RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 BICC1Q9H694 974 aaKnown RBP10.19□□□□□ -0.78
UBE4B-205ENST00000465408 HACL1Q9UJ83 578 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 BRCA2P51587 3418 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 ITGB4P16144 1822 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 LAMB4A4D0S4 1761 aa10.19□□□□□ -0.78
UBE4B-205ENST00000465408 UTYO14607 1347 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 ERBB4Q15303 1308 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 ATP5J2-PTCD1G3V325 749 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 MX1P20591 662 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 OS9Q13438 667 aaPredicted RBP10.18□□□□□ -0.78
UBE4B-205ENST00000465408 MTX1Q13505 466 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 GCKRQ14397 625 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 TTLL7Q6ZT98 887 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 RHPN1Q8TCX5 695 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 PIGBQ92521 554 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 KAZALD1Q96I82 304 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 OSBPL3Q9H4L5 887 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 ASAP1Q9ULH1 1129 aa10.18□□□□□ -0.78
UBE4B-205ENST00000465408 PA2G4Q9UQ80 394 aaKnown RBP10.18□□□□□ -0.78
UBE4B-205ENST00000465408 CEP290O15078 2479 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 FER1L6Q2WGJ9 1857 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 UBR2Q8IWV8 1755 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 POLRMTO00411 1230 aaKnown RBP10.17□□□□□ -0.78
UBE4B-205ENST00000465408 TRAF5O00463 557 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 RFC4P35249 363 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 ATP6V1AP38606 617 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 EPHA10Q5JZY3 1008 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 SAPCD2Q86UD0 394 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 DNAJC10Q8IXB1 793 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 PLBD2Q8NHP8 589 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
UBE4B-205ENST00000465408 TBC1D2Q9BYX2 928 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 ATG3Q9NT62 314 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 VCANP13611 3396 aa10.17□□□□□ -0.78
UBE4B-205ENST00000465408 RBM25P49756 843 aaKnown RBP10.16□□□□□ -0.78
UBE4B-205ENST00000465408 PNMA8AQ86V59 439 aaPredicted RBP10.16□□□□□ -0.78
UBE4B-205ENST00000465408 KIF1BPQ96EK5 621 aa10.16□□□□□ -0.78
UBE4B-205ENST00000465408 ZBTB3Q9H5J0 574 aa10.16□□□□□ -0.78
UBE4B-205ENST00000465408 STAP2Q9UGK3 403 aa10.16□□□□□ -0.78
UBE4B-205ENST00000465408 SRP68Q9UHB9 627 aaKnown RBP10.16□□□□□ -0.78
UBE4B-205ENST00000465408 HDAC5Q9UQL6 1122 aa10.16□□□□□ -0.78
UBE4B-205ENST00000465408 TRPM7Q96QT4 1865 aa10.16□□□□□ -0.78
UBE4B-205ENST00000465408 ZNF541Q9H0D2 1346 aa10.15□□□□□ -0.78
UBE4B-205ENST00000465408 C21orf2O43822 256 aa10.15□□□□□ -0.78
UBE4B-205ENST00000465408 MAP4K4O95819 1239 aaPredicted RBP10.15□□□□□ -0.78
UBE4B-205ENST00000465408 HSP90AB4PQ58FF6 505 aa10.15□□□□□ -0.78
UBE4B-205ENST00000465408 ZNF330Q9Y3S2 320 aaPredicted RBP10.15□□□□□ -0.78
UBE4B-205ENST00000465408 AOX1Q06278 1338 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 LTBP3Q9NS15 1303 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 A0A087WZG4 1122 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 TRIM6-TRIM34B2RNG4 842 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 CASC1Q6TDU7 716 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 UBE3BQ7Z3V4 1068 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 SPRYD3Q8NCJ5 442 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 KLHDC4Q8TBB5 520 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 RILPL2Q969X0 211 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 OTUD5Q96G74 571 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 PRDM6Q9NQX0 595 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 SPTBN5Q9NRC6 3674 aaKnown RBP10.14□□□□□ -0.79
UBE4B-205ENST00000465408 ARFGEF2Q9Y6D5 1785 aa10.14□□□□□ -0.79
UBE4B-205ENST00000465408 G3BP1Q13283 466 aaKnown RBP eCLIP10.13□□□□□ -0.79
UBE4B-205ENST00000465408 RTL5Q5HYW3 569 aaPredicted RBP10.13□□□□□ -0.79
UBE4B-205ENST00000465408 ERC1Q8IUD2 1116 aa10.13□□□□□ -0.79
UBE4B-205ENST00000465408 PI4K2BQ8TCG2 481 aa10.13□□□□□ -0.79
UBE4B-205ENST00000465408 KIF2CQ99661 725 aa10.13□□□□□ -0.79
UBE4B-205ENST00000465408 SIL1Q9H173 461 aa10.13□□□□□ -0.79
UBE4B-205ENST00000465408 SLKQ9H2G2 1235 aaPredicted RBP10.13□□□□□ -0.79
UBE4B-205ENST00000465408 TAOK3Q9H2K8 898 aa10.13□□□□□ -0.79
UBE4B-205ENST00000465408 SAGE1Q9NXZ1 904 aa10.13□□□□□ -0.79
UBE4B-205ENST00000465408 ERC2O15083 957 aa10.12□□□□□ -0.79
UBE4B-205ENST00000465408 RPS6KA4O75676 772 aa10.12□□□□□ -0.79
UBE4B-205ENST00000465408 TM4SF1P30408 202 aa10.12□□□□□ -0.79
UBE4B-205ENST00000465408 CASP7P55210 303 aa10.12□□□□□ -0.79
UBE4B-205ENST00000465408 C2CD5Q86YS7 1000 aa10.12□□□□□ -0.79
UBE4B-205ENST00000465408 HSCBQ8IWL3 235 aa10.12□□□□□ -0.79
UBE4B-205ENST00000465408 HHIPL1Q96JK4 782 aa10.12□□□□□ -0.79
UBE4B-205ENST00000465408 SLC4A9Q96Q91 983 aa10.12□□□□□ -0.79
UBE4B-205ENST00000465408 USP26Q9BXU7 913 aa10.12□□□□□ -0.79
UBE4B-205ENST00000465408 CWC25Q9NXE8 425 aaPredicted RBP10.12□□□□□ -0.79
UBE4B-205ENST00000465408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.12□□□□□ -0.79
UBE4B-205ENST00000465408 USP42Q9H9J4 1324 aaKnown RBP10.11□□□□□ -0.79
UBE4B-205ENST00000465408 HTTP42858 3142 aa10.11□□□□□ -0.79
UBE4B-205ENST00000465408 POTEFA5A3E0 1075 aa10.11□□□□□ -0.79
UBE4B-205ENST00000465408 EIF5BO60841 1220 aaKnown RBP10.11□□□□□ -0.79
UBE4B-205ENST00000465408 TRPA1O75762 1119 aa10.11□□□□□ -0.79
UBE4B-205ENST00000465408 SASH1O94885 1247 aa10.11□□□□□ -0.79
UBE4B-205ENST00000465408 IFIT2P09913 472 aaKnown RBP10.11□□□□□ -0.79
UBE4B-205ENST00000465408 CHMLP26374 656 aa10.11□□□□□ -0.79
UBE4B-205ENST00000465408 RFX5P48382 616 aaPredicted RBP10.11□□□□□ -0.79
UBE4B-205ENST00000465408 NOGQ13253 232 aa10.11□□□□□ -0.79
UBE4B-205ENST00000465408 KIF6Q6ZMV9 814 aa10.11□□□□□ -0.79
UBE4B-205ENST00000465408 AACSQ86V21 672 aa10.11□□□□□ -0.79
UBE4B-205ENST00000465408 VSIG10Q8N0Z9 540 aa10.11□□□□□ -0.79
UBE4B-205ENST00000465408 CLASRPQ8N2M8 674 aaKnown RBP10.11□□□□□ -0.79
UBE4B-205ENST00000465408 ESYT1Q9BSJ8 1104 aa10.11□□□□□ -0.79
UBE4B-205ENST00000465408 TEX13AQ9BXU3 409 aaPredicted RBP10.11□□□□□ -0.79
UBE4B-205ENST00000465408 RNF186Q9NXI6 227 aa10.11□□□□□ -0.79
UBE4B-205ENST00000465408 AFDNP55196 1824 aaKnown RBP10.1□□□□□ -0.79
UBE4B-205ENST00000465408 H7C1W4 665 aa10.1□□□□□ -0.79
UBE4B-205ENST00000465408 STARD3NLO95772 234 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms