RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 H7C1W4 665 aa11.21□□□□□ -0.61
SYN3-207ENST00000462268 GPSM2P81274 684 aa11.21□□□□□ -0.61
SYN3-207ENST00000462268 WASHC4Q2M389 1173 aa11.21□□□□□ -0.61
SYN3-207ENST00000462268 EAPPQ56P03 285 aaPredicted RBP11.21□□□□□ -0.61
SYN3-207ENST00000462268 CCDC85AQ96PX6 553 aaPredicted RBP11.21□□□□□ -0.61
SYN3-207ENST00000462268 PLA2G12BQ9BX93 195 aa11.21□□□□□ -0.61
SYN3-207ENST00000462268 PODXL2Q9NZ53 605 aa11.21□□□□□ -0.61
SYN3-207ENST00000462268 DDX60Q8IY21 1712 aaKnown RBP11.21□□□□□ -0.62
SYN3-207ENST00000462268 DICER1Q9UPY3 1922 aaKnown RBP11.2□□□□□ -0.62
SYN3-207ENST00000462268 TNIP1Q15025 636 aa11.2□□□□□ -0.62
SYN3-207ENST00000462268 CIAPIN1Q6FI81 312 aa11.2□□□□□ -0.62
SYN3-207ENST00000462268 TTLL11Q8NHH1 800 aa11.2□□□□□ -0.62
SYN3-207ENST00000462268 ANKIB1Q9P2G1 1089 aa11.2□□□□□ -0.62
SYN3-207ENST00000462268 GGA1Q9UJY5 639 aa11.2□□□□□ -0.62
SYN3-207ENST00000462268 LAMB2P55268 1798 aa11.2□□□□□ -0.62
SYN3-207ENST00000462268 CEP350Q5VT06 3117 aa11.2□□□□□ -0.62
SYN3-207ENST00000462268 XDHP47989 1333 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 LRRC37AA6NMS7 1700 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 F6X3S4 739 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 UFL1O94874 794 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 IGHMBP2P38935 993 aaKnown RBP11.19□□□□□ -0.62
SYN3-207ENST00000462268 SCNN1DP51172 638 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 CXCL9Q07325 125 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 SLFN5Q08AF3 891 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 BEND3Q5T5X7 828 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 TBC1D16Q8TBP0 767 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 GREM2Q9H772 168 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 POLLQ9UGP5 575 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 DUOX1Q9NRD9 1551 aa11.19□□□□□ -0.62
SYN3-207ENST00000462268 PTPRCP08575 1304 aa11.18□□□□□ -0.62
SYN3-207ENST00000462268 ALDH1L1O75891 902 aa11.18□□□□□ -0.62
SYN3-207ENST00000462268 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
SYN3-207ENST00000462268 ATP2B4P23634 1241 aa11.18□□□□□ -0.62
SYN3-207ENST00000462268 CASP7P55210 303 aa11.18□□□□□ -0.62
SYN3-207ENST00000462268 ZC3H12CQ9C0D7 883 aaKnown RBP11.18□□□□□ -0.62
SYN3-207ENST00000462268 BSDC1Q9NW68 430 aaPredicted RBP11.18□□□□□ -0.62
SYN3-207ENST00000462268 GPRC5DQ9NZD1 345 aa11.18□□□□□ -0.62
SYN3-207ENST00000462268 YDJCA8MPS7 323 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 G3V3G9 751 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 GRM8O00222 908 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 RAD17O75943 681 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 ITGA6P23229 1130 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 EPS15P42566 896 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 GMPSP49915 693 aaPredicted RBP11.17□□□□□ -0.62
SYN3-207ENST00000462268 FAM161AQ3B820 660 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 DCAF8Q5TAQ9 597 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 SLC4A10Q6U841 1118 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 USP50Q70EL3 339 aaPredicted RBP11.17□□□□□ -0.62
SYN3-207ENST00000462268 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 SRCIN1Q9C0H9 1055 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 DBNDD1Q9H9R9 158 aa11.17□□□□□ -0.62
SYN3-207ENST00000462268 ADARB2Q9NS39 739 aaKnown RBP11.17□□□□□ -0.62
SYN3-207ENST00000462268 ANKRD18BA2A2Z9 1011 aa11.16□□□□□ -0.62
SYN3-207ENST00000462268 ECE2O60344 883 aa11.16□□□□□ -0.62
SYN3-207ENST00000462268 CSF1RP07333 972 aa11.16□□□□□ -0.62
SYN3-207ENST00000462268 ALDH1L2Q3SY69 923 aa11.16□□□□□ -0.62
SYN3-207ENST00000462268 DIEXFQ68CQ4 756 aaKnown RBP11.16□□□□□ -0.62
SYN3-207ENST00000462268 MRPL50Q8N5N7 158 aaKnown RBP11.16□□□□□ -0.62
SYN3-207ENST00000462268 ZNF579Q8NAF0 562 aaKnown RBP11.16□□□□□ -0.62
SYN3-207ENST00000462268 KLRG1Q96E93 195 aa11.16□□□□□ -0.62
SYN3-207ENST00000462268 MPHOSPH8Q99549 860 aa11.16□□□□□ -0.62
SYN3-207ENST00000462268 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
SYN3-207ENST00000462268 C9orf78Q9NZ63 289 aaPredicted RBP11.16□□□□□ -0.62
SYN3-207ENST00000462268 COL4A1P02462 1669 aa11.16□□□□□ -0.62
SYN3-207ENST00000462268 CCDC88AQ3V6T2 1871 aa11.16□□□□□ -0.62
SYN3-207ENST00000462268 SCN4AP35499 1836 aa11.16□□□□□ -0.62
SYN3-207ENST00000462268 PASKQ96RG2 1323 aa11.15□□□□□ -0.62
SYN3-207ENST00000462268 RPS12P25398 132 aaKnown RBP11.15□□□□□ -0.62
SYN3-207ENST00000462268 HTRA3P83110 453 aa11.15□□□□□ -0.62
SYN3-207ENST00000462268 IFIT5Q13325 482 aaKnown RBP11.15□□□□□ -0.62
SYN3-207ENST00000462268 DOK7Q18PE1 504 aa11.15□□□□□ -0.62
SYN3-207ENST00000462268 CNTROBQ8N137 903 aa11.15□□□□□ -0.62
SYN3-207ENST00000462268 DNAJC5GQ8N7S2 189 aa11.15□□□□□ -0.62
SYN3-207ENST00000462268 SSH1Q8WYL5 1049 aa11.15□□□□□ -0.62
SYN3-207ENST00000462268 DPF2Q92785 391 aa11.15□□□□□ -0.62
SYN3-207ENST00000462268 CDCA7LQ96GN5 454 aa11.15□□□□□ -0.62
SYN3-207ENST00000462268 SMC4Q9NTJ3 1288 aa11.15□□□□□ -0.62
SYN3-207ENST00000462268 MINPP1Q9UNW1 487 aa11.15□□□□□ -0.62
SYN3-207ENST00000462268 MED23Q9ULK4 1368 aa11.15□□□□□ -0.63
SYN3-207ENST00000462268 H7C1D1 291 aa11.14□□□□□ -0.63
SYN3-207ENST00000462268 PSMD14O00487 310 aa11.14□□□□□ -0.63
SYN3-207ENST00000462268 MAP1SQ66K74 1059 aaPredicted RBP11.14□□□□□ -0.63
SYN3-207ENST00000462268 TRMT2AQ8IZ69 625 aaKnown RBP11.14□□□□□ -0.63
SYN3-207ENST00000462268 GPR101Q96P66 508 aaPredicted RBP11.14□□□□□ -0.63
SYN3-207ENST00000462268 ANKRD2Q9GZV1 360 aa11.14□□□□□ -0.63
SYN3-207ENST00000462268 LEMD3Q9Y2U8 911 aa11.14□□□□□ -0.63
SYN3-207ENST00000462268 CHMP3Q9Y3E7 222 aa11.14□□□□□ -0.63
SYN3-207ENST00000462268 LTBP1Q14766 1721 aa11.13□□□□□ -0.63
SYN3-207ENST00000462268 TMEM88BA6NKF7 163 aa11.13□□□□□ -0.63
SYN3-207ENST00000462268 ITGBL1O95965 494 aaPredicted RBP11.13□□□□□ -0.63
SYN3-207ENST00000462268 CCT4P50991 539 aaKnown RBP11.13□□□□□ -0.63
SYN3-207ENST00000462268 FOXO4P98177 505 aa11.13□□□□□ -0.63
SYN3-207ENST00000462268 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
SYN3-207ENST00000462268 TAF7LQ5H9L4 462 aa11.13□□□□□ -0.63
SYN3-207ENST00000462268 PODNQ7Z5L7 613 aa11.13□□□□□ -0.63
SYN3-207ENST00000462268 MICALL2Q8IY33 904 aa11.13□□□□□ -0.63
SYN3-207ENST00000462268 ZC3H15Q8WU90 426 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms