RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.79□□□□□ -0.36
SYN3-206ENST00000461446 TTLL11Q8NHH1 800 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 USP44Q9H0E7 712 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 GREM2Q9H772 168 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 C9orf78Q9NZ63 289 aaPredicted RBP12.79□□□□□ -0.36
SYN3-206ENST00000461446 POLLQ9UGP5 575 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 HACL1Q9UJ83 578 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 ZNRF3Q9ULT6 936 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 UTYO14607 1347 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 C6orf229H3BNL8 230 aa12.78□□□□□ -0.36
SYN3-206ENST00000461446 RIMBP2O15034 1052 aa12.78□□□□□ -0.36
SYN3-206ENST00000461446 RAD17O75943 681 aa12.78□□□□□ -0.36
SYN3-206ENST00000461446 EPHX2P34913 555 aa12.78□□□□□ -0.36
SYN3-206ENST00000461446 CXCL9Q07325 125 aa12.78□□□□□ -0.36
SYN3-206ENST00000461446 EAPPQ56P03 285 aaPredicted RBP12.78□□□□□ -0.36
SYN3-206ENST00000461446 TMEM57Q8N5G2 664 aa12.78□□□□□ -0.36
SYN3-206ENST00000461446 VPS33BQ9H267 617 aa12.78□□□□□ -0.36
SYN3-206ENST00000461446 LRRC37AA6NMS7 1700 aa12.78□□□□□ -0.36
SYN3-206ENST00000461446 SCN4AP35499 1836 aa12.77□□□□□ -0.37
SYN3-206ENST00000461446 YDJCA8MPS7 323 aa12.77□□□□□ -0.37
SYN3-206ENST00000461446 NBPF7P0C2Y1 421 aaPredicted RBP12.77□□□□□ -0.37
SYN3-206ENST00000461446 EPS15P42566 896 aa12.77□□□□□ -0.37
SYN3-206ENST00000461446 SCNN1DP51172 638 aa12.77□□□□□ -0.37
SYN3-206ENST00000461446 WASHC4Q2M389 1173 aa12.77□□□□□ -0.37
SYN3-206ENST00000461446 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
SYN3-206ENST00000461446 ANKRD18AQ8IVF6 992 aa12.77□□□□□ -0.37
SYN3-206ENST00000461446 DNAJC5GQ8N7S2 189 aa12.77□□□□□ -0.37
SYN3-206ENST00000461446 TBC1D16Q8TBP0 767 aa12.77□□□□□ -0.37
SYN3-206ENST00000461446 PLA2G12BQ9BX93 195 aa12.77□□□□□ -0.37
SYN3-206ENST00000461446 WTIPA6NIX2 430 aaPredicted RBP12.76□□□□□ -0.37
SYN3-206ENST00000461446 PDE3AQ14432 1141 aa12.76□□□□□ -0.37
SYN3-206ENST00000461446 DOK7Q18PE1 504 aa12.76□□□□□ -0.37
SYN3-206ENST00000461446 LDHDQ86WU2 507 aa12.76□□□□□ -0.37
SYN3-206ENST00000461446 PANK1Q8TE04 598 aa12.76□□□□□ -0.37
SYN3-206ENST00000461446 DBNDD1Q9H9R9 158 aa12.76□□□□□ -0.37
SYN3-206ENST00000461446 ANKIB1Q9P2G1 1089 aa12.76□□□□□ -0.37
SYN3-206ENST00000461446 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
SYN3-206ENST00000461446 LTBP1Q14766 1721 aa12.76□□□□□ -0.37
SYN3-206ENST00000461446 UFL1O94874 794 aa12.75□□□□□ -0.37
SYN3-206ENST00000461446 LMOD1P29536 600 aaPredicted RBP12.75□□□□□ -0.37
SYN3-206ENST00000461446 RRP1P56182 461 aaKnown RBP12.75□□□□□ -0.37
SYN3-206ENST00000461446 FOXO4P98177 505 aa12.75□□□□□ -0.37
SYN3-206ENST00000461446 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
SYN3-206ENST00000461446 CIAPIN1Q6FI81 312 aa12.75□□□□□ -0.37
SYN3-206ENST00000461446 KAZALD1Q96I82 304 aa12.75□□□□□ -0.37
SYN3-206ENST00000461446 SUCLG2Q96I99 432 aa12.75□□□□□ -0.37
SYN3-206ENST00000461446 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
SYN3-206ENST00000461446 KCNQ5Q9NR82 932 aa12.75□□□□□ -0.37
SYN3-206ENST00000461446 SHTN1A0MZ66 631 aa12.74□□□□□ -0.37
SYN3-206ENST00000461446 CSF1RP07333 972 aa12.74□□□□□ -0.37
SYN3-206ENST00000461446 UBTFL1P0CB47 393 aaPredicted RBP12.74□□□□□ -0.37
SYN3-206ENST00000461446 GMPSP49915 693 aaPredicted RBP12.74□□□□□ -0.37
SYN3-206ENST00000461446 C20orf194Q5TEA3 1177 aa12.74□□□□□ -0.37
SYN3-206ENST00000461446 MAP1SQ66K74 1059 aaPredicted RBP12.74□□□□□ -0.37
SYN3-206ENST00000461446 ITPRIPQ8IWB1 547 aa12.74□□□□□ -0.37
SYN3-206ENST00000461446 MEIS3Q99687 375 aa12.74□□□□□ -0.37
SYN3-206ENST00000461446 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
SYN3-206ENST00000461446 GGA1Q9UJY5 639 aa12.74□□□□□ -0.37
SYN3-206ENST00000461446 MYH3P11055 1940 aa12.74□□□□□ -0.37
SYN3-206ENST00000461446 RTL9Q8NET4 1388 aa12.73□□□□□ -0.37
SYN3-206ENST00000461446 ZBTB7BO15156 539 aaPredicted RBP12.73□□□□□ -0.37
SYN3-206ENST00000461446 ECE2O60344 883 aa12.73□□□□□ -0.37
SYN3-206ENST00000461446 GNAI3P08754 354 aa12.73□□□□□ -0.37
SYN3-206ENST00000461446 ITGA6P23229 1130 aa12.73□□□□□ -0.37
SYN3-206ENST00000461446 EPHA10Q5JZY3 1008 aa12.73□□□□□ -0.37
SYN3-206ENST00000461446 PNMA8AQ86V59 439 aaPredicted RBP12.73□□□□□ -0.37
SYN3-206ENST00000461446 EYA3Q99504 573 aa12.73□□□□□ -0.37
SYN3-206ENST00000461446 ZC3H12CQ9C0D7 883 aaKnown RBP12.73□□□□□ -0.37
SYN3-206ENST00000461446 BSDC1Q9NW68 430 aaPredicted RBP12.73□□□□□ -0.37
SYN3-206ENST00000461446 GPRC5DQ9NZD1 345 aa12.73□□□□□ -0.37
SYN3-206ENST00000461446 MINPP1Q9UNW1 487 aa12.73□□□□□ -0.37
SYN3-206ENST00000461446 HDAC5Q9UQL6 1122 aa12.73□□□□□ -0.37
SYN3-206ENST00000461446 COG6Q9Y2V7 657 aa12.73□□□□□ -0.37
SYN3-206ENST00000461446 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
SYN3-206ENST00000461446 XDHP47989 1333 aa12.72□□□□□ -0.37
SYN3-206ENST00000461446 PSMD14O00487 310 aa12.72□□□□□ -0.37
SYN3-206ENST00000461446 ITGBL1O95965 494 aaPredicted RBP12.72□□□□□ -0.37
SYN3-206ENST00000461446 MVPQ14764 893 aaKnown RBP12.72□□□□□ -0.37
SYN3-206ENST00000461446 TNIP1Q15025 636 aa12.72□□□□□ -0.37
SYN3-206ENST00000461446 RABL6Q3YEC7 729 aaPredicted RBP12.72□□□□□ -0.37
SYN3-206ENST00000461446 LMBR1LQ6UX01 489 aa12.72□□□□□ -0.37
SYN3-206ENST00000461446 CNTROBQ8N137 903 aa12.72□□□□□ -0.37
SYN3-206ENST00000461446 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
SYN3-206ENST00000461446 SUPT16HQ9Y5B9 1047 aaKnown RBP12.72□□□□□ -0.37
SYN3-206ENST00000461446 SPEF2Q9C093 1822 aa12.72□□□□□ -0.37
SYN3-206ENST00000461446 ADAMTSL1Q8N6G6 1762 aa12.71□□□□□ -0.37
SYN3-206ENST00000461446 PASKQ96RG2 1323 aa12.71□□□□□ -0.37
SYN3-206ENST00000461446 IGHMBP2P38935 993 aaKnown RBP12.71□□□□□ -0.37
SYN3-206ENST00000461446 BICC1Q9H694 974 aaKnown RBP12.71□□□□□ -0.37
SYN3-206ENST00000461446 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
SYN3-206ENST00000461446 G3V3G9 751 aa12.7□□□□□ -0.38
SYN3-206ENST00000461446 GNAI2P04899 355 aa12.7□□□□□ -0.38
SYN3-206ENST00000461446 ATP2B4P23634 1241 aa12.7□□□□□ -0.38
SYN3-206ENST00000461446 FMR1Q06787 632 aaKnown RBP eCLIP12.7□□□□□ -0.38
SYN3-206ENST00000461446 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
SYN3-206ENST00000461446 ANKRD44Q8N8A2 993 aa12.7□□□□□ -0.38
SYN3-206ENST00000461446 KLRG1Q96E93 195 aa12.7□□□□□ -0.38
SYN3-206ENST00000461446 ADARB2Q9NS39 739 aaKnown RBP12.7□□□□□ -0.38
SYN3-206ENST00000461446 CNOT7Q9UIV1 285 aaKnown RBP12.7□□□□□ -0.38
SYN3-206ENST00000461446 DDX19BQ9UMR2 479 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms