RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 STK32BQ9NY57 414 aa5.6□□□□□ -1.51
VPS72-203ENST00000463470 ZDHHC9Q9Y397 364 aa5.6□□□□□ -1.51
VPS72-203ENST00000463470 SNX14Q9Y5W7 946 aa5.6□□□□□ -1.51
VPS72-203ENST00000463470 AK9Q5TCS8 1911 aa5.6□□□□□ -1.51
VPS72-203ENST00000463470 COL24A1Q17RW2 1714 aa5.6□□□□□ -1.51
VPS72-203ENST00000463470 ELP1O95163 1332 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 PNPLA7Q6ZV29 1317 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 NEURL1BA8MQ27 555 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 CASTP20810 708 aaKnown RBP5.59□□□□□ -1.51
VPS72-203ENST00000463470 PRIM1P49642 420 aaKnown RBP5.59□□□□□ -1.51
VPS72-203ENST00000463470 CABP4P57796 275 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 NECTIN1Q15223 517 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 RABL6Q3YEC7 729 aaPredicted RBP5.59□□□□□ -1.51
VPS72-203ENST00000463470 ATL3Q6DD88 541 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 BLOC1S2Q6QNY1 142 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 GAS2L3Q86XJ1 694 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 PLBD2Q8NHP8 589 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 ZCRB1Q8TBF4 217 aaKnown RBP5.59□□□□□ -1.51
VPS72-203ENST00000463470 SLC16A10Q8TF71 515 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS72-203ENST00000463470 LLPHQ9BRT6 129 aaKnown RBP5.59□□□□□ -1.51
VPS72-203ENST00000463470 FHDC1Q9C0D6 1143 aaPredicted RBP5.59□□□□□ -1.51
VPS72-203ENST00000463470 PALD1Q9ULE6 856 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 NOL7Q9UMY1 257 aaKnown RBP5.59□□□□□ -1.51
VPS72-203ENST00000463470 RGPD5Q99666 1765 aa5.59□□□□□ -1.51
VPS72-203ENST00000463470 MRC1P22897 1456 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 PCDH11XQ9BZA7 1347 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 PCDH11YQ9BZA8 1340 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 GOLGA6L6A8MZA4 724 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 CYP27B1O15528 508 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 ZNF500O60304 480 aaPredicted RBP5.58□□□□□ -1.52
VPS72-203ENST00000463470 F13A1P00488 732 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 SYT1P21579 422 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 YY1P25490 414 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 IL15P40933 162 aaPredicted RBP5.58□□□□□ -1.52
VPS72-203ENST00000463470 AK2P54819 239 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 KRT85P78386 507 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 PDIA6Q15084 440 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 CREB3L3Q68CJ9 461 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 MTERF4Q7Z6M4 381 aaKnown RBP5.58□□□□□ -1.52
VPS72-203ENST00000463470 GPT2Q8TD30 523 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 JAKMIP1Q96N16 626 aaKnown RBP5.58□□□□□ -1.52
VPS72-203ENST00000463470 FSD1Q9BTV5 496 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 PANK2Q9BZ23 570 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 UPF3BQ9BZI7 483 aaKnown RBP5.58□□□□□ -1.52
VPS72-203ENST00000463470 ZSCAN16Q9H4T2 348 aaPredicted RBP5.58□□□□□ -1.52
VPS72-203ENST00000463470 BICC1Q9H694 974 aaKnown RBP5.58□□□□□ -1.52
VPS72-203ENST00000463470 HELLSQ9NRZ9 838 aa5.58□□□□□ -1.52
VPS72-203ENST00000463470 SIPA1L3O60292 1781 aaPredicted RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 SHANK3Q9BYB0 1731 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 ABCC12Q96J65 1359 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 GOLGA6L4A6NEF3 574 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 KCNQ3O43525 872 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 OFD1O75665 1012 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 CIAO1O76071 339 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 SASH1O94885 1247 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 ZFYP08048 801 aaPredicted RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 PYGBP11216 843 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 CHRM1P11229 460 aaPredicted RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 HMGN5P82970 282 aaKnown RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 KIAA2012Q0VF49 1180 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 DHX8Q14562 1220 aaKnown RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 GLIPR1L2Q4G1C9 344 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 TNNI3KQ59H18 835 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 USPL1Q5W0Q7 1092 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 TSHZ3Q63HK5 1081 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 LARP1BQ659C4 914 aaKnown RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 PRPF40BQ6NWY9 871 aaKnown RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 COPS6Q7L5N1 327 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 USP48Q86UV5 1035 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 NFATC2IPQ8NCF5 419 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 CCDC191Q8NCU4 936 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 DDX54Q8TDD1 881 aaKnown RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 XAGE3Q8WTP9 111 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 EAF2Q96CJ1 260 aaPredicted RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 SUCLG2Q96I99 432 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 MAP7D2Q96T17 732 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 RRAGDQ9NQL2 400 aaPredicted RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 PODXL2Q9NZ53 605 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 PPP1R1BQ9UD71 204 aaPredicted RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 USP25Q9UHP3 1055 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 CTNNA3Q9UI47 895 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 CFAP45Q9UL16 551 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 AKAP2Q9Y2D5 859 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 RBM8AQ9Y5S9 174 aaKnown RBP5.57□□□□□ -1.52
VPS72-203ENST00000463470 FPGT-TNNI3KV9GXZ4 949 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 SCN11AQ9UI33 1791 aa5.57□□□□□ -1.52
VPS72-203ENST00000463470 RPAP1Q9BWH6 1393 aaPredicted RBP5.56□□□□□ -1.52
VPS72-203ENST00000463470 MED23Q9ULK4 1368 aa5.56□□□□□ -1.52
VPS72-203ENST00000463470 SH3TC1Q8TE82 1336 aa5.56□□□□□ -1.52
VPS72-203ENST00000463470 BTAF1O14981 1849 aa5.56□□□□□ -1.52
VPS72-203ENST00000463470 A0A087WZG4 1122 aa5.56□□□□□ -1.52
VPS72-203ENST00000463470 SYCE3A1L190 88 aa5.56□□□□□ -1.52
VPS72-203ENST00000463470 H7C1W4 665 aa5.56□□□□□ -1.52
VPS72-203ENST00000463470 SLC27A2O14975 620 aa5.56□□□□□ -1.52
VPS72-203ENST00000463470 CTAGE5O15320 804 aa5.56□□□□□ -1.52
VPS72-203ENST00000463470 DHX16O60231 1041 aaKnown RBP5.56□□□□□ -1.52
VPS72-203ENST00000463470 IGKV5-2P06315 115 aa5.56□□□□□ -1.52
VPS72-203ENST00000463470 CCDC192P0DO97 292 aa5.56□□□□□ -1.52
VPS72-203ENST00000463470 HSP90B1P14625 803 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms