST00000466489 UFL1O94874 794 aa12.27□□□□□ -0.45
PMF1-204ENST00000466489 ATP2B4P23634 1241 aa12.27□□□□□ -0.45
PMF1-204ENST00000466489 IARSP41252 1262 aaKnown RBP12.27□□□□□ -0.45
PMF1-204ENST00000466489 L1TD1Q5T7N2 865 aaKnown RBP12.27□□□□□ -0.45
PMF1-204ENST00000466489 C9orf131Q5VYM1 1079 aa12.27□□□□□ -0.45
PMF1-204ENST00000466489 OLFM4Q6UX06 510 aa12.27□□□□□ -0.45
PMF1-204ENST00000466489 LARGE2Q8N3Y3 721 aa12.27□□□□□ -0.45
PMF1-204ENST00000466489 RTFDC1Q9BY42 306 aaPredicted RBP12.27□□□□□ -0.45
PMF1-204ENST00000466489 ZC3H12CQ9C0D7 883 aaKnown RBP12.27□□□□□ -0.45
PMF1-204ENST00000466489 PODXL2Q9NZ53 605 aa12.27□□□□□ -0.45
PMF1-204ENST00000466489 MINPP1Q9UNW1 487 aa12.27□□□□□ -0.45
PMF1-204ENST00000466489 LEMD3Q9Y2U8 911 aa12.27□□□□□ -0.45
PMF1-204ENST00000466489 A0A1B0GUL6 1792 aa12.27□□□□□ -0.45
PMF1-204ENST00000466489 LTBP1Q14766 1721 aa12.26□□□□□ -0.45
PMF1-204ENST00000466489 GPSM2P81274 684 aa12.26□□□□□ -0.45
PMF1-204ENST00000466489 CHRNDQ07001 517 aa12.26□□□□□ -0.45
PMF1-204ENST00000466489 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
PMF1-204ENST00000466489 C8orf34Q49A92 452 aa12.26□□□□□ -0.45
PMF1-204ENST00000466489 METTL24Q5JXM2 366 aa12.26□□□□□ -0.45
PMF1-204ENST00000466489 C20orf194Q5TEA3 1177 aa12.26□□□□□ -0.45
PMF1-204ENST00000466489 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
PMF1-204ENST00000466489 NIM1KQ8IY84 436 aa12.26□□□□□ -0.45
PMF1-204ENST00000466489 ZNF594Q96JF6 807 aaPredicted RBP12.26□□□□□ -0.45
PMF1-204ENST00000466489 C1orf115Q9H7X2 142 aa12.26□□□□□ -0.45
PMF1-204ENST00000466489 ZNF277Q9NRM2 450 aaPredicted RBP12.26□□□□□ -0.45
PMF1-204ENST00000466489 EYA2O00167 538 aa12.25□□□□□ -0.45
PMF1-204ENST00000466489 CIAO1O76071 339 aa12.25□□□□□ -0.45
PMF1-204ENST00000466489 IL15P40933 162 aaPredicted RBP12.25□□□□□ -0.45
PMF1-204ENST00000466489 OS9Q13438 667 aaPredicted RBP12.25□□□□□ -0.45
PMF1-204ENST00000466489 TBC1D16Q8TBP0 767 aa12.25□□□□□ -0.45
PMF1-204ENST00000466489 COPRSQ9NQ92 184 aa12.25□□□□□ -0.45
PMF1-204ENST00000466489 ZBTB40Q9NUA8 1239 aa12.25□□□□□ -0.45
PMF1-204ENST00000466489 SNED1Q8TER0 1413 aa12.25□□□□□ -0.45
PMF1-204ENST00000466489 COL4A1P02462 1669 aa12.25□□□□□ -0.45
PMF1-204ENST00000466489 ZNF804BA4D1E1 1349 aa12.24□□□□□ -0.45
PMF1-204ENST00000466489 YY1P25490 414 aa12.24□□□□□ -0.45
PMF1-204ENST00000466489 EIF6P56537 245 aaKnown RBP12.24□□□□□ -0.45
PMF1-204ENST00000466489 ATP8B2P98198 1209 aa12.24□□□□□ -0.45
PMF1-204ENST00000466489 KIAA2012Q0VF49 1180 aa12.24□□□□□ -0.45
PMF1-204ENST00000466489 G3BP1Q13283 466 aaKnown RBP eCLIP12.24□□□□□ -0.45
PMF1-204ENST00000466489 HSP90AB4PQ58FF6 505 aa12.24□□□□□ -0.45
PMF1-204ENST00000466489 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
PMF1-204ENST00000466489 SIL1Q9H173 461 aa12.24□□□□□ -0.45
PMF1-204ENST00000466489 CEP126Q9P2H0 1117 aa12.24□□□□□ -0.45
PMF1-204ENST00000466489 DUOX1Q9NRD9 1551 aa12.23□□□□□ -0.45
PMF1-204ENST00000466489 MED23Q9ULK4 1368 aa12.23□□□□□ -0.45
PMF1-204ENST00000466489 RFX5P48382 616 aaPredicted RBP12.23□□□□□ -0.45
PMF1-204ENST00000466489 PTPN12Q05209 780 aaKnown RBP12.23□□□□□ -0.45
PMF1-204ENST00000466489 AOC3Q16853 763 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms